| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898751
Identifier: 159898751
GI number: 159898751
Start: 2836438
End: 2837199
Strand: Direct
Name: 159898751
Synonym: Haur_2230
Alternate gene names: NA
Gene position: 2836438-2837199 (Clockwise)
Preceding gene: 159898750
Following gene: 159898752
Centisome position: 44.69
GC content: 48.43
Gene sequence:
>762_bases ATGGCGCAGATTTATCGCTGTCGGCTGGTGTTACTAGAACCTACCTTCTTCAGCACCCGCGAAATTAGCAATTTGTATCA AACTGAAGCCTTTATTGGCCATATTGCCCTCGCTTATGCCTTAGGTTTAGCGCCCAGTCGCTATGCCAACGATGGCAAAA CAATCTACTATCAACAGGATTTGGCAGCGTTAAATCAGGCAGGTGTCTACTTGACACCTGCCACGATTACGAGCCAAGCC CGTTTTAGCCTTGGCCAATTCAATGCTCAAGCCGAAAGCTATTGGTTTGCAATGGGTAATAACGCAATTATTACCGCACC AGAAGGCACTTGGGCCGAACGGAATGGCAGCTCATGGTATATCAACGATGGGGTCAGCACCCCAAAAAAAGTACGGGTTG AAAATCGCCCACAATTTGGCCGAATTCGCGCCCTAGCCATTGGCACAACCGCCGAATTTTATGCGATTAGCCAGCATGAA TTAAGCTTGCCCAGCTATTTGCGGCTTGGCAAATGGATGAGCAAAGCATCGCTAGCAAGCCAAGCAGTCGCGATTAGCGG CGAAAGTGATGGTGGAGTAATTCCATTTCTGCTGGCTGGAGCCGATCTTAGCCCAGATTGTAGATTGTTGGCGTTTGATG TGTTACATGTGCCGCCAACGCCCTTAATTCGCCATAGCCATGTGCAAGGGCCATGCTATCAACTCGACGAGAAAATCTTG CTCCCCAAAGATATGGCCTTTAATCTGGAGGCATTTAAATGA
Upstream 100 bases:
>100_bases ATGAACTGGGACAACTCTATGCCAACCCCGAACAACTCAAGGCAATGCTCAGCCGCTTGGCCACCAGTTATCCGATGACC CAGAAAAAAGGAAAATAACT
Downstream 100 bases:
>100_bases TCACAATTCAATTAACCGGCCATAAGGAAAAACTCGCGCCGCCGAATACCATCCCAAACTATCGCGCAGCAGCACCATTG CTCTATCATCAAGTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAQIYRCRLVLLEPTFFSTREISNLYQTEAFIGHIALAYALGLAPSRYANDGKTIYYQQDLAALNQAGVYLTPATITSQA RFSLGQFNAQAESYWFAMGNNAIITAPEGTWAERNGSSWYINDGVSTPKKVRVENRPQFGRIRALAIGTTAEFYAISQHE LSLPSYLRLGKWMSKASLASQAVAISGESDGGVIPFLLAGADLSPDCRLLAFDVLHVPPTPLIRHSHVQGPCYQLDEKIL LPKDMAFNLEAFK
Sequences:
>Translated_253_residues MAQIYRCRLVLLEPTFFSTREISNLYQTEAFIGHIALAYALGLAPSRYANDGKTIYYQQDLAALNQAGVYLTPATITSQA RFSLGQFNAQAESYWFAMGNNAIITAPEGTWAERNGSSWYINDGVSTPKKVRVENRPQFGRIRALAIGTTAEFYAISQHE LSLPSYLRLGKWMSKASLASQAVAISGESDGGVIPFLLAGADLSPDCRLLAFDVLHVPPTPLIRHSHVQGPCYQLDEKIL LPKDMAFNLEAFK >Mature_252_residues AQIYRCRLVLLEPTFFSTREISNLYQTEAFIGHIALAYALGLAPSRYANDGKTIYYQQDLAALNQAGVYLTPATITSQAR FSLGQFNAQAESYWFAMGNNAIITAPEGTWAERNGSSWYINDGVSTPKKVRVENRPQFGRIRALAIGTTAEFYAISQHEL SLPSYLRLGKWMSKASLASQAVAISGESDGGVIPFLLAGADLSPDCRLLAFDVLHVPPTPLIRHSHVQGPCYQLDEKILL PKDMAFNLEAFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27927; Mature: 27796
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIYRCRLVLLEPTFFSTREISNLYQTEAFIGHIALAYALGLAPSRYANDGKTIYYQQD CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH LAALNQAGVYLTPATITSQARFSLGQFNAQAESYWFAMGNNAIITAPEGTWAERNGSSWY HHHHHCCCEEEECCEECCCHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEE INDGVSTPKKVRVENRPQFGRIRALAIGTTAEFYAISQHELSLPSYLRLGKWMSKASLAS EECCCCCCCEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH QAVAISGESDGGVIPFLLAGADLSPDCRLLAFDVLHVPPTPLIRHSHVQGPCYQLDEKIL EEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCEECCCCCCCHHHCCCEEE LPKDMAFNLEAFK CCCCCCCCEEECC >Mature Secondary Structure AQIYRCRLVLLEPTFFSTREISNLYQTEAFIGHIALAYALGLAPSRYANDGKTIYYQQD CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH LAALNQAGVYLTPATITSQARFSLGQFNAQAESYWFAMGNNAIITAPEGTWAERNGSSWY HHHHHCCCEEEECCEECCCHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEE INDGVSTPKKVRVENRPQFGRIRALAIGTTAEFYAISQHELSLPSYLRLGKWMSKASLAS EECCCCCCCEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH QAVAISGESDGGVIPFLLAGADLSPDCRLLAFDVLHVPPTPLIRHSHVQGPCYQLDEKIL EEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCEECCCCCCCHHHCCCEEE LPKDMAFNLEAFK CCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA