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The map label for this gene is arnC [H]

Identifier: 159898705

GI number: 159898705

Start: 2769753

End: 2770574

Strand: Direct

Name: arnC [H]

Synonym: Haur_2184

Alternate gene names: 159898705

Gene position: 2769753-2770574 (Clockwise)

Preceding gene: 159898701

Following gene: 159898706

Centisome position: 43.64

GC content: 44.89

Gene sequence:

>822_bases
ATGGGAGACATTCGCTACCACCAATGGAAACATGAGCCTTTAACCGAAATGCCACATATTTCGGTAGTGGTTCCCTGTTT
CAACGAACAGGAACGTATTCTACCAACCATTGGCGCAATTATGGCATGTTTTTGTACGCTCGGACGGCCATGGGAATTAA
TCATTAGCGATGATGGATCAACCGATCAAACCGTTGCCATAATCGAAGAACTTGGGTTTGCCAATATTAACTTGTTGAAA
GCGCCTTGTAACCAAGGCAAAGGCAGTGCCGTTCGGGCAGGGATAATAGCTGCACGTGGTGATTTTATTCTCTTTGCAGA
TGCTGATAATTCAACCCCAATTGAGCAAATTCATCAGTTGTTACCATTGCTTGAAACAGGTGCCTATGATCTCGCGATTG
GCTCTCGCGCAACTATTGCAGCTCACACCCAACATCGCAGTCTCGTTCGCCGCACGATGAGCGCAACCTTACGTGCAATT
GTTCACTATGGGTTACAGTTGGACATCTACGATAGTCAATGTGGCTTCAAAGTCTTTCATCAGAGTGTTGCAAAACACTT
AGTTCAGCTTCAAACCATGCCAGGCTTTGCTTTTGATCTTGAATTGTTGTTTCTCGCCAAAAAATATCACTACCAAATCA
TTGAAATTTCTGTCGAATGGATCGATGCGCCCGGCTCAAAAGTCCATCCTATTCGCGATACATACCGCTTTATTCGTGAC
ATTCTGAAAATTCAAATTAATAACCTGCGAGGTCGCTATGCCAAACCGTGGCTTAAGGCTCGTCATCGTGACAACCTTCC
CTCCAAGCACTGGTACGCTTAA

Upstream 100 bases:

>100_bases
AAAGTGCTATGGCTAGGGTGTACCGTTAGACCATACGCAAGTACCTCTTCCCCGATTATGCTACAGCTATCTACTATTTT
CATATCAAGGAATAGTCCCA

Downstream 100 bases:

>100_bases
TGAGTATGCCTGGCATTTCGTGCGGGCTTTTCAACAAAAGCGCGAAATTCGTGAGATTATTGTCTTAGCCGATGAGCTTG
CCAGGCCAGAACCAGAGCTA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MGDIRYHQWKHEPLTEMPHISVVVPCFNEQERILPTIGAIMACFCTLGRPWELIISDDGSTDQTVAIIEELGFANINLLK
APCNQGKGSAVRAGIIAARGDFILFADADNSTPIEQIHQLLPLLETGAYDLAIGSRATIAAHTQHRSLVRRTMSATLRAI
VHYGLQLDIYDSQCGFKVFHQSVAKHLVQLQTMPGFAFDLELLFLAKKYHYQIIEISVEWIDAPGSKVHPIRDTYRFIRD
ILKIQINNLRGRYAKPWLKARHRDNLPSKHWYA

Sequences:

>Translated_273_residues
MGDIRYHQWKHEPLTEMPHISVVVPCFNEQERILPTIGAIMACFCTLGRPWELIISDDGSTDQTVAIIEELGFANINLLK
APCNQGKGSAVRAGIIAARGDFILFADADNSTPIEQIHQLLPLLETGAYDLAIGSRATIAAHTQHRSLVRRTMSATLRAI
VHYGLQLDIYDSQCGFKVFHQSVAKHLVQLQTMPGFAFDLELLFLAKKYHYQIIEISVEWIDAPGSKVHPIRDTYRFIRD
ILKIQINNLRGRYAKPWLKARHRDNLPSKHWYA
>Mature_272_residues
GDIRYHQWKHEPLTEMPHISVVVPCFNEQERILPTIGAIMACFCTLGRPWELIISDDGSTDQTVAIIEELGFANINLLKA
PCNQGKGSAVRAGIIAARGDFILFADADNSTPIEQIHQLLPLLETGAYDLAIGSRATIAAHTQHRSLVRRTMSATLRAIV
HYGLQLDIYDSQCGFKVFHQSVAKHLVQLQTMPGFAFDLELLFLAKKYHYQIIEISVEWIDAPGSKVHPIRDTYRFIRDI
LKIQINNLRGRYAKPWLKARHRDNLPSKHWYA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI7019323, Length=261, Percent_Identity=30.6513409961686, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI215276969, Length=255, Percent_Identity=29.4117647058824, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI4503363, Length=206, Percent_Identity=26.2135922330097, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1788588, Length=202, Percent_Identity=26.2376237623762, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25146207, Length=245, Percent_Identity=33.469387755102, Blast_Score=127, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI71999402, Length=213, Percent_Identity=27.2300469483568, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325029, Length=255, Percent_Identity=34.1176470588235, Blast_Score=126, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24582769, Length=257, Percent_Identity=31.9066147859922, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24585265, Length=206, Percent_Identity=26.6990291262136, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 30979; Mature: 30848

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIRYHQWKHEPLTEMPHISVVVPCFNEQERILPTIGAIMACFCTLGRPWELIISDDGS
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
TDQTVAIIEELGFANINLLKAPCNQGKGSAVRAGIIAARGDFILFADADNSTPIEQIHQL
CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHHHH
LPLLETGAYDLAIGSRATIAAHTQHRSLVRRTMSATLRAIVHYGLQLDIYDSQCGFKVFH
HHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH
QSVAKHLVQLQTMPGFAFDLELLFLAKKYHYQIIEISVEWIDAPGSKVHPIRDTYRFIRD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCHHHHHHHHHH
ILKIQINNLRGRYAKPWLKARHRDNLPSKHWYA
HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GDIRYHQWKHEPLTEMPHISVVVPCFNEQERILPTIGAIMACFCTLGRPWELIISDDGS
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
TDQTVAIIEELGFANINLLKAPCNQGKGSAVRAGIIAARGDFILFADADNSTPIEQIHQL
CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHHHH
LPLLETGAYDLAIGSRATIAAHTQHRSLVRRTMSATLRAIVHYGLQLDIYDSQCGFKVFH
HHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH
QSVAKHLVQLQTMPGFAFDLELLFLAKKYHYQIIEISVEWIDAPGSKVHPIRDTYRFIRD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCHHHHHHHHHH
ILKIQINNLRGRYAKPWLKARHRDNLPSKHWYA
HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA