| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is gpmA2 [H]
Identifier: 159898989
GI number: 159898989
Start: 3160306
End: 3160947
Strand: Reverse
Name: gpmA2 [H]
Synonym: Haur_2470
Alternate gene names: 159898989
Gene position: 3160947-3160306 (Counterclockwise)
Preceding gene: 159899004
Following gene: 159898987
Centisome position: 49.81
GC content: 49.22
Gene sequence:
>642_bases ATGCGGTTAATTTTGGTGCGTCACGGTGAGAGTGAGTGGAATAAAATCGGTCGCTATCAAGGCCAAGAAGATGCGCCCTT GAGCGAACTCGGCCAACAACAAGCCCAAGCCTTAGCCCAACGCCTCAAGCGCGAAAAGCTTGATGTGATTTACGCTAGCC CCTTGCAACGAGCCAACAACACCGCTCGCGCAATTGCCGAATTTCACCCCGAAGTACCATTTATCGACGAGCCAGCCTTG CTTGAAATTCATCATGGCGATTGGCAAGGGTTGTATAGCAACGATGTTAAGGCCCAATATGGCGCTGAATTACGCGAATG GCAATATTTCCCAACTCGTTCGCAAATGCCCAACGGCGAAAGCTTCTCGAACATCCTCAAGCGCGTTATTGACTTTAAAG AACGGGTTTTGAGCGAACGCCCCAACGAAACCGTGATTTTTTCAACTCACGATGTGGTTGTCAAAATTTTGGTTGCCGAT GCACTTGGCATCAATATGGATCGGATCAATCGCTTGTGGATTACCAATGCCTCAATTAGCGTGATCGAATATGGCGAAGA TTTGCCCTATTTGGTGAGCTTGAGCGAAGCTTGCCACCTTGGCAAATTGGCCACCGTGCGCGAAAACCAAACCGCCCTCT AA
Upstream 100 bases:
>100_bases CAACCATCTCAAACCAGCCAAAAGCTCAATGCAGATCTAGCTTGGAGGCTTCACTCATTTGCCTTCTGCCTTTTGCCTTT TGACTTTACTTGGAGGCTTT
Downstream 100 bases:
>100_bases AAAATGCCCTCACCCTCTAACTTCTCCACCAAAAGCCCCTCGCTCACCGCAGTGGGAGAGGGGTTGGGGTGAGGGCATGC CGATCCTTGAAATCGAATTT
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM 2; PGAM 2; Phosphoglyceromutase 2; dPGM 2 [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRLILVRHGESEWNKIGRYQGQEDAPLSELGQQQAQALAQRLKREKLDVIYASPLQRANNTARAIAEFHPEVPFIDEPAL LEIHHGDWQGLYSNDVKAQYGAELREWQYFPTRSQMPNGESFSNILKRVIDFKERVLSERPNETVIFSTHDVVVKILVAD ALGINMDRINRLWITNASISVIEYGEDLPYLVSLSEACHLGKLATVRENQTAL
Sequences:
>Translated_213_residues MRLILVRHGESEWNKIGRYQGQEDAPLSELGQQQAQALAQRLKREKLDVIYASPLQRANNTARAIAEFHPEVPFIDEPAL LEIHHGDWQGLYSNDVKAQYGAELREWQYFPTRSQMPNGESFSNILKRVIDFKERVLSERPNETVIFSTHDVVVKILVAD ALGINMDRINRLWITNASISVIEYGEDLPYLVSLSEACHLGKLATVRENQTAL >Mature_213_residues MRLILVRHGESEWNKIGRYQGQEDAPLSELGQQQAQALAQRLKREKLDVIYASPLQRANNTARAIAEFHPEVPFIDEPAL LEIHHGDWQGLYSNDVKAQYGAELREWQYFPTRSQMPNGESFSNILKRVIDFKERVLSERPNETVIFSTHDVVVKILVAD ALGINMDRINRLWITNASISVIEYGEDLPYLVSLSEACHLGKLATVRENQTAL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=245, Percent_Identity=26.9387755102041, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1786857, Length=200, Percent_Identity=29.5, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1790856, Length=188, Percent_Identity=29.7872340425532, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1786970, Length=218, Percent_Identity=28.8990825688073, Blast_Score=68, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71993390, Length=175, Percent_Identity=30.8571428571429, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17510917, Length=175, Percent_Identity=30.8571428571429, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322697, Length=218, Percent_Identity=29.3577981651376, Blast_Score=65, Evalue=7e-12, Organism=Drosophila melanogaster, GI28571815, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28571817, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24648979, Length=239, Percent_Identity=30.1255230125523, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646216, Length=106, Percent_Identity=40.5660377358491, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI85725270, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85725272, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650981, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24310; Mature: 24310
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILVRHGESEWNKIGRYQGQEDAPLSELGQQQAQALAQRLKREKLDVIYASPLQRANN CEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHCCH TARAIAEFHPEVPFIDEPALLEIHHGDWQGLYSNDVKAQYGAELREWQYFPTRSQMPNGE HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCH SFSNILKRVIDFKERVLSERPNETVIFSTHDVVVKILVADALGINMDRINRLWITNASIS HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCEEEEECCCEE VIEYGEDLPYLVSLSEACHLGKLATVRENQTAL EEECCCCCCHHHHHHHHHCCCCHHEECCCCCCC >Mature Secondary Structure MRLILVRHGESEWNKIGRYQGQEDAPLSELGQQQAQALAQRLKREKLDVIYASPLQRANN CEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHCCH TARAIAEFHPEVPFIDEPALLEIHHGDWQGLYSNDVKAQYGAELREWQYFPTRSQMPNGE HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCH SFSNILKRVIDFKERVLSERPNETVIFSTHDVVVKILVADALGINMDRINRLWITNASIS HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCEEEEECCCEE VIEYGEDLPYLVSLSEACHLGKLATVRENQTAL EEECCCCCCHHHHHHHHHCCCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]