| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cdr [H]
Identifier: 159898867
GI number: 159898867
Start: 2993349
End: 2994998
Strand: Direct
Name: cdr [H]
Synonym: Haur_2346
Alternate gene names: 159898867
Gene position: 2993349-2994998 (Clockwise)
Preceding gene: 159898866
Following gene: 159898868
Centisome position: 47.16
GC content: 54.18
Gene sequence:
>1650_bases ATGAAAATTATGATTATCGGCGGGGTCGCTGCTGGCATGAGTGCCGCCACCCGCCTCCGTCGGCTCGACGAACATGCCGA GATTGTGGTGTTGGAACGCGGCGAGTATGTTTCGTATGCCAATTGTGGTTTGCCCTACCATATCGCTGGCACAATCGCTG AGCGCGAAAAGCTCTTAGTTGCCAGCCCTGAATATCTGCGCCAAACCTTTAATCTCGACCTACGCTTACAACACGAGGTG ATCGCCATCGATCCTCAGCAAAAAACTGTGACGATCAAAACACCCCAACAGCCCACGCCAATCCAAGAGCGCTACGATAA ATTGTTGATTGCGGTCGGCAGTCAAGCCTTACAATTGCCGATTCCTGGCAGCGATTTACCCCAAATTCACACAGTTCGCA CAATCCCCGATGTTGATCAGATCAATCAATTATTGGCTGATGGCGCAGGCCATGCGGTGGTCATCGGCGCTGGCTATATT GGCCTCGAAACGATTGAAGCCTTGCAACAGCGTGGCCTAACCGTCGAGCTAGTTGAGCTGGCCAAGCAAGTGTTGCCCTT GTTCGATCATGAGATGGTTAGCGAAGTTGCTGATTTGCTGCAACAACATGGGGTTAAATTGCATCTTGGGGCCAGCGCTC AACGCTTTGTACCAACCAACCAGCAAATCGCTGTACATCTCAGCGATGGGCGGCAGATCAAAACCGATCTGGTGATTATG GCGGTTGGGGTGCGGCCAGCCAGCCAATTAGCCCAAACCGCTGGCCTGACGCTTGGCGAACGTGGCGGCATCGCCGTCAA CCAGCATCTACAAACCTCCGACCCAGCGATTTATGCTGCTGGCGATGTGATTGAAGTGCAAGATACGGTGTTGCAACAAC CAGCCTTGATTGCGCTGGCGGGGCCGGCTAACCGCCAAGGCCGCATCGTGGCGGAGCATATGCTTGGGCGCAGCAGTCGC TATCATTCCAGCCAAGGCACGGCGATCGTCAAAGTGCATACAACCACTTGTGCCATGACCGGAGCCTCGGAAAAGAGCCT GCAACGCGCCCAACGCGCCTATCACAAAATCTATTTGCACCCCAATGATCACGCTGGCTACTACCCTGATGCTCAACCAA TGCATCTCAAGCTCTTATTTGCCCCTGCCGATGGGAGAATTCTAGGGGCGCAAATCGTTGGTGGCGCTGGCGTGGATAAA CGCATCGATGTCTTGGCGACGGCAATTCGCGCCAAAATGAGCGTCCACGACTTGACTGAGCTTGAGTTGGCCTATGCGCC GCCCTATGGCTCGGCCAAAGATCCCATTAACATGGCTGGATTTTTGGCCAGCAACCTGCTCGATGGCACGGTGAAATTCT GGTATGCCGAGGAATATCCCGCGATCACTGAGCATGCGCTGATCGTTGATGTGCGCAACCCTGATGAATATGCAGCGTGG CACATTCCAGAAGCGATAAATCTGCCGCTGGCTGAACTACGCACCGCGATTCCAAGCCTCAAAGCCCAAGCCGAAGGGCG ACCAATTCGCTTACACTGTATGGTTGGCATGCGCAGCTACATCGCCTACCGGATTTTGCGCCAAAGCGGCTTCACGAATG TGGCAACGCTAGCTGGTGGCGCATTGACCTTGAAGGCATTTGGTCATTAA
Upstream 100 bases:
>100_bases ATCCGCTGCCCAAACCCTGTTGTGAAGAATGTAACAAAATCGCTGCAAGCTGCATCAATTAAGTAGCAATCGATGTTGCC ATTTAAATTTGAGGCTTGTG
Downstream 100 bases:
>100_bases TCATTTTTAGCACCATAACCTTTTCGTTGCAAAACCCTGTTGCAGTGCAGCAGGGTTTTGTCTATCTCAAAATCCAGCAA ACAATCATCCAAGATCCATT
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MKIMIIGGVAAGMSAATRLRRLDEHAEIVVLERGEYVSYANCGLPYHIAGTIAEREKLLVASPEYLRQTFNLDLRLQHEV IAIDPQQKTVTIKTPQQPTPIQERYDKLLIAVGSQALQLPIPGSDLPQIHTVRTIPDVDQINQLLADGAGHAVVIGAGYI GLETIEALQQRGLTVELVELAKQVLPLFDHEMVSEVADLLQQHGVKLHLGASAQRFVPTNQQIAVHLSDGRQIKTDLVIM AVGVRPASQLAQTAGLTLGERGGIAVNQHLQTSDPAIYAAGDVIEVQDTVLQQPALIALAGPANRQGRIVAEHMLGRSSR YHSSQGTAIVKVHTTTCAMTGASEKSLQRAQRAYHKIYLHPNDHAGYYPDAQPMHLKLLFAPADGRILGAQIVGGAGVDK RIDVLATAIRAKMSVHDLTELELAYAPPYGSAKDPINMAGFLASNLLDGTVKFWYAEEYPAITEHALIVDVRNPDEYAAW HIPEAINLPLAELRTAIPSLKAQAEGRPIRLHCMVGMRSYIAYRILRQSGFTNVATLAGGALTLKAFGH
Sequences:
>Translated_549_residues MKIMIIGGVAAGMSAATRLRRLDEHAEIVVLERGEYVSYANCGLPYHIAGTIAEREKLLVASPEYLRQTFNLDLRLQHEV IAIDPQQKTVTIKTPQQPTPIQERYDKLLIAVGSQALQLPIPGSDLPQIHTVRTIPDVDQINQLLADGAGHAVVIGAGYI GLETIEALQQRGLTVELVELAKQVLPLFDHEMVSEVADLLQQHGVKLHLGASAQRFVPTNQQIAVHLSDGRQIKTDLVIM AVGVRPASQLAQTAGLTLGERGGIAVNQHLQTSDPAIYAAGDVIEVQDTVLQQPALIALAGPANRQGRIVAEHMLGRSSR YHSSQGTAIVKVHTTTCAMTGASEKSLQRAQRAYHKIYLHPNDHAGYYPDAQPMHLKLLFAPADGRILGAQIVGGAGVDK RIDVLATAIRAKMSVHDLTELELAYAPPYGSAKDPINMAGFLASNLLDGTVKFWYAEEYPAITEHALIVDVRNPDEYAAW HIPEAINLPLAELRTAIPSLKAQAEGRPIRLHCMVGMRSYIAYRILRQSGFTNVATLAGGALTLKAFGH >Mature_549_residues MKIMIIGGVAAGMSAATRLRRLDEHAEIVVLERGEYVSYANCGLPYHIAGTIAEREKLLVASPEYLRQTFNLDLRLQHEV IAIDPQQKTVTIKTPQQPTPIQERYDKLLIAVGSQALQLPIPGSDLPQIHTVRTIPDVDQINQLLADGAGHAVVIGAGYI GLETIEALQQRGLTVELVELAKQVLPLFDHEMVSEVADLLQQHGVKLHLGASAQRFVPTNQQIAVHLSDGRQIKTDLVIM AVGVRPASQLAQTAGLTLGERGGIAVNQHLQTSDPAIYAAGDVIEVQDTVLQQPALIALAGPANRQGRIVAEHMLGRSSR YHSSQGTAIVKVHTTTCAMTGASEKSLQRAQRAYHKIYLHPNDHAGYYPDAQPMHLKLLFAPADGRILGAQIVGGAGVDK RIDVLATAIRAKMSVHDLTELELAYAPPYGSAKDPINMAGFLASNLLDGTVKFWYAEEYPAITEHALIVDVRNPDEYAAW HIPEAINLPLAELRTAIPSLKAQAEGRPIRLHCMVGMRSYIAYRILRQSGFTNVATLAGGALTLKAFGH
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI226437568, Length=320, Percent_Identity=25.625, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI21389617, Length=320, Percent_Identity=25.625, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI65787454, Length=320, Percent_Identity=25.625, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI91199540, Length=351, Percent_Identity=26.7806267806268, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI22202629, Length=256, Percent_Identity=26.953125, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4757732, Length=257, Percent_Identity=26.8482490272374, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1789065, Length=318, Percent_Identity=29.2452830188679, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789765, Length=293, Percent_Identity=26.6211604095563, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788892, Length=182, Percent_Identity=32.4175824175824, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082354, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081717, Length=219, Percent_Identity=31.9634703196347, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786307, Length=305, Percent_Identity=25.2459016393443, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1789915, Length=324, Percent_Identity=22.5308641975309, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1787352, Length=259, Percent_Identity=26.6409266409266, Blast_Score=65, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17559934, Length=216, Percent_Identity=28.7037037037037, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI32565766, Length=298, Percent_Identity=27.8523489932886, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI24585130, Length=288, Percent_Identity=26.0416666666667, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI21358499, Length=305, Percent_Identity=28.1967213114754, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI281359715, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI281359713, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI24639250, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI18543267, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI24639252, Length=288, Percent_Identity=23.2638888888889, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI24639257, Length=288, Percent_Identity=23.2638888888889, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 59568; Mature: 59568
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMIIGGVAAGMSAATRLRRLDEHAEIVVLERGEYVSYANCGLPYHIAGTIAEREKLLV CEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEEHHCCCEEEE ASPEYLRQTFNLDLRLQHEVIAIDPQQKTVTIKTPQQPTPIQERYDKLLIAVGSQALQLP ECHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHEEEEECCCEEEEC IPGSDLPQIHTVRTIPDVDQINQLLADGAGHAVVIGAGYIGLETIEALQQRGLTVELVEL CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEHHHHH AKQVLPLFDHEMVSEVADLLQQHGVKLHLGASAQRFVPTNQQIAVHLSDGRQIKTDLVIM HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEE AVGVRPASQLAQTAGLTLGERGGIAVNQHLQTSDPAIYAAGDVIEVQDTVLQQPALIALA EECCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEHHHHHCCCCEEEEE GPANRQGRIVAEHMLGRSSRYHSSQGTAIVKVHTTTCAMTGASEKSLQRAQRAYHKIYLH CCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHEEEEEE PNDHAGYYPDAQPMHLKLLFAPADGRILGAQIVGGAGVDKRIDVLATAIRAKMSVHDLTE CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCE LELAYAPPYGSAKDPINMAGFLASNLLDGTVKFWYAEEYPAITEHALIVDVRNPDEYAAW EEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEE HIPEAINLPLAELRTAIPSLKAQAEGRPIRLHCMVGMRSYIAYRILRQSGFTNVATLAGG ECCHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHCCC ALTLKAFGH EEEEEECCC >Mature Secondary Structure MKIMIIGGVAAGMSAATRLRRLDEHAEIVVLERGEYVSYANCGLPYHIAGTIAEREKLLV CEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEEHHCCCEEEE ASPEYLRQTFNLDLRLQHEVIAIDPQQKTVTIKTPQQPTPIQERYDKLLIAVGSQALQLP ECHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHEEEEECCCEEEEC IPGSDLPQIHTVRTIPDVDQINQLLADGAGHAVVIGAGYIGLETIEALQQRGLTVELVEL CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEHHHHH AKQVLPLFDHEMVSEVADLLQQHGVKLHLGASAQRFVPTNQQIAVHLSDGRQIKTDLVIM HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEE AVGVRPASQLAQTAGLTLGERGGIAVNQHLQTSDPAIYAAGDVIEVQDTVLQQPALIALA EECCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEHHHHHCCCCEEEEE GPANRQGRIVAEHMLGRSSRYHSSQGTAIVKVHTTTCAMTGASEKSLQRAQRAYHKIYLH CCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHEEEEEE PNDHAGYYPDAQPMHLKLLFAPADGRILGAQIVGGAGVDKRIDVLATAIRAKMSVHDLTE CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCE LELAYAPPYGSAKDPINMAGFLASNLLDGTVKFWYAEEYPAITEHALIVDVRNPDEYAAW EEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEE HIPEAINLPLAELRTAIPSLKAQAEGRPIRLHCMVGMRSYIAYRILRQSGFTNVATLAGG ECCHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHCCC ALTLKAFGH EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA