| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898904
Identifier: 159898904
GI number: 159898904
Start: 3035488
End: 3036912
Strand: Direct
Name: 159898904
Synonym: Haur_2383
Alternate gene names: NA
Gene position: 3035488-3036912 (Clockwise)
Preceding gene: 159898903
Following gene: 159898905
Centisome position: 47.83
GC content: 53.05
Gene sequence:
>1425_bases ATGAGTAGTTTGGAACAGCATGTTGATACGTTATTTGAGGATGGAGCAGCATTGTTAAATGGCAACCCGAGCCAAAAACT TGGCCAACAGTTAACATTTAATGGTTTAGCCACACCACCGCAATTGATTGCCCGTCGATTTTTGGGCAAGTTGGTTGATG TTTTAGTGCCGCCAGCCTTTACCGCGATCCTCAGTGGCCCGCAAGGTTTGCGGCGTTGCCTAACCAGTGGTAGCTACAAT CTTTGGGATATTCCGCGTGGTCCAGTAATGGTGCAATGGGTTTCGATGAGCCGTATGCGCCGCGAGATTGGGCCAATCGA AGGGTGGAGCGCCGATAAATGGCGTGTTCGCTTTACCGTCGTCGTTGATTTCGAGGTCTGCGATCCTTATCTGATTGCCA GCCATCAAGCCCCGCTAACCGTGCTTGAAGATGTAGTGCGGAGCGCTGCAATGCAGCAATTCGAGCGTATGAGCCACGAA GCCTTGACGGGCTATGATCCTGAGATTGGCGGGATTGATCGGCCTGCGCTGCGCATGTTTGAGCAATTGAGCCAAGAACC AGCTTTGGCTGGCCTGACCCTGATTCGCTTGCAAATTCTTGATCGAGCTGGCGATCTGCGACGGATTGAGGCGGCAACTG AAACTGCCGTTGCCATTGCCCAGCTTGAAGAATCAACCCGTTTGCAACGCGCCGAAGATCAAGCAGCCTTATTGACGATC GATGGGCAGGTGCTGCGCCAATCGGCGGAAGCAGCTTTGCGCATGGCCGCCACGATTGATGAAGGTCGCGAACAGCTTGC CCGCCATGATATTGCCGCCCAACGTCATGCGCTCAATGCCCAATTGCATGTGCTCGAAGCCAATATGCGGGCACAGGTGG CCGAAATTGCCCGCGAAGAGCAGGCTTGGCAACACGAACAACAACGCCTGATGCTGGAATGGCAAAGCCAAATTCAAGCC CAACAAAGCGAGCAAACCCACGATCAGCAGTATCAGATGTTGGATCTTCAGCATCGTTTTGAGGCTTTGCATGCCGAACG CGCTCATGAAGTTGAAGAACGTCGCCATCAACGCGAGCGTGAGTTGCGGGCTATGCAACAGCGCCATGAACAAGTATTAA TCAATCAGCGAGAACGGCTTGAACATTGGCGTTCGCAGCATGAACGCTCACTCCAACTAACCCAACAACAACATCAAGAG CAATTGGCCTTAATTCAGGGCACGACTACCATTGCCAGCCAAGCCGCTGGCTATTTGGCCCAATTTGGCATGCCAAGTCG GCGCATTGGGAGCAACGATTTGGCCCATGATCCAACGTTAATTGCTGGTGAAGGTTTGCGTAGCTTGCGCATGTTGCAAG AGCAATTACAACCCCAAATCACCGAGCCAGCCGCCCCAAGCGAGGCCAGCGATGCTAGCCATTGA
Upstream 100 bases:
>100_bases CGGCGAGCCTACAACCGCCTCGCCGATGCCCTCGCTTGGGAGGCACTCAGCGGAACCAAGGCCTTGGTGCAATGGGTCAA TACGCCACAGGAGCATCTGT
Downstream 100 bases:
>100_bases TTGCGCCAAGCAACACATTTGAATCTGCCAGCACTTTGGCATCCTGAGCATGGCGTGCTGTTTGAGCAGCGAGCAGTCTC GGTGGCGCGTTGGGTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSSLEQHVDTLFEDGAALLNGNPSQKLGQQLTFNGLATPPQLIARRFLGKLVDVLVPPAFTAILSGPQGLRRCLTSGSYN LWDIPRGPVMVQWVSMSRMRREIGPIEGWSADKWRVRFTVVVDFEVCDPYLIASHQAPLTVLEDVVRSAAMQQFERMSHE ALTGYDPEIGGIDRPALRMFEQLSQEPALAGLTLIRLQILDRAGDLRRIEAATETAVAIAQLEESTRLQRAEDQAALLTI DGQVLRQSAEAALRMAATIDEGREQLARHDIAAQRHALNAQLHVLEANMRAQVAEIAREEQAWQHEQQRLMLEWQSQIQA QQSEQTHDQQYQMLDLQHRFEALHAERAHEVEERRHQRERELRAMQQRHEQVLINQRERLEHWRSQHERSLQLTQQQHQE QLALIQGTTTIASQAAGYLAQFGMPSRRIGSNDLAHDPTLIAGEGLRSLRMLQEQLQPQITEPAAPSEASDASH
Sequences:
>Translated_474_residues MSSLEQHVDTLFEDGAALLNGNPSQKLGQQLTFNGLATPPQLIARRFLGKLVDVLVPPAFTAILSGPQGLRRCLTSGSYN LWDIPRGPVMVQWVSMSRMRREIGPIEGWSADKWRVRFTVVVDFEVCDPYLIASHQAPLTVLEDVVRSAAMQQFERMSHE ALTGYDPEIGGIDRPALRMFEQLSQEPALAGLTLIRLQILDRAGDLRRIEAATETAVAIAQLEESTRLQRAEDQAALLTI DGQVLRQSAEAALRMAATIDEGREQLARHDIAAQRHALNAQLHVLEANMRAQVAEIAREEQAWQHEQQRLMLEWQSQIQA QQSEQTHDQQYQMLDLQHRFEALHAERAHEVEERRHQRERELRAMQQRHEQVLINQRERLEHWRSQHERSLQLTQQQHQE QLALIQGTTTIASQAAGYLAQFGMPSRRIGSNDLAHDPTLIAGEGLRSLRMLQEQLQPQITEPAAPSEASDASH >Mature_473_residues SSLEQHVDTLFEDGAALLNGNPSQKLGQQLTFNGLATPPQLIARRFLGKLVDVLVPPAFTAILSGPQGLRRCLTSGSYNL WDIPRGPVMVQWVSMSRMRREIGPIEGWSADKWRVRFTVVVDFEVCDPYLIASHQAPLTVLEDVVRSAAMQQFERMSHEA LTGYDPEIGGIDRPALRMFEQLSQEPALAGLTLIRLQILDRAGDLRRIEAATETAVAIAQLEESTRLQRAEDQAALLTID GQVLRQSAEAALRMAATIDEGREQLARHDIAAQRHALNAQLHVLEANMRAQVAEIAREEQAWQHEQQRLMLEWQSQIQAQ QSEQTHDQQYQMLDLQHRFEALHAERAHEVEERRHQRERELRAMQQRHEQVLINQRERLEHWRSQHERSLQLTQQQHQEQ LALIQGTTTIASQAAGYLAQFGMPSRRIGSNDLAHDPTLIAGEGLRSLRMLQEQLQPQITEPAAPSEASDASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53710; Mature: 53579
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLEQHVDTLFEDGAALLNGNPSQKLGQQLTFNGLATPPQLIARRFLGKLVDVLVPPAF CCHHHHHHHHHHHCCCHHCCCCCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHH TAILSGPQGLRRCLTSGSYNLWDIPRGPVMVQWVSMSRMRREIGPIEGWSADKWRVRFTV HHHHCCHHHHHHHHHCCCCCEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEE VVDFEVCDPYLIASHQAPLTVLEDVVRSAAMQQFERMSHEALTGYDPEIGGIDRPALRMF EEEEECCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH EQLSQEPALAGLTLIRLQILDRAGDLRRIEAATETAVAIAQLEESTRLQRAEDQAALLTI HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE DGQVLRQSAEAALRMAATIDEGREQLARHDIAAQRHALNAQLHVLEANMRAQVAEIAREE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHH QAWQHEQQRLMLEWQSQIQAQQSEQTHDQQYQMLDLQHRFEALHAERAHEVEERRHQRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRAMQQRHEQVLINQRERLEHWRSQHERSLQLTQQQHQEQLALIQGTTTIASQAAGYLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QFGMPSRRIGSNDLAHDPTLIAGEGLRSLRMLQEQLQPQITEPAAPSEASDASH HCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSLEQHVDTLFEDGAALLNGNPSQKLGQQLTFNGLATPPQLIARRFLGKLVDVLVPPAF CHHHHHHHHHHHCCCHHCCCCCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHH TAILSGPQGLRRCLTSGSYNLWDIPRGPVMVQWVSMSRMRREIGPIEGWSADKWRVRFTV HHHHCCHHHHHHHHHCCCCCEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEE VVDFEVCDPYLIASHQAPLTVLEDVVRSAAMQQFERMSHEALTGYDPEIGGIDRPALRMF EEEEECCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH EQLSQEPALAGLTLIRLQILDRAGDLRRIEAATETAVAIAQLEESTRLQRAEDQAALLTI HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE DGQVLRQSAEAALRMAATIDEGREQLARHDIAAQRHALNAQLHVLEANMRAQVAEIAREE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHH QAWQHEQQRLMLEWQSQIQAQQSEQTHDQQYQMLDLQHRFEALHAERAHEVEERRHQRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRAMQQRHEQVLINQRERLEHWRSQHERSLQLTQQQHQEQLALIQGTTTIASQAAGYLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QFGMPSRRIGSNDLAHDPTLIAGEGLRSLRMLQEQLQPQITEPAAPSEASDASH HCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA