| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898801
Identifier: 159898801
GI number: 159898801
Start: 2920833
End: 2921729
Strand: Reverse
Name: 159898801
Synonym: Haur_2280
Alternate gene names: NA
Gene position: 2921729-2920833 (Counterclockwise)
Preceding gene: 159898802
Following gene: 159898800
Centisome position: 46.04
GC content: 49.28
Gene sequence:
>897_bases ATGCAGAGTATCGACAAACTATTTGTAAACCGCGAAAAACAAACTGCTGGCTTTGTGAAGATGGTGCAAGGCGAAACGCC CAAACGCATCATGATGATTGAGGCTGGCGGTGGGTTGGGTAAATCGTGGACTGTCGAATTTATGCGAGCTGAATGTCAGC GGCGGGGCATTCCGAATACTGAAATTGATTTTGCCGATAGTGTTGTTTATGATTATTTGGCGATGTTGCGCCGTGCCCGC GATGGTTTGGGGCCAGCGGCGTTTAATCAATTTACCCAAGCACTCAACGAAGTAACTCAGCCAACCGTGCGGATCGAAAC GGGCACGGCCAACACCAATGCCATCAACAATCTCTTGGGCCAGGGCAATACGTTCTCAGGCTCGAATGTGAATGTTGGCG AGGTAGTTGCTGGCAATGTGATCAAAGATAATTCGTTTGTGATTAATGCTGATAATGCGGTTGTGCGCCAGGCCTTGCAA GATCGCTTGACCTTGGCGTTTTTTGAATGTTTAACCGCTTTGGCGGCCCAAGGCCCACTCTGTTTTTTCTTTGATACCTA TGATAAAGTCACGGTCGAAGCTGAAGCTTGGCTCATGGGCCATCTTTTGCCGCGGGTGCGCGATGGCTTGATTCAAAATG TGGTAGTGGTGATTGCTGGGCGTTCGGTGCCCAAACTCGATAATCAGTGGGATCGGATGATTGCGCGAACTGGGCTGGAT CTCTTTTCTGAACCGTATGTTAAGGAATATTTGGTTCAGCGGCGCGGCCTTATCGATGATCCAAATGTAATTAAAGCGCT CTTTCAAGGTAGCACCGGACAACCCCAACTGCTCGCGATGTTGGCTGATAATATCCTACGCTCACAAGATAGTGGAGGCG ATGATGACTGGCTCTGA
Upstream 100 bases:
>100_bases GCTGGCGAACTACACGCTGAGCGCAATGTAATCTAGGGGTGTTTCAAGCCTGCGTCGGTTGAGGCAGGCGCAGGCTTGAA TGGAGTGTTGAGCAACGCCT
Downstream 100 bases:
>100_bases AACGCATCAATGTCCTACATGCGAAACTGTCTTGCGCCCTACTACCCTATTTTGTCCGCGCTGTGGCACGCCGATTATGC CAACCGTCAGCAATGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MQSIDKLFVNREKQTAGFVKMVQGETPKRIMMIEAGGGLGKSWTVEFMRAECQRRGIPNTEIDFADSVVYDYLAMLRRAR DGLGPAAFNQFTQALNEVTQPTVRIETGTANTNAINNLLGQGNTFSGSNVNVGEVVAGNVIKDNSFVINADNAVVRQALQ DRLTLAFFECLTALAAQGPLCFFFDTYDKVTVEAEAWLMGHLLPRVRDGLIQNVVVVIAGRSVPKLDNQWDRMIARTGLD LFSEPYVKEYLVQRRGLIDDPNVIKALFQGSTGQPQLLAMLADNILRSQDSGGDDDWL
Sequences:
>Translated_298_residues MQSIDKLFVNREKQTAGFVKMVQGETPKRIMMIEAGGGLGKSWTVEFMRAECQRRGIPNTEIDFADSVVYDYLAMLRRAR DGLGPAAFNQFTQALNEVTQPTVRIETGTANTNAINNLLGQGNTFSGSNVNVGEVVAGNVIKDNSFVINADNAVVRQALQ DRLTLAFFECLTALAAQGPLCFFFDTYDKVTVEAEAWLMGHLLPRVRDGLIQNVVVVIAGRSVPKLDNQWDRMIARTGLD LFSEPYVKEYLVQRRGLIDDPNVIKALFQGSTGQPQLLAMLADNILRSQDSGGDDDWL >Mature_298_residues MQSIDKLFVNREKQTAGFVKMVQGETPKRIMMIEAGGGLGKSWTVEFMRAECQRRGIPNTEIDFADSVVYDYLAMLRRAR DGLGPAAFNQFTQALNEVTQPTVRIETGTANTNAINNLLGQGNTFSGSNVNVGEVVAGNVIKDNSFVINADNAVVRQALQ DRLTLAFFECLTALAAQGPLCFFFDTYDKVTVEAEAWLMGHLLPRVRDGLIQNVVVVIAGRSVPKLDNQWDRMIARTGLD LFSEPYVKEYLVQRRGLIDDPNVIKALFQGSTGQPQLLAMLADNILRSQDSGGDDDWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32940; Mature: 32940
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIDKLFVNREKQTAGFVKMVQGETPKRIMMIEAGGGLGKSWTVEFMRAECQRRGIPNT CCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC EIDFADSVVYDYLAMLRRARDGLGPAAFNQFTQALNEVTQPTVRIETGTANTNAINNLLG CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHC QGNTFSGSNVNVGEVVAGNVIKDNSFVINADNAVVRQALQDRLTLAFFECLTALAAQGPL CCCCCCCCCCCHHHHHCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE CFFFDTYDKVTVEAEAWLMGHLLPRVRDGLIQNVVVVIAGRSVPKLDNQWDRMIARTGLD EEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCHH LFSEPYVKEYLVQRRGLIDDPNVIKALFQGSTGQPQLLAMLADNILRSQDSGGDDDWL HHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQSIDKLFVNREKQTAGFVKMVQGETPKRIMMIEAGGGLGKSWTVEFMRAECQRRGIPNT CCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC EIDFADSVVYDYLAMLRRARDGLGPAAFNQFTQALNEVTQPTVRIETGTANTNAINNLLG CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHC QGNTFSGSNVNVGEVVAGNVIKDNSFVINADNAVVRQALQDRLTLAFFECLTALAAQGPL CCCCCCCCCCCHHHHHCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE CFFFDTYDKVTVEAEAWLMGHLLPRVRDGLIQNVVVVIAGRSVPKLDNQWDRMIARTGLD EEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCHH LFSEPYVKEYLVQRRGLIDDPNVIKALFQGSTGQPQLLAMLADNILRSQDSGGDDDWL HHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA