| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yxiO [H]
Identifier: 159898849
GI number: 159898849
Start: 2970696
End: 2972093
Strand: Direct
Name: yxiO [H]
Synonym: Haur_2328
Alternate gene names: 159898849
Gene position: 2970696-2972093 (Clockwise)
Preceding gene: 159898847
Following gene: 159898850
Centisome position: 46.81
GC content: 50.86
Gene sequence:
>1398_bases GTGGCCAATTCAGTTCCGAGCACAGATTCAGCTCATCCAGTCAATGATCGACGGGAGATCGCAGGTTGGCGGCTTTACGA CTGGGCAAACTCAGGGTTTACCACCACCGTGATTGCCGCTTTATTTGGGCCATTTTTAGAGGCCTTGGCCAAAGAAGCGG TTGGCGATGGTGGCACAGTGCTAAGTTTAGGCATCTACAAGGTTACTGCCGAATCGCTCTACCCCGATGCAGTTTCGTTA TCGGTGTTATTGCAATTTCTCTTTTTGCCTTTGCTAGGAGCGTTGGCCGACTATACCAATATCAAGAAGCAATTGTTGAT GTTCTTTTGTTTGCTGGGTGCTGCCGCCACGACCATGCTCTATATCGCCACGCCGGCAACCTATCTGTTTGCGGCGCTAG CGTTTGTGGTTGCTAACCTCAGTTTTGGCGCTTCAATCGTTTTCTACAATGCCTTCCTCAACGAAATTACCACCGAGGAC ATGCGCGATAAGGTTTCGAGCCAAGGTTTTGCGTTTGGCTATATTGGCGGTGGGGTTTTGCTCGCAGTTAATTTGGTGCT GGTGGTGTTTGCCGAAACGTTTGGCCTGACAACCTCCATGGCTGTGCGCATCTCCTTAGCTTCGGCAGGGCTGTGGTGGG GAATTTTCGGCTATTTCGGCATTCAACGGCTCAAAAATCGCGCTTCAGCTCGCAAGGTTCCGGCGGGCCAACATTATCTC ACGGTCAGTGTGCGCGAACTCCGGAGTGCCTTTCGCGACCTTGGGCGTTTGCGCCAAACCTTGCGCTTTTTGATTGGCTA TCTGCTCTACAACGATGGCATCCAAACTGTGATTGGCATTTCGTCAGTCTTTTTGGTCAACGAGCTATTTATAGCCAAAG GCCAAAGCTCAGACGACGCTCAATCGTTTTTGCTCGGTTTGGTGTTGATGATTCAATTTGTGGCTTTTGGCGGAGCCTTG GGCTTCGAACGAATTTCACGTAAAGTTGGCACCAAACGGGCGATTTTGATCTCGCTGTTTATCTGGACAGGTGTGATCGT CTATGCCTATGCCTTCTTAGATAGCGTGTTCCAGGCATGGTTTATGGGTGCGGCAATCGCTTTGGTGCTCGGCGGTTCAC AATCGCTTTCCCGCGCTTTGTTCTCACGTATGATCCCGCATGGTCGCGAAGCTGCCTTCTATGGCATTTACGAAATTTCC GAGCGTGGCACATCGTGGATTGGGCCGTTTATTTTTGCGCGGGTAATTGCCGCCACTGGCTCGTATCGCCAAGCAATTCT TTCGTTGATTGCGCTGTTTGCAGGTGGGATTGTGATTCTATTGCTCACCAACACCACCAAAGCCATTCACGATGCTGGCA ATCAATTGCCAGAAGAAGCCGCCGCCAGCCATAGCTAA
Upstream 100 bases:
>100_bases TACCCTTGGGTGTATCCGAAAAATCCTACAATCGGCTATACTTAGGCGCACACCCACGGAACACCCATTCTTCCTCTTGC ATGGCACAAGGAGACCACCA
Downstream 100 bases:
>100_bases ATTGGTCAATTAATCAAGTTTGCCAAGCATCAGCAATTGGTGCTTGGCTTTTTTGTGGATAGGAGTATTGTTTGACTGCC CGTGTGATTATTGCTGCCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MANSVPSTDSAHPVNDRREIAGWRLYDWANSGFTTTVIAALFGPFLEALAKEAVGDGGTVLSLGIYKVTAESLYPDAVSL SVLLQFLFLPLLGALADYTNIKKQLLMFFCLLGAAATTMLYIATPATYLFAALAFVVANLSFGASIVFYNAFLNEITTED MRDKVSSQGFAFGYIGGGVLLAVNLVLVVFAETFGLTTSMAVRISLASAGLWWGIFGYFGIQRLKNRASARKVPAGQHYL TVSVRELRSAFRDLGRLRQTLRFLIGYLLYNDGIQTVIGISSVFLVNELFIAKGQSSDDAQSFLLGLVLMIQFVAFGGAL GFERISRKVGTKRAILISLFIWTGVIVYAYAFLDSVFQAWFMGAAIALVLGGSQSLSRALFSRMIPHGREAAFYGIYEIS ERGTSWIGPFIFARVIAATGSYRQAILSLIALFAGGIVILLLTNTTKAIHDAGNQLPEEAAASHS
Sequences:
>Translated_465_residues MANSVPSTDSAHPVNDRREIAGWRLYDWANSGFTTTVIAALFGPFLEALAKEAVGDGGTVLSLGIYKVTAESLYPDAVSL SVLLQFLFLPLLGALADYTNIKKQLLMFFCLLGAAATTMLYIATPATYLFAALAFVVANLSFGASIVFYNAFLNEITTED MRDKVSSQGFAFGYIGGGVLLAVNLVLVVFAETFGLTTSMAVRISLASAGLWWGIFGYFGIQRLKNRASARKVPAGQHYL TVSVRELRSAFRDLGRLRQTLRFLIGYLLYNDGIQTVIGISSVFLVNELFIAKGQSSDDAQSFLLGLVLMIQFVAFGGAL GFERISRKVGTKRAILISLFIWTGVIVYAYAFLDSVFQAWFMGAAIALVLGGSQSLSRALFSRMIPHGREAAFYGIYEIS ERGTSWIGPFIFARVIAATGSYRQAILSLIALFAGGIVILLLTNTTKAIHDAGNQLPEEAAASHS >Mature_464_residues ANSVPSTDSAHPVNDRREIAGWRLYDWANSGFTTTVIAALFGPFLEALAKEAVGDGGTVLSLGIYKVTAESLYPDAVSLS VLLQFLFLPLLGALADYTNIKKQLLMFFCLLGAAATTMLYIATPATYLFAALAFVVANLSFGASIVFYNAFLNEITTEDM RDKVSSQGFAFGYIGGGVLLAVNLVLVVFAETFGLTTSMAVRISLASAGLWWGIFGYFGIQRLKNRASARKVPAGQHYLT VSVRELRSAFRDLGRLRQTLRFLIGYLLYNDGIQTVIGISSVFLVNELFIAKGQSSDDAQSFLLGLVLMIQFVAFGGALG FERISRKVGTKRAILISLFIWTGVIVYAYAFLDSVFQAWFMGAAIALVLGGSQSLSRALFSRMIPHGREAAFYGIYEISE RGTSWIGPFIFARVIAATGSYRQAILSLIALFAGGIVILLLTNTTKAIHDAGNQLPEEAAASHS
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319811, Length=479, Percent_Identity=22.3382045929019, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50316; Mature: 50185
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSVPSTDSAHPVNDRREIAGWRLYDWANSGFTTTVIAALFGPFLEALAKEAVGDGGTV CCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE LSLGIYKVTAESLYPDAVSLSVLLQFLFLPLLGALADYTNIKKQLLMFFCLLGAAATTML EEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIATPATYLFAALAFVVANLSFGASIVFYNAFLNEITTEDMRDKVSSQGFAFGYIGGGVL HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH LAVNLVLVVFAETFGLTTSMAVRISLASAGLWWGIFGYFGIQRLKNRASARKVPAGQHYL HHHHHHHHHHHHHHCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE TVSVRELRSAFRDLGRLRQTLRFLIGYLLYNDGIQTVIGISSVFLVNELFIAKGQSSDDA EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH QSFLLGLVLMIQFVAFGGALGFERISRKVGTKRAILISLFIWTGVIVYAYAFLDSVFQAW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMGAAIALVLGGSQSLSRALFSRMIPHGREAAFYGIYEISERGTSWIGPFIFARVIAATG HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEEEHHHHHHCCCCHHHHHHHHHHHHHCC SYRQAILSLIALFAGGIVILLLTNTTKAIHDAGNQLPEEAAASHS HHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure ANSVPSTDSAHPVNDRREIAGWRLYDWANSGFTTTVIAALFGPFLEALAKEAVGDGGTV CCCCCCCCCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE LSLGIYKVTAESLYPDAVSLSVLLQFLFLPLLGALADYTNIKKQLLMFFCLLGAAATTML EEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIATPATYLFAALAFVVANLSFGASIVFYNAFLNEITTEDMRDKVSSQGFAFGYIGGGVL HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH LAVNLVLVVFAETFGLTTSMAVRISLASAGLWWGIFGYFGIQRLKNRASARKVPAGQHYL HHHHHHHHHHHHHHCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE TVSVRELRSAFRDLGRLRQTLRFLIGYLLYNDGIQTVIGISSVFLVNELFIAKGQSSDDA EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH QSFLLGLVLMIQFVAFGGALGFERISRKVGTKRAILISLFIWTGVIVYAYAFLDSVFQAW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMGAAIALVLGGSQSLSRALFSRMIPHGREAAFYGIYEISERGTSWIGPFIFARVIAATG HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEEEHHHHHHCCCCHHHHHHHHHHHHHCC SYRQAILSLIALFAGGIVILLLTNTTKAIHDAGNQLPEEAAASHS HHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]