| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is muT4 [H]
Identifier: 159898949
GI number: 159898949
Start: 3112554
End: 3112997
Strand: Direct
Name: muT4 [H]
Synonym: Haur_2428
Alternate gene names: 159898949
Gene position: 3112554-3112997 (Clockwise)
Preceding gene: 159898945
Following gene: 159898952
Centisome position: 49.04
GC content: 49.77
Gene sequence:
>444_bases ATGAGCCAGATTCGCAAAAGTCGTATTGCTTATTCAGCCGGTGGTGTTTGCTATCGCTGGATGGATGAAGTGCCTGAGGT AGTGCTGATTGCGACCCATAACAGTACACGCTGGGGTTTGCCAAAAGGCCATCGTGAAGGTCGCGAAACCTTTGCCCAAG CAGCCCGCCGTGAAATAAACGAAGAAACTGGCTTACGCGGCGAAATCGTTTGCTCGCTTTCGGCAATTCAATATTGGTTT CGGGTTGAGAGCCATTTTGTGCATAAATGGGTCGAGTTTTTTCTGTTTCGCTGTACTGGCGGCTGTCTCAAGCCACAGCT TTCGGAAATCGACGATGCCCAGTGGTTTTTGTTACCCGATGCACTAGAGCAAATTAGCTTTCCGCGTGAGCGAAGCGTGC TCGAGGTGGTTAACACGATCTGGCGATCGAATCGTTTAATCTAG
Upstream 100 bases:
>100_bases AAGCAAAATCGAATACTTGTTCAGCAGCATTACGCTTGCTGAACGCCAGATGCGGGCGGCCCTAGGTCGGCTCGCATCTT GATACCTGATGGAGGCATGA
Downstream 100 bases:
>100_bases TTTGGGCAGCGGCTTGAGCCACATAACGCTCGGCAACAAGCGACCCATTTTTTGGGCTAAAGGCAAGCCAACAACGCTAA CCGTGGCTAGCCAGATAACC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSQIRKSRIAYSAGGVCYRWMDEVPEVVLIATHNSTRWGLPKGHREGRETFAQAARREINEETGLRGEIVCSLSAIQYWF RVESHFVHKWVEFFLFRCTGGCLKPQLSEIDDAQWFLLPDALEQISFPRERSVLEVVNTIWRSNRLI
Sequences:
>Translated_147_residues MSQIRKSRIAYSAGGVCYRWMDEVPEVVLIATHNSTRWGLPKGHREGRETFAQAARREINEETGLRGEIVCSLSAIQYWF RVESHFVHKWVEFFLFRCTGGCLKPQLSEIDDAQWFLLPDALEQISFPRERSVLEVVNTIWRSNRLI >Mature_146_residues SQIRKSRIAYSAGGVCYRWMDEVPEVVLIATHNSTRWGLPKGHREGRETFAQAARREINEETGLRGEIVCSLSAIQYWFR VESHFVHKWVEFFLFRCTGGCLKPQLSEIDDAQWFLLPDALEQISFPRERSVLEVVNTIWRSNRLI
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 17158; Mature: 17027
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIRKSRIAYSAGGVCYRWMDEVPEVVLIATHNSTRWGLPKGHREGRETFAQAARREIN CCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH EETGLRGEIVCSLSAIQYWFRVESHFVHKWVEFFLFRCTGGCLKPQLSEIDDAQWFLLPD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEECHH ALEQISFPRERSVLEVVNTIWRSNRLI HHHHCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQIRKSRIAYSAGGVCYRWMDEVPEVVLIATHNSTRWGLPKGHREGRETFAQAARREIN CCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH EETGLRGEIVCSLSAIQYWFRVESHFVHKWVEFFLFRCTGGCLKPQLSEIDDAQWFLLPD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEECHH ALEQISFPRERSVLEVVNTIWRSNRLI HHHHCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]