| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is chiA1 [H]
Identifier: 159898985
GI number: 159898985
Start: 3147967
End: 3153630
Strand: Reverse
Name: chiA1 [H]
Synonym: Haur_2466
Alternate gene names: 159898985
Gene position: 3153630-3147967 (Counterclockwise)
Preceding gene: 159898987
Following gene: 159898978
Centisome position: 49.69
GC content: 53.81
Gene sequence:
>5664_bases ATGATGGACTCAGCAACGCTCTCTCGGCATCGTATAGTTCGAACGATCACGCTGCTTATCCTCACAAGTTTTATCCTCGG TCTTTTTGCATTTACGCTTCAATCAACGGCTGCTCAAACTACTCCAACGGCCTCGGATAAGGCCTATGGTTGGTTGCAAG CGCAGCAGTTGCCAAATGGATTGGTCGATAGCTTCGAGCACGGGGGGGCTGCCGATGATCTGTGTGTGGTCTATGACCAG GCGGTGGCAGCGATCGCCTTTGTGGTCAAGGCTGATTATGATCGTGCTCGGGCGGTGCTGACCGCTTTGCGTGGCTCGCA ATGGGATGATGGCAGCTGGCACAACATTTATGCCTGTAGCAATCCCAATCAAGTGATGGAATGGCATCGCGATGTCGGGC CAGCGGTGTGGGTGGCCTTGGCAGTGGCGAGCTATGAAGCCGCAACCGGCGATCTGGTGACCTATCGCGAGATGGCGTTG CGAGCGGTGAACTTTGGCTTTGGCTTTCAGCAGGATGATGGCGGGGTGAATGGTGGCTTTGAGGCGACCCAACAAGGCTA TCGGTTCCACAGCTGGGGATCGACTGAGCATGCGATCGACCTCTATGCGGCGGCTCGCTATTTTTATGGCGATCAACCAC GCACTGGGCAGGTGAAGCAATTTCTTGAAACAGTCGTGTGGGATTCGGTCGATGGTCGTTGGTTGGGTGGTCGTGCCGAT CTGCGTGACCCATTGGATGTGAACACCTGGGGTGTGGCCGCGCTGGGCGACGAGTATATCATGGCGTTGGAGTATGCATT GGCAACGCATCGGGTGACCTTAGGCGGGATCGATGCGGTGGACTTCAACAGTGACCGCAATGATATTTGGTTTGAGGGCA CCGGCCAATTGATTGTAGCCTTGCAGGCGGTGGGCCGCACCAGCGACGCGCAGTATTTTCTGCAACAAATGGCGAAAGGT CAAAAGGCCAATGGGGGAATTCCCTATTCGTTGCAAGGAACGAACAACGGCTATTGGACAATGAGCACGGCGAATGCGGT GTCGAGCGCGGCCTGGTTGATTTTTGCTGATGCCGCGTTCAACCCGCTCGGTGTAGGCACAGCCACGATCACGAGTGTTG CGCCAACGCCTGATCCGGTGGTAGTGGAGCCGCCCGTAAGTGCCTCGGATAAGGCCTATGGCTGGTTGCGCTCACAGCAA TTGGCGAATGGCTTGGTCGATAGCTTCGAGCACGGGGGGGCTGCCGATGATCTGTGTGTGGTCTATGATCAAGCGGTGGC AGCGATCGCCTTTGTAGTGAAAGCCGATTACGATCGTGCTCGTGCCGTATTGACCGCCTTGCGTGGCTCGCAATGGGGTG ATGGCAGTTGGCACAACATTTATGCCTGTAGCAATCCCAACCAAGTGATGGAATGGCATCGCGATGTCGGGCCAGCGGTG TGGGTGGCCTTGGCAGTGGCGAGCTATGAAGCCGCAACCGGCGATCTGGTGACCTATCGCGAGATGGCGTTGCGAGCGGT GAACTTTGGCTTTGGCTTTCAGCAAGATGATGGCGGGGTAAATGGTGGGTTTGAGGCAACGCAACAAGGCTATCGGTTCC ACAGCTGGGGATCGACTGAGCATGCGATCGACCTGTATGCGGCAGCCCGCTATTTTTATGGTGATCAACCGCGCACCGGG CAGGTGAAGCAGTTTCTTGAAACGGTGGTGTGGGAAGCCGCCAAAGGTCGTTGGCTGGGTGGCCGTGCCGATCAGCGTGA CCCGTTGGATGTGAACACCTGGGGCGTGGCTGCACTGGGCGACGAGTATATCATGGCCTTGGAGTATGCATTAGGCACGC ATCGGGTAACCTTGGGCGGAATCGATGCGATGGATTTCAACAGCGACCGCAATGATATCTGGTTTGAGGGCACTGGCCAA TTGATTGTAGCGTTGCATGCGGTGGGCCGCACCAGCGACGCGCAGTATTTTCTGCAACAGATGGCGAAGGGCCAAACGGC GAATGGGGGCATCCCCTATTCGTTGCAAGGGACGAATAATGGCTATTGGACGATGAGTACGGCGAATGCGGTATCGAGCG CGGCCTGGTTGATTTTTGCTGATGCCGCGTTCAATCCGCTCGGTTTAGGCACGGCGACGATCACGAGTGTTGCGCCAACG CCTGATCCGGTGGTGGTGGAACCGCCCGTAAGTGCCTCGGATAAGGCCTACGGCTGGTTGCGTTCACAGCAATTGCCAAA TGGCTTGGTCGATAGCTTCGAGCAAGGTGGGGCTGCCGATGATCTGTGTGTGGTGTACGACCAAGCGGTGGCGGCAATCG CCTTTGTGGTGAAAGCCGATTATGATCGTGCTCGGGCGGTGTTGACGGCTTTGCGAGGCTCGCAATGGGGCGATGGCAGT TGGCACAATATTTATGCTTGTAGCAATCCCAACCAAGTGATGGAATGGCATCGCGATGTCGGGCCAGCGGTGTGGGTGGC CTTGGCAGTGGCGAGCTATGAAGATGCGACGGGCGATCTGGTGACCTATCGCGAGATGGCGTTGCGAGCGGTGAACTTTG GCTTTGGCTTTCAGCAGGATGATGGTGGAGTCAATGGTGGCTTTGAGGCAACCCAACAAGGCTATCGGTTCCACAGTTGG GGATCGACTGAGCATGCGATCGACCTCTATGCGGCGGCTCGCTATTTTTATGGCGATCAACCGCGCATCGGGCAGGTAAA GCAGTTTCTCGAAACGGTGGTGTGGGAAGCCGCCAAAGGTCGTTGGCTGGGTGGCCGTGCCGATCAGCGTGACCCATTGG ATGTGAACACCTGGGGCGTGGCCGCACTAGGCGACGAGTATATCATGGCGTTGGAGTATGCATTAGGCACGCATCGGGTA ACCTTGGGCGGAATCGATGCGGTGGATTTCAACAGCGACCGCAATGATATCTGGTTTGAGGGCACTGGCCAATTGATTGT AGCGTTGCATGCGGTGGGTCGCACCAGCGATGCGGCGTATTTTCTGCACCAAATGGCGAAAGGCCAAACGGCGAATGGAG GAATTCCCTATTCGTTGCAAGGAACGAACAACGGCTATTGGACGATGAGTACGGCGAATGCGGTGTCGAGTGCCGCATGG TTGATTTTTGCCGATGCTGCCTTCAACCCGCTAGGCCTGATTGGTGATGATCAAGCACCAACTGCGCCTACCAATCTAAC AGCTTCGTTAATCACAGCGACAACTGCCCAGCTTGCATGGAACGCAGCGAATGACAATATTGGGGTTGAAGGCTATGCAG TGTATCTCAATAATGCTGCTACTCCCGCAACGGAATGTCGAGCCGTTCGGACAACTCAATGCACGTTGACCAGCCTCAAT CCCTTAACTACCTACAGCATTACGGTCAAGGCCTTTGATGCGGCAGGCAATGTTTCGCTTGCGAGTAATTCGATTAATAT AACTACACCTGATGTTGATCGGATTGCCCCGACGGCCCCGACCAATCTGAACGCTACCAATGTAACTGCTGCGAGTATCC TGCTTAGTTGGACGGCTTCGAGTGATAATGTTGGCGTGGTTGGCTACAATGCCTATCTTGGTACGAACCCAATTGCGGTT ACCAGTTGCAATGGCGTAATTACAACTGTATGTAACCTGACCGGACTTGCGCCTGATACGCAATACAGTATTACGGTCAA AGCCTTTGATGCGGCGGGCAATGCTTCGCTTGCAAGCAATAGCATCCTTGTGACAACCTTGATTGATACGCAAGCACCAA CGCCACCGTTAAATCTTCAGGTTCTCGCTAAAACCACCACGACGGTTGATATAAATTGGACGGCTTCAAGTGATAATGTT GGTGTGATTGGCTACAATGCCTATCTTGGTACTAACCCGATTGCAGTTACTAGTTGCAATGCTGTAACGGCAACCATGTG TAGCCTGACTGGACTTACGCCCAATACTCAATACAGCATTACGGTCAAAGCGTTTGATGCGGTGGGTAATGTTTCTGCTG CCAGCGATGGCTTGGTGGTTCGTACCAACCCATTACCAACCTTTGGTAATCCTTGGTATCTGCTTGATGGCGCTACGCAC ATCACGCCGAGCCAACTCAGTACAACCAGTGGCAATGCCGCCGCCAGCGATTCGATTCCAGCGGCGAGTGCAACTAACAT CGATGGTCAGGCGACTCAAACCATCAGCTATGAGGCCGAAAATCTCACGGCTAGCTACGATAGCAGCAAAACCACCGAGT TTGAGCTGTTTATTGATGCAGGCACGGCGGTTGGCAATGGTACACAAGCACGCATCGCCTACGATTTTACTGGCGATGGC ACGTGGGATCGGATTGAAACCTACAACTATTTTGCAACTGATCCGGTGAATAGTTGGGAACGTTATACCCATACTCGTGG ATTACGCTCGGCAACAGGCAGCTTTGCCAATTTGACCAATGGCAAGGTCAAGCTTGAGCTTTGGAATGCAATCGGCAATA ACCCATCGCTGATTCGCACGAATGCCAGCAGCGCCGATGGTCAGCAATCAACCTTGGTTTTGCCATTCTTGGTAACAACT GTTGATAACGAAGCTCCCACTGCGCCAACCAATCTGCTACGCGGTGTGACGACTGCTAACTCAGCAGCCTTTACTTGGCA AGCCGCAAGCGATAACGTTGGGGTCGTCGGTTATTCAGCCTACCTCAATGGTAGTCAGGTTGCCGTAGCAAATTGTCAGA TGGTCACAGGCCTCGGCTGTAATCTTACTGGCTTGAGTGCCAATACCAGTTATAGCGTGGTGGTCACGGCCTTTGATGCT GCTGGCAATCAATCCGAGGCTAGCGCAAGCATCACATTTACCACCTCCGACTTGGATTCGATTCAGCCAACAGCGCCAAC AAATGTTGCAATTGCCAACATAGGCGCTACCACGGCTACGGTCAGTTGGAATGCAGCGACTGATAATCTGGGGGTTGTTG GTTATTCAGTCTATCTGAATGGGGCAGATCAAGCGGCCAGCGGGTGCAGCATGGTTGATGCGTTGAACTGTACGCTGAGT GGCTTGAATGCTGACACTAGCTATACATTGGTGGTCACAGCCTTTGATGCTGCTGGCAATCAATCCGAGCCTAGCGCAAC TGTTACATTCACAACGCAGGCTAATCCATTTCGTTCGCAGTTGTATCTGCTTGATGGCGCTAGCCAAACCGCTGACGGAA TCTTGAGTGTGATTCCGGGTAATGCGGCAGATAGTGATCCGCTTGCGAGTGCCCAAAATGGCAACTGGGATGGGCTGCCA ACCAATGCTATCACCTATCAAATTAACGACCTGACGGCAACCTATGATCCTGCGAAAACCACTCAATTTAATCTCTACCT TGATGCAGGCATCGGCGTAGGCAACGCCAGCCAAGTGCGTGTTTCCTACGATTTTACTGGCGATGGCACGTGGGATCGGA TCGAAACCTATAACTATTTCGCGACTGATCCGGTGGTGGGCTGGGAACTATACAATCATACACGTGGGTTGCGCTCAGCA ACGGGCAGCTTTGCCAATTTGACCAATGGTAGACTGAAAGTCGAGCTTTGGAATGCAATTGGCAATGGTGGATCGCTTGT GCGAACGAGTGCCACCACGGCTGATGGCCAGCAATCGACGCTGACGCTGCCATTTAGCGAATAA
Upstream 100 bases:
>100_bases ACCTCACCTCTTTATCACCAACCATCGTGATCCGTGTTTAGCTGGCCCTTTTACCAACGACAAAACCAGATTCAGGATGT TCTGAATAAAAAGGAGACCA
Downstream 100 bases:
>100_bases CGCTTGTAACTGATCATCAAAGCCCTTCGTTATCGCCGTTATCGCGATAGGCGAAGGGCTTTTGCAGTTGCGGTTATTGT TGCGTTAAGAAAATTGGCGA
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1887; Mature: 1887
Protein sequence:
>1887_residues MMDSATLSRHRIVRTITLLILTSFILGLFAFTLQSTAAQTTPTASDKAYGWLQAQQLPNGLVDSFEHGGAADDLCVVYDQ AVAAIAFVVKADYDRARAVLTALRGSQWDDGSWHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEAATGDLVTYREMAL RAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTGQVKQFLETVVWDSVDGRWLGGRAD LRDPLDVNTWGVAALGDEYIMALEYALATHRVTLGGIDAVDFNSDRNDIWFEGTGQLIVALQAVGRTSDAQYFLQQMAKG QKANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGVGTATITSVAPTPDPVVVEPPVSASDKAYGWLRSQQ LANGLVDSFEHGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAV WVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTG QVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRVTLGGIDAMDFNSDRNDIWFEGTGQ LIVALHAVGRTSDAQYFLQQMAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLGTATITSVAPT PDPVVVEPPVSASDKAYGWLRSQQLPNGLVDSFEQGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGS WHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEDATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSW GSTEHAIDLYAAARYFYGDQPRIGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRV TLGGIDAVDFNSDRNDIWFEGTGQLIVALHAVGRTSDAAYFLHQMAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAW LIFADAAFNPLGLIGDDQAPTAPTNLTASLITATTAQLAWNAANDNIGVEGYAVYLNNAATPATECRAVRTTQCTLTSLN PLTTYSITVKAFDAAGNVSLASNSINITTPDVDRIAPTAPTNLNATNVTAASILLSWTASSDNVGVVGYNAYLGTNPIAV TSCNGVITTVCNLTGLAPDTQYSITVKAFDAAGNASLASNSILVTTLIDTQAPTPPLNLQVLAKTTTTVDINWTASSDNV GVIGYNAYLGTNPIAVTSCNAVTATMCSLTGLTPNTQYSITVKAFDAVGNVSAASDGLVVRTNPLPTFGNPWYLLDGATH ITPSQLSTTSGNAAASDSIPAASATNIDGQATQTISYEAENLTASYDSSKTTEFELFIDAGTAVGNGTQARIAYDFTGDG TWDRIETYNYFATDPVNSWERYTHTRGLRSATGSFANLTNGKVKLELWNAIGNNPSLIRTNASSADGQQSTLVLPFLVTT VDNEAPTAPTNLLRGVTTANSAAFTWQAASDNVGVVGYSAYLNGSQVAVANCQMVTGLGCNLTGLSANTSYSVVVTAFDA AGNQSEASASITFTTSDLDSIQPTAPTNVAIANIGATTATVSWNAATDNLGVVGYSVYLNGADQAASGCSMVDALNCTLS GLNADTSYTLVVTAFDAAGNQSEPSATVTFTTQANPFRSQLYLLDGASQTADGILSVIPGNAADSDPLASAQNGNWDGLP TNAITYQINDLTATYDPAKTTQFNLYLDAGIGVGNASQVRVSYDFTGDGTWDRIETYNYFATDPVVGWELYNHTRGLRSA TGSFANLTNGRLKVELWNAIGNGGSLVRTSATTADGQQSTLTLPFSE
Sequences:
>Translated_1887_residues MMDSATLSRHRIVRTITLLILTSFILGLFAFTLQSTAAQTTPTASDKAYGWLQAQQLPNGLVDSFEHGGAADDLCVVYDQ AVAAIAFVVKADYDRARAVLTALRGSQWDDGSWHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEAATGDLVTYREMAL RAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTGQVKQFLETVVWDSVDGRWLGGRAD LRDPLDVNTWGVAALGDEYIMALEYALATHRVTLGGIDAVDFNSDRNDIWFEGTGQLIVALQAVGRTSDAQYFLQQMAKG QKANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGVGTATITSVAPTPDPVVVEPPVSASDKAYGWLRSQQ LANGLVDSFEHGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAV WVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTG QVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRVTLGGIDAMDFNSDRNDIWFEGTGQ LIVALHAVGRTSDAQYFLQQMAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLGTATITSVAPT PDPVVVEPPVSASDKAYGWLRSQQLPNGLVDSFEQGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGS WHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEDATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSW GSTEHAIDLYAAARYFYGDQPRIGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRV TLGGIDAVDFNSDRNDIWFEGTGQLIVALHAVGRTSDAAYFLHQMAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAW LIFADAAFNPLGLIGDDQAPTAPTNLTASLITATTAQLAWNAANDNIGVEGYAVYLNNAATPATECRAVRTTQCTLTSLN PLTTYSITVKAFDAAGNVSLASNSINITTPDVDRIAPTAPTNLNATNVTAASILLSWTASSDNVGVVGYNAYLGTNPIAV TSCNGVITTVCNLTGLAPDTQYSITVKAFDAAGNASLASNSILVTTLIDTQAPTPPLNLQVLAKTTTTVDINWTASSDNV GVIGYNAYLGTNPIAVTSCNAVTATMCSLTGLTPNTQYSITVKAFDAVGNVSAASDGLVVRTNPLPTFGNPWYLLDGATH ITPSQLSTTSGNAAASDSIPAASATNIDGQATQTISYEAENLTASYDSSKTTEFELFIDAGTAVGNGTQARIAYDFTGDG TWDRIETYNYFATDPVNSWERYTHTRGLRSATGSFANLTNGKVKLELWNAIGNNPSLIRTNASSADGQQSTLVLPFLVTT VDNEAPTAPTNLLRGVTTANSAAFTWQAASDNVGVVGYSAYLNGSQVAVANCQMVTGLGCNLTGLSANTSYSVVVTAFDA AGNQSEASASITFTTSDLDSIQPTAPTNVAIANIGATTATVSWNAATDNLGVVGYSVYLNGADQAASGCSMVDALNCTLS GLNADTSYTLVVTAFDAAGNQSEPSATVTFTTQANPFRSQLYLLDGASQTADGILSVIPGNAADSDPLASAQNGNWDGLP TNAITYQINDLTATYDPAKTTQFNLYLDAGIGVGNASQVRVSYDFTGDGTWDRIETYNYFATDPVVGWELYNHTRGLRSA TGSFANLTNGRLKVELWNAIGNGGSLVRTSATTADGQQSTLTLPFSE >Mature_1887_residues MMDSATLSRHRIVRTITLLILTSFILGLFAFTLQSTAAQTTPTASDKAYGWLQAQQLPNGLVDSFEHGGAADDLCVVYDQ AVAAIAFVVKADYDRARAVLTALRGSQWDDGSWHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEAATGDLVTYREMAL RAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTGQVKQFLETVVWDSVDGRWLGGRAD LRDPLDVNTWGVAALGDEYIMALEYALATHRVTLGGIDAVDFNSDRNDIWFEGTGQLIVALQAVGRTSDAQYFLQQMAKG QKANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGVGTATITSVAPTPDPVVVEPPVSASDKAYGWLRSQQ LANGLVDSFEHGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAV WVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTG QVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRVTLGGIDAMDFNSDRNDIWFEGTGQ LIVALHAVGRTSDAQYFLQQMAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLGTATITSVAPT PDPVVVEPPVSASDKAYGWLRSQQLPNGLVDSFEQGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGS WHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEDATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSW GSTEHAIDLYAAARYFYGDQPRIGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRV TLGGIDAVDFNSDRNDIWFEGTGQLIVALHAVGRTSDAAYFLHQMAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAW LIFADAAFNPLGLIGDDQAPTAPTNLTASLITATTAQLAWNAANDNIGVEGYAVYLNNAATPATECRAVRTTQCTLTSLN PLTTYSITVKAFDAAGNVSLASNSINITTPDVDRIAPTAPTNLNATNVTAASILLSWTASSDNVGVVGYNAYLGTNPIAV TSCNGVITTVCNLTGLAPDTQYSITVKAFDAAGNASLASNSILVTTLIDTQAPTPPLNLQVLAKTTTTVDINWTASSDNV GVIGYNAYLGTNPIAVTSCNAVTATMCSLTGLTPNTQYSITVKAFDAVGNVSAASDGLVVRTNPLPTFGNPWYLLDGATH ITPSQLSTTSGNAAASDSIPAASATNIDGQATQTISYEAENLTASYDSSKTTEFELFIDAGTAVGNGTQARIAYDFTGDG TWDRIETYNYFATDPVNSWERYTHTRGLRSATGSFANLTNGKVKLELWNAIGNNPSLIRTNASSADGQQSTLVLPFLVTT VDNEAPTAPTNLLRGVTTANSAAFTWQAASDNVGVVGYSAYLNGSQVAVANCQMVTGLGCNLTGLSANTSYSVVVTAFDA AGNQSEASASITFTTSDLDSIQPTAPTNVAIANIGATTATVSWNAATDNLGVVGYSVYLNGADQAASGCSMVDALNCTLS GLNADTSYTLVVTAFDAAGNQSEPSATVTFTTQANPFRSQLYLLDGASQTADGILSVIPGNAADSDPLASAQNGNWDGLP TNAITYQINDLTATYDPAKTTQFNLYLDAGIGVGNASQVRVSYDFTGDGTWDRIETYNYFATDPVVGWELYNHTRGLRSA TGSFANLTNGRLKVELWNAIGNGGSLVRTSATTADGQQSTLTLPFSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 fibronectin type-III domains [H]
Homologues:
Organism=Homo sapiens, GI222537743, Length=712, Percent_Identity=22.0505617977528, Blast_Score=77, Evalue=2e-13, Organism=Homo sapiens, GI20127422, Length=313, Percent_Identity=27.7955271565495, Blast_Score=71, Evalue=1e-11, Organism=Homo sapiens, GI119220552, Length=320, Percent_Identity=26.5625, Blast_Score=71, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71997209, Length=316, Percent_Identity=24.0506329113924, Blast_Score=70, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR011583 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001223 - InterPro: IPR001579 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 [H]
Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 200604; Mature: 200604
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDSATLSRHRIVRTITLLILTSFILGLFAFTLQSTAAQTTPTASDKAYGWLQAQQLPNG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHCCCH LVDSFEHGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWDDGSWHNIYACS HHHHHCCCCCCCCEEEEHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEC NPNQVMEWHRDVGPAVWVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGF CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCC EATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTGQVKQFLETVVWDSVDGRWLGGRAD HHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC LRDPLDVNTWGVAALGDEYIMALEYALATHRVTLGGIDAVDFNSDRNDIWFEGTGQLIVA CCCCCCCCCCEEEECCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCCEEEECCCCEEEE LQAVGRTSDAQYFLQQMAKGQKANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAF EEHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECHHHHCCEEEEEEECCCC NPLGVGTATITSVAPTPDPVVVEPPVSASDKAYGWLRSQQLANGLVDSFEHGGAADDLCV CCCCCCCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAV EHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHH WVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCEEECCCCCC HAIDLYAAARYFYGDQPRTGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALG HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECC DEYIMALEYALGTHRVTLGGIDAMDFNSDRNDIWFEGTGQLIVALHAVGRTSDAQYFLQQ CCEEEEEEHHHCCEEEEECCCEEECCCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHH MAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLGTATITSVAPT HHCCCCCCCCCCEEEECCCCCEEEEECHHHHCCEEEEEEECCCCCCCCCCCEEEEECCCC PDPVVVEPPVSASDKAYGWLRSQQLPNGLVDSFEQGGAADDLCVVYDQAVAAIAFVVKAD CCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHEEECC YDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEDATGDL CHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC VTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQ HHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCC PRIGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRV CCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHCCEEE TLGGIDAVDFNSDRNDIWFEGTGQLIVALHAVGRTSDAAYFLHQMAKGQTANGGIPYSLQ EECCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE GTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLIGDDQAPTAPTNLTASLITATTAQLAW CCCCCEEEEECHHHHCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCHHHHHHEEHHEEE NAANDNIGVEGYAVYLNNAATPATECRAVRTTQCTLTSLNPLTTYSITVKAFDAAGNVSL ECCCCCCCCEEEEEEEECCCCCHHHHHEEEEEEEEEEECCCEEEEEEEEEEECCCCCEEE ASNSINITTPDVDRIAPTAPTNLNATNVTAASILLSWTASSDNVGVVGYNAYLGTNPIAV ECCEEEEECCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCEEE TSCNGVITTVCNLTGLAPDTQYSITVKAFDAAGNASLASNSILVTTLIDTQAPTPPLNLQ EECCCCEEEHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEE VLAKTTTTVDINWTASSDNVGVIGYNAYLGTNPIAVTSCNAVTATMCSLTGLTPNTQYSI EEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEE TVKAFDAVGNVSAASDGLVVRTNPLPTFGNPWYLLDGATHITPSQLSTTSGNAAASDSIP EEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC AASATNIDGQATQTISYEAENLTASYDSSKTTEFELFIDAGTAVGNGTQARIAYDFTGDG CCCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCC TWDRIETYNYFATDPVNSWERYTHTRGLRSATGSFANLTNGKVKLELWNAIGNNPSLIRT CCCEEEECEEEECCCCCHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEE NASSADGQQSTLVLPFLVTTVDNEAPTAPTNLLRGVTTANSAAFTWQAASDNVGVVGYSA CCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEE YLNGSQVAVANCQMVTGLGCNLTGLSANTSYSVVVTAFDAAGNQSEASASITFTTSDLDS EECCCEEEEEEEEEEECCCCCEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC IQPTAPTNVAIANIGATTATVSWNAATDNLGVVGYSVYLNGADQAASGCSMVDALNCTLS CCCCCCCCEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHEEEEE GLNADTSYTLVVTAFDAAGNQSEPSATVTFTTQANPFRSQLYLLDGASQTADGILSVIPG CCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECC NAADSDPLASAQNGNWDGLPTNAITYQINDLTATYDPAKTTQFNLYLDAGIGVGNASQVR CCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCEEEEEEEECCCCCCCCCEEE VSYDFTGDGTWDRIETYNYFATDPVVGWELYNHTRGLRSATGSFANLTNGRLKVELWNAI EEEEECCCCCCCEEEECEEEECCCEEEEEHHHHHCCHHHHCCCCCCCCCCEEEEEEEECC GNGGSLVRTSATTADGQQSTLTLPFSE CCCCCEEEEECCCCCCCCCEEEEECCC >Mature Secondary Structure MMDSATLSRHRIVRTITLLILTSFILGLFAFTLQSTAAQTTPTASDKAYGWLQAQQLPNG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHCCCH LVDSFEHGGAADDLCVVYDQAVAAIAFVVKADYDRARAVLTALRGSQWDDGSWHNIYACS HHHHHCCCCCCCCEEEEHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEC NPNQVMEWHRDVGPAVWVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGF CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCC EATQQGYRFHSWGSTEHAIDLYAAARYFYGDQPRTGQVKQFLETVVWDSVDGRWLGGRAD HHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC LRDPLDVNTWGVAALGDEYIMALEYALATHRVTLGGIDAVDFNSDRNDIWFEGTGQLIVA CCCCCCCCCCEEEECCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCCEEEECCCCEEEE LQAVGRTSDAQYFLQQMAKGQKANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAF EEHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECHHHHCCEEEEEEECCCC NPLGVGTATITSVAPTPDPVVVEPPVSASDKAYGWLRSQQLANGLVDSFEHGGAADDLCV CCCCCCCEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VYDQAVAAIAFVVKADYDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAV EHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHH WVALAVASYEAATGDLVTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCEEECCCCCC HAIDLYAAARYFYGDQPRTGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALG HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECC DEYIMALEYALGTHRVTLGGIDAMDFNSDRNDIWFEGTGQLIVALHAVGRTSDAQYFLQQ CCEEEEEEHHHCCEEEEECCCEEECCCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHH MAKGQTANGGIPYSLQGTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLGTATITSVAPT HHCCCCCCCCCCEEEECCCCCEEEEECHHHHCCEEEEEEECCCCCCCCCCCEEEEECCCC PDPVVVEPPVSASDKAYGWLRSQQLPNGLVDSFEQGGAADDLCVVYDQAVAAIAFVVKAD CCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHEEECC YDRARAVLTALRGSQWGDGSWHNIYACSNPNQVMEWHRDVGPAVWVALAVASYEDATGDL CHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC VTYREMALRAVNFGFGFQQDDGGVNGGFEATQQGYRFHSWGSTEHAIDLYAAARYFYGDQ HHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCC PRIGQVKQFLETVVWEAAKGRWLGGRADQRDPLDVNTWGVAALGDEYIMALEYALGTHRV CCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHCCEEE TLGGIDAVDFNSDRNDIWFEGTGQLIVALHAVGRTSDAAYFLHQMAKGQTANGGIPYSLQ EECCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE GTNNGYWTMSTANAVSSAAWLIFADAAFNPLGLIGDDQAPTAPTNLTASLITATTAQLAW CCCCCEEEEECHHHHCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCHHHHHHEEHHEEE NAANDNIGVEGYAVYLNNAATPATECRAVRTTQCTLTSLNPLTTYSITVKAFDAAGNVSL ECCCCCCCCEEEEEEEECCCCCHHHHHEEEEEEEEEEECCCEEEEEEEEEEECCCCCEEE ASNSINITTPDVDRIAPTAPTNLNATNVTAASILLSWTASSDNVGVVGYNAYLGTNPIAV ECCEEEEECCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCEEE TSCNGVITTVCNLTGLAPDTQYSITVKAFDAAGNASLASNSILVTTLIDTQAPTPPLNLQ EECCCCEEEHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEE VLAKTTTTVDINWTASSDNVGVIGYNAYLGTNPIAVTSCNAVTATMCSLTGLTPNTQYSI EEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCEEEE TVKAFDAVGNVSAASDGLVVRTNPLPTFGNPWYLLDGATHITPSQLSTTSGNAAASDSIP EEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC AASATNIDGQATQTISYEAENLTASYDSSKTTEFELFIDAGTAVGNGTQARIAYDFTGDG CCCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCC TWDRIETYNYFATDPVNSWERYTHTRGLRSATGSFANLTNGKVKLELWNAIGNNPSLIRT CCCEEEECEEEECCCCCHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEE NASSADGQQSTLVLPFLVTTVDNEAPTAPTNLLRGVTTANSAAFTWQAASDNVGVVGYSA CCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEE YLNGSQVAVANCQMVTGLGCNLTGLSANTSYSVVVTAFDAAGNQSEASASITFTTSDLDS EECCCEEEEEEEEEEECCCCCEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC IQPTAPTNVAIANIGATTATVSWNAATDNLGVVGYSVYLNGADQAASGCSMVDALNCTLS CCCCCCCCEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHEEEEE GLNADTSYTLVVTAFDAAGNQSEPSATVTFTTQANPFRSQLYLLDGASQTADGILSVIPG CCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECC NAADSDPLASAQNGNWDGLPTNAITYQINDLTATYDPAKTTQFNLYLDAGIGVGNASQVR CCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCEEEEEEEECCCCCCCCCEEE VSYDFTGDGTWDRIETYNYFATDPVVGWELYNHTRGLRSATGSFANLTNGRLKVELWNAI EEEEECCCCCCCEEEECEEEECCCEEEEEHHHHHCCHHHHCCCCCCCCCCEEEEEEEECC GNGGSLVRTSATTADGQQSTLTLPFSE CCCCCEEEEECCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2203782; 8103047 [H]