Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898932

Identifier: 159898932

GI number: 159898932

Start: 3073600

End: 3074349

Strand: Reverse

Name: 159898932

Synonym: Haur_2411

Alternate gene names: NA

Gene position: 3074349-3073600 (Counterclockwise)

Preceding gene: 159898942

Following gene: 159898931

Centisome position: 48.44

GC content: 52.67

Gene sequence:

>750_bases
ATGAACATATTTGATCGATTAAGCATGATTGGGTTGGGTTTGCAGGCCACCAAACAACTTTTTGCCCTCAGCGAACATGC
AACCGTTGACGATAGCGCCCTAGAATCAACTGACGCTGCCGATTTGCTGCCAGTTGGTGCATTGTTGGTGCCAGTTACCG
ATAGTTTGGTCAAGGTGGCGGTGCTGTATGGGCTGAGTGGCCTGAGTGCGTTGATGAATGCCAACTCAAGCAAAGCCGAG
ACCAAAGCAGGCTGGGGTGCGTTTCAAAAATCGCAGCTTAACGCAGGCCAAGTTTGGCGAATTCTCAGCTATAGTTTGGT
TCACCCGAGCTTCGCTGCGGCCCTTCGTGAAGGTGCTGCCGTCAGCATTTTGGGCACAGCAACCACCCGCTTCCAATCGT
TTAGTCTCGCCTTTTCAGCAGTACGGCTGGGTATTTTTGTGCCACTGCTGGTGACCGCGCCCCAAGCTGACGACGATGCT
GTGCTGACGAATATGTCTGGTTCTTCCTACTGTTTGTTGGGGGTCTTTTTGGCTTCGCTGGCAACCGATCGCCAGCGCTT
GACCTTCCGCTCGCAACAAGATGTCTTGGCTGCAACTGCTTTGGGTGTGCTTTGCTCGCAGATGTTATCGGGGCTGTTGC
AATCAAAAGGTTCTGCCCGCAAAGCTGGTTTGGCCTCGCTGGGCGCAGGAGTCATCAGCACCTTGATTATGCAGATCGTG
CGACGAGTTAACGCTAATAAACCTGAATAG

Upstream 100 bases:

>100_bases
ATCCCAAATCCTGTCCTTTGGTTTTGCCACTGGCAGATCAGCAATTTGATGACGTTAGTTGATTTAGCTAGCCAATCGAT
TGAGGAGTAGCAACAACAGC

Downstream 100 bases:

>100_bases
TCATAAATAATCCCAAAACCTAGTTTGGGAGACCAATAGGGTGCTCGCTAGGCAACGAAGCCGACGCTAGCGCCATGAAT
ATGCTTGCGCCATCTGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNIFDRLSMIGLGLQATKQLFALSEHATVDDSALESTDAADLLPVGALLVPVTDSLVKVAVLYGLSGLSALMNANSSKAE
TKAGWGAFQKSQLNAGQVWRILSYSLVHPSFAAALREGAAVSILGTATTRFQSFSLAFSAVRLGIFVPLLVTAPQADDDA
VLTNMSGSSYCLLGVFLASLATDRQRLTFRSQQDVLAATALGVLCSQMLSGLLQSKGSARKAGLASLGAGVISTLIMQIV
RRVNANKPE

Sequences:

>Translated_249_residues
MNIFDRLSMIGLGLQATKQLFALSEHATVDDSALESTDAADLLPVGALLVPVTDSLVKVAVLYGLSGLSALMNANSSKAE
TKAGWGAFQKSQLNAGQVWRILSYSLVHPSFAAALREGAAVSILGTATTRFQSFSLAFSAVRLGIFVPLLVTAPQADDDA
VLTNMSGSSYCLLGVFLASLATDRQRLTFRSQQDVLAATALGVLCSQMLSGLLQSKGSARKAGLASLGAGVISTLIMQIV
RRVNANKPE
>Mature_249_residues
MNIFDRLSMIGLGLQATKQLFALSEHATVDDSALESTDAADLLPVGALLVPVTDSLVKVAVLYGLSGLSALMNANSSKAE
TKAGWGAFQKSQLNAGQVWRILSYSLVHPSFAAALREGAAVSILGTATTRFQSFSLAFSAVRLGIFVPLLVTAPQADDDA
VLTNMSGSSYCLLGVFLASLATDRQRLTFRSQQDVLAATALGVLCSQMLSGLLQSKGSARKAGLASLGAGVISTLIMQIV
RRVNANKPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26048; Mature: 26048

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFDRLSMIGLGLQATKQLFALSEHATVDDSALESTDAADLLPVGALLVPVTDSLVKVA
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLYGLSGLSALMNANSSKAETKAGWGAFQKSQLNAGQVWRILSYSLVHPSFAAALREGAA
HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCE
VSILGTATTRFQSFSLAFSAVRLGIFVPLLVTAPQADDDAVLTNMSGSSYCLLGVFLASL
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHH
ATDRQRLTFRSQQDVLAATALGVLCSQMLSGLLQSKGSARKAGLASLGAGVISTLIMQIV
HCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRVNANKPE
HHHCCCCCC
>Mature Secondary Structure
MNIFDRLSMIGLGLQATKQLFALSEHATVDDSALESTDAADLLPVGALLVPVTDSLVKVA
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLYGLSGLSALMNANSSKAETKAGWGAFQKSQLNAGQVWRILSYSLVHPSFAAALREGAA
HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCE
VSILGTATTRFQSFSLAFSAVRLGIFVPLLVTAPQADDDAVLTNMSGSSYCLLGVFLASL
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHH
ATDRQRLTFRSQQDVLAATALGVLCSQMLSGLLQSKGSARKAGLASLGAGVISTLIMQIV
HCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRVNANKPE
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA