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The map label for this gene is ruvB [H]

Identifier: 159898816

GI number: 159898816

Start: 2935449

End: 2936513

Strand: Reverse

Name: ruvB [H]

Synonym: Haur_2295

Alternate gene names: 159898816

Gene position: 2936513-2935449 (Counterclockwise)

Preceding gene: 159898818

Following gene: 159898809

Centisome position: 46.27

GC content: 52.58

Gene sequence:

>1065_bases
ATGTCGGATGCGTTTGATCAAGCTCAACGAATGATTTCACCCAAGCCTCGCGAAGAGGATCAAGTGGTGGAGAAAAGTTT
GCGGCCAAAAAAGTTGGCCGAATATATTGGTCAAGAAAAAGTGTTGGCCAACCTCAAAATTGCGATTGCTGCGGCCAAAC
AACGCAAAGAGCCGCTTGATCATACCCTGTTTTATGGCCCGCCTGGCTTGGGTAAAACCACGCTCTCAACCATTTTGGCC
AACGAAATGGGCGTGAATATCAAAATTACCTCTGGCCCTGCGATCGAACGCGCTGGCGATTTGGCGGCAATTTTAACCAA
CCTCAAAAAAGATGATCTGCTCTTTATTGATGAAGTTCATCGCCTGAATCGCGCCGTCGAGGAAGTGATGTATCCAGCGA
TGGAAGATTTTGCGCTGGATATTATTGTGGGCAAAGGCCCAAGTGCTCGCAATTTGCGCCTGAAGTTACCGCGTTTTACC
GTGGTTGGGGCGACAACCCGTCTCGCTTTGCTCACCTCGCCCTTGCGCGATCGCTTTGGCTCGGTGCATCGGCTGGAATT
CTACTCGCTCGAAGCCATGACTGATATTGTGCGACGTTCGGCAGCCTTGCTCAAATCGCCAATGGATGATGCTGGGGCGT
TGGAGATTGCGCGGCGGGCGCGTGGCACACCACGGGTCGTCAATCGTCTGTTGCGGCGGGTGCGTGATTTTGCCTTGGTC
ATGGCCGATAATCACATTACACTCGAAGTTGCTCAAGCAGCGCTGGCTAGCCTTGAAATCGATGATCTAGGGCTTGATGA
GAACGATCGGCGGGTGTTGCGCACCTTGATCGAAACGTTTAATGGTGGGCCAGTTGGCTTAACCACCCTCGCGGCGGCAA
CCGCTGAAGAAGTTGATGCGATTGAAGATGTGTACGAGCCATATCTCTTACAGCTTGGCTTTATTCAGCGCACTCCACGC
GGACGGATTGCCACACGCCGCGCCTACGATCATCTGGGCTTGAGCTTTCCCGAAGCGTCGCGCCCAGCCGATACTCAACA
AGCTAGCTTTAATTTAGAGCAGTAG

Upstream 100 bases:

>100_bases
GAGTAAATTGGGCATGGCGCATTATAACAGGCTTTTTTGCTGATGATTCAAGCCTGCCTGCATGCGACCGTCTGTGCTAT
AATCGCTGTAGGAGGATGCC

Downstream 100 bases:

>100_bases
ATAGTTGACATAAAAACAGGCTGTTGATTGATACCAACAGCCTGTTTTGCTGGATTATTTAGCGATTGCCAGATCGTAGC
GTCGCCCAACTTCGCCCCAA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSDAFDQAQRMISPKPREEDQVVEKSLRPKKLAEYIGQEKVLANLKIAIAAAKQRKEPLDHTLFYGPPGLGKTTLSTILA
NEMGVNIKITSGPAIERAGDLAAILTNLKKDDLLFIDEVHRLNRAVEEVMYPAMEDFALDIIVGKGPSARNLRLKLPRFT
VVGATTRLALLTSPLRDRFGSVHRLEFYSLEAMTDIVRRSAALLKSPMDDAGALEIARRARGTPRVVNRLLRRVRDFALV
MADNHITLEVAQAALASLEIDDLGLDENDRRVLRTLIETFNGGPVGLTTLAAATAEEVDAIEDVYEPYLLQLGFIQRTPR
GRIATRRAYDHLGLSFPEASRPADTQQASFNLEQ

Sequences:

>Translated_354_residues
MSDAFDQAQRMISPKPREEDQVVEKSLRPKKLAEYIGQEKVLANLKIAIAAAKQRKEPLDHTLFYGPPGLGKTTLSTILA
NEMGVNIKITSGPAIERAGDLAAILTNLKKDDLLFIDEVHRLNRAVEEVMYPAMEDFALDIIVGKGPSARNLRLKLPRFT
VVGATTRLALLTSPLRDRFGSVHRLEFYSLEAMTDIVRRSAALLKSPMDDAGALEIARRARGTPRVVNRLLRRVRDFALV
MADNHITLEVAQAALASLEIDDLGLDENDRRVLRTLIETFNGGPVGLTTLAAATAEEVDAIEDVYEPYLLQLGFIQRTPR
GRIATRRAYDHLGLSFPEASRPADTQQASFNLEQ
>Mature_353_residues
SDAFDQAQRMISPKPREEDQVVEKSLRPKKLAEYIGQEKVLANLKIAIAAAKQRKEPLDHTLFYGPPGLGKTTLSTILAN
EMGVNIKITSGPAIERAGDLAAILTNLKKDDLLFIDEVHRLNRAVEEVMYPAMEDFALDIIVGKGPSARNLRLKLPRFTV
VGATTRLALLTSPLRDRFGSVHRLEFYSLEAMTDIVRRSAALLKSPMDDAGALEIARRARGTPRVVNRLLRRVRDFALVM
ADNHITLEVAQAALASLEIDDLGLDENDRRVLRTLIETFNGGPVGLTTLAAATAEEVDAIEDVYEPYLLQLGFIQRTPRG
RIATRRAYDHLGLSFPEASRPADTQQASFNLEQ

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=332, Percent_Identity=58.1325301204819, Blast_Score=393, Evalue=1e-110,
Organism=Escherichia coli, GI1787119, Length=134, Percent_Identity=35.0746268656716, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 39248; Mature: 39116

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAFDQAQRMISPKPREEDQVVEKSLRPKKLAEYIGQEKVLANLKIAIAAAKQRKEPLD
CCCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCC
HTLFYGPPGLGKTTLSTILANEMGVNIKITSGPAIERAGDLAAILTNLKKDDLLFIDEVH
CEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
RLNRAVEEVMYPAMEDFALDIIVGKGPSARNLRLKLPRFTVVGATTRLALLTSPLRDRFG
HHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHHCC
SVHRLEFYSLEAMTDIVRRSAALLKSPMDDAGALEIARRARGTPRVVNRLLRRVRDFALV
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEE
MADNHITLEVAQAALASLEIDDLGLDENDRRVLRTLIETFNGGPVGLTTLAAATAEEVDA
EECCCEEHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IEDVYEPYLLQLGFIQRTPRGRIATRRAYDHLGLSFPEASRPADTQQASFNLEQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
SDAFDQAQRMISPKPREEDQVVEKSLRPKKLAEYIGQEKVLANLKIAIAAAKQRKEPLD
CCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCC
HTLFYGPPGLGKTTLSTILANEMGVNIKITSGPAIERAGDLAAILTNLKKDDLLFIDEVH
CEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
RLNRAVEEVMYPAMEDFALDIIVGKGPSARNLRLKLPRFTVVGATTRLALLTSPLRDRFG
HHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHHCC
SVHRLEFYSLEAMTDIVRRSAALLKSPMDDAGALEIARRARGTPRVVNRLLRRVRDFALV
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEE
MADNHITLEVAQAALASLEIDDLGLDENDRRVLRTLIETFNGGPVGLTTLAAATAEEVDA
EECCCEEHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IEDVYEPYLLQLGFIQRTPRGRIATRRAYDHLGLSFPEASRPADTQQASFNLEQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA