| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899025
Identifier: 159899025
GI number: 159899025
Start: 3201217
End: 3202578
Strand: Direct
Name: 159899025
Synonym: Haur_2506
Alternate gene names: NA
Gene position: 3201217-3202578 (Clockwise)
Preceding gene: 159899024
Following gene: 159899026
Centisome position: 50.44
GC content: 49.19
Gene sequence:
>1362_bases ATGTCTGCGTTTCCTTTACGTGAATTTGCTTCGACTGTTCAAGCATCCGTTGATAGTGGGCCACAATTTCCCAATGAACC AACGTCAATCGACGAAACTGGGCTTGGGATGGGTTTTATTGCCGATCTTGTTCTTAAAGTTATTTATTTCAATGGCACCA TTAGCGCCCAACGGATTTCTGAACAAACCTGCTTGCCCTACCTCAACGTCATCGACAAAGTTTTGCAATTTCTCAAAATG AGCGAATATGTCGATATCGTTGGGGCTGAACAAGGCTTTGGTGAACGCGCCTATCAATATGTCACGACACTTCAAGGCTC GCGCAAAGTCAACGAGGTATTAGAGCGCTCACAGTATGCTGGCCCAGCCCCTGTGCCGCTCGCTTCCTACATCGAGATGG TCAATCGCCAGTCAATCGGCGGCATGACGATCAATCAACAACGCATCCGCGAAGCCTTCAAGGATCTGGTGATCAACGAC GAGATGCTGGATAAAATTGGCCCTGCTGCCAACTCTGCCCGCTCGTTGTTCCTGTATGGCCCACCAGGCAATGGCAAAAC CACGATCGCCGAAGGTATCTCGCGCATTATGGGTGGCTCAGTGATGTTGCCCTATGCCGTTGAAATCGATGGTCAAGTGA TCAAGCTCTATGATCCCCTTAACCATAGCATTTTAACCAAACCCGAAATGCGCCAAGATGATACGCCCGCCCCATTCGGT GCGGTTGCCACCACCATGCCGCCAGCTCCCGACCGACGTTGGCTGCACTGCAAGCGCCCCCGCGTGATGGTTGGCGGTGA ACTGATTTTGGAACAATTAGAATTAATCTTCGATCCAATTTCCAAAGTCTATGAAGCACCCTACCAAATGAAGGCTAATG GTGGTTTGTTCCTGATCGACGACTTTGGGCGGCAACGCTGTCGGCCTGAAGAATTGCTGAACCGTTGGATTGTGCCACTC GAAAAGAAAATCGACTTTTTGGCCCTGCAAACTGGCAAAAAGATCGAAATTCCCTTCGATGTGTTGATCGTCTTTTCGAC CAACCTTGATCCCAAGGGCTTGGTCGATGATGCCTTCTTGCGGCGGATTCGGCATAAAATCGAGGTTGCCAACCCAACAC CCAACGAATATCGCGATATCTTCCGAATCGTTTGCAAAGCCAAGGGCGTGCCCTATAGCGATGATGGCTTGCGCTATTTG ATTCAGGAACACTATTTTAAAGTTAACCGTGAGTTGCGCTGCTGTCACCCACGCGATTTACTTGATCAGGTGCTTGATGA AGCGAAATATCGTGGTCAACAGCCCCAAATGAACAAAGAACTTTTGGATCGGGCTTGCGAAGCCTATTTTGTCAAAATGT AG
Upstream 100 bases:
>100_bases CTCAAGTATAATATTGATTATTGTTCATTCGGTGTGCGCAGATAGGGGAGATCTGCCAATCCCCGCCGATCTTAATTGTT GAAGCTCAGGAGATCACACG
Downstream 100 bases:
>100_bases CGAGGTCAAGTTATGTCACTTCTCAAACGTCTTGGAAGCACGCCAACAAGCCCAGAGCCAACTCCTCCTGCTCAGCCAGT TCAACCGATGGCTGGCGAAC
Product: AAA ATPase
Products: NA
Alternate protein names: ATPase; ATPase With Chaperone Activity; AAA+ Class ATPase With Chaperone Activity; ATPase Central Domain-Containing Protein; Aaa ATPase; ATPase Protein With Chaperone Activity; Chaperone ATPase; AAA Family ATPase; AAA ATPase Central Domain Protein; ATPase Chaperone Activity; ATPase With Chaperone Activity-Like Protein; AAA+ Class ATPase
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSAFPLREFASTVQASVDSGPQFPNEPTSIDETGLGMGFIADLVLKVIYFNGTISAQRISEQTCLPYLNVIDKVLQFLKM SEYVDIVGAEQGFGERAYQYVTTLQGSRKVNEVLERSQYAGPAPVPLASYIEMVNRQSIGGMTINQQRIREAFKDLVIND EMLDKIGPAANSARSLFLYGPPGNGKTTIAEGISRIMGGSVMLPYAVEIDGQVIKLYDPLNHSILTKPEMRQDDTPAPFG AVATTMPPAPDRRWLHCKRPRVMVGGELILEQLELIFDPISKVYEAPYQMKANGGLFLIDDFGRQRCRPEELLNRWIVPL EKKIDFLALQTGKKIEIPFDVLIVFSTNLDPKGLVDDAFLRRIRHKIEVANPTPNEYRDIFRIVCKAKGVPYSDDGLRYL IQEHYFKVNRELRCCHPRDLLDQVLDEAKYRGQQPQMNKELLDRACEAYFVKM
Sequences:
>Translated_453_residues MSAFPLREFASTVQASVDSGPQFPNEPTSIDETGLGMGFIADLVLKVIYFNGTISAQRISEQTCLPYLNVIDKVLQFLKM SEYVDIVGAEQGFGERAYQYVTTLQGSRKVNEVLERSQYAGPAPVPLASYIEMVNRQSIGGMTINQQRIREAFKDLVIND EMLDKIGPAANSARSLFLYGPPGNGKTTIAEGISRIMGGSVMLPYAVEIDGQVIKLYDPLNHSILTKPEMRQDDTPAPFG AVATTMPPAPDRRWLHCKRPRVMVGGELILEQLELIFDPISKVYEAPYQMKANGGLFLIDDFGRQRCRPEELLNRWIVPL EKKIDFLALQTGKKIEIPFDVLIVFSTNLDPKGLVDDAFLRRIRHKIEVANPTPNEYRDIFRIVCKAKGVPYSDDGLRYL IQEHYFKVNRELRCCHPRDLLDQVLDEAKYRGQQPQMNKELLDRACEAYFVKM >Mature_452_residues SAFPLREFASTVQASVDSGPQFPNEPTSIDETGLGMGFIADLVLKVIYFNGTISAQRISEQTCLPYLNVIDKVLQFLKMS EYVDIVGAEQGFGERAYQYVTTLQGSRKVNEVLERSQYAGPAPVPLASYIEMVNRQSIGGMTINQQRIREAFKDLVINDE MLDKIGPAANSARSLFLYGPPGNGKTTIAEGISRIMGGSVMLPYAVEIDGQVIKLYDPLNHSILTKPEMRQDDTPAPFGA VATTMPPAPDRRWLHCKRPRVMVGGELILEQLELIFDPISKVYEAPYQMKANGGLFLIDDFGRQRCRPEELLNRWIVPLE KKIDFLALQTGKKIEIPFDVLIVFSTNLDPKGLVDDAFLRRIRHKIEVANPTPNEYRDIFRIVCKAKGVPYSDDGLRYLI QEHYFKVNRELRCCHPRDLLDQVLDEAKYRGQQPQMNKELLDRACEAYFVKM
Specific function: Unknown
COG id: COG0606
COG function: function code O; Predicted ATPase with chaperone activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51235; Mature: 51104
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFPLREFASTVQASVDSGPQFPNEPTSIDETGLGMGFIADLVLKVIYFNGTISAQRIS CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH EQTCLPYLNVIDKVLQFLKMSEYVDIVGAEQGFGERAYQYVTTLQGSRKVNEVLERSQYA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC GPAPVPLASYIEMVNRQSIGGMTINQQRIREAFKDLVINDEMLDKIGPAANSARSLFLYG CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEC PPGNGKTTIAEGISRIMGGSVMLPYAVEIDGQVIKLYDPLNHSILTKPEMRQDDTPAPFG CCCCCCHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC AVATTMPPAPDRRWLHCKRPRVMVGGELILEQLELIFDPISKVYEAPYQMKANGGLFLID CHHCCCCCCCCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEE DFGRQRCRPEELLNRWIVPLEKKIDFLALQTGKKIEIPFDVLIVFSTNLDPKGLVDDAFL CCCCCCCCHHHHHHHCCCCHHHCCCEEEECCCCEEECCEEEEEEEECCCCCCCCHHHHHH RRIRHKIEVANPTPNEYRDIFRIVCKAKGVPYSDDGLRYLIQEHYFKVNRELRCCHPRDL HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH LDQVLDEAKYRGQQPQMNKELLDRACEAYFVKM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SAFPLREFASTVQASVDSGPQFPNEPTSIDETGLGMGFIADLVLKVIYFNGTISAQRIS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH EQTCLPYLNVIDKVLQFLKMSEYVDIVGAEQGFGERAYQYVTTLQGSRKVNEVLERSQYA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC GPAPVPLASYIEMVNRQSIGGMTINQQRIREAFKDLVINDEMLDKIGPAANSARSLFLYG CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEC PPGNGKTTIAEGISRIMGGSVMLPYAVEIDGQVIKLYDPLNHSILTKPEMRQDDTPAPFG CCCCCCHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC AVATTMPPAPDRRWLHCKRPRVMVGGELILEQLELIFDPISKVYEAPYQMKANGGLFLID CHHCCCCCCCCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEE DFGRQRCRPEELLNRWIVPLEKKIDFLALQTGKKIEIPFDVLIVFSTNLDPKGLVDDAFL CCCCCCCCHHHHHHHCCCCHHHCCCEEEECCCCEEECCEEEEEEEECCCCCCCCHHHHHH RRIRHKIEVANPTPNEYRDIFRIVCKAKGVPYSDDGLRYLIQEHYFKVNRELRCCHPRDL HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH LDQVLDEAKYRGQQPQMNKELLDRACEAYFVKM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA