| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898688
Identifier: 159898688
GI number: 159898688
Start: 2735121
End: 2736305
Strand: Reverse
Name: 159898688
Synonym: Haur_2167
Alternate gene names: NA
Gene position: 2736305-2735121 (Counterclockwise)
Preceding gene: 159898689
Following gene: 159898687
Centisome position: 43.11
GC content: 51.05
Gene sequence:
>1185_bases ATGACAATCATCCCTGTGCTCGCGCATTGGAATTCCGATGCCTTGCTTGCGATGCCCTTTGATCAATATCAGCGTTATCG GGTTAGTGCTGAGGCAATTTGCTTACTCAAAGAGGCAGCAGGAGCCAGCGATCAGCCTTGGCGCATTCTTGATGTTGGCG GCTTTTTCCCCCCACGCAATGGCGTGATGCCGCTCCAAGCTTTTTTTTCAAATGATCAAACTTTAGTCGTTGATACGGCT GAGTATGTAGGTGCTGGCTATCAGCAGGCTGATGGCACGCAGTTACCTTTTGATGATCAGGCGTTTGATATTGTCTTAAG TTGTGATACGCTCGAACACATTCCGCTGGAAGGTCGGGATAGTTTTTTGGCCGAATTACGGCGCGTAGCTCGGCGGGCGG TCTTTTTAGCAGCACCCCACGCGCTTACCAATGTCGCTACATCTGAGGCGATGTTGCGCCAGTATCTGACCCAATTACAA ATGAATAACCCCATGCTCGATGAGCATGTTCACTATGGTTTGCCCCAATCGAGTTTGGTTGAGGCCTGGCTCGCCAGCGA AAAGCTCGATTATCTGGCGTTTGAGAGCGGTTACTTGCCGCATTGGCAATTGTTGATGGTGCTGAAACATTTGTTATTTC GCCAACCACAACGCGATGCGATGCACGCCAATTTCGATGCGCTCTATAATCAGCGTTTTTATGAATACGATCAACGTGGG CCTGGCTATCGCCGAATCTATCTGATTGCCACTACGGGCCAGCTTGCTCCCAGCCTCCAGGCCTTGGTCGAACGTTCATT ACGCCCAACTCCAACTAATCCGGCGAGTGATTTGTTGAGCATTGTCTTACCTGTGCTCACCAGCACAGCCTACGATACAG TGTTGTTTCAACACAACCTAACCACACGTTTGGATGGCTTCGAACAACAGCAACAGACCCAAACCCAGCTGCTTCAGCAA ACCCTAGAGCGACATGCGACAACCATTGAGGTGGTGCGTGATCTCGAGCGGCGCTTGCTCGATGCCTCAGTGCTGGCAGC CCAACTTGAGGCTGAAAAGCGTGGCGTGCAAGCCCAACTCGATTATGTGCATTGGCAGCATTCACTCCTTCAGCAAGCGC TTAATCGTTCACTAGCCCAGCGCATCGCGACTGGTTTACGCCAACTTTTGAGGAGATTTCGCTAA
Upstream 100 bases:
>100_bases AATTGCTAGCTAGCTAGATTTATATAGTCATTACGGCTAGGCCCATCCAAAGAGTATGCTATAATTCGCATTTTGTAGGT GTACTTTGGAAAGGGTGGCA
Downstream 100 bases:
>100_bases TGAGTAAACGTCAGTTAAATGTCGTTTTCTGGAGTGGTTGTGGTGGCGAGACCCAGCGTTATCGCTGTCAGCATGCAATT GAGCAATTACAGTATCGTGG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTIIPVLAHWNSDALLAMPFDQYQRYRVSAEAICLLKEAAGASDQPWRILDVGGFFPPRNGVMPLQAFFSNDQTLVVDTA EYVGAGYQQADGTQLPFDDQAFDIVLSCDTLEHIPLEGRDSFLAELRRVARRAVFLAAPHALTNVATSEAMLRQYLTQLQ MNNPMLDEHVHYGLPQSSLVEAWLASEKLDYLAFESGYLPHWQLLMVLKHLLFRQPQRDAMHANFDALYNQRFYEYDQRG PGYRRIYLIATTGQLAPSLQALVERSLRPTPTNPASDLLSIVLPVLTSTAYDTVLFQHNLTTRLDGFEQQQQTQTQLLQQ TLERHATTIEVVRDLERRLLDASVLAAQLEAEKRGVQAQLDYVHWQHSLLQQALNRSLAQRIATGLRQLLRRFR
Sequences:
>Translated_394_residues MTIIPVLAHWNSDALLAMPFDQYQRYRVSAEAICLLKEAAGASDQPWRILDVGGFFPPRNGVMPLQAFFSNDQTLVVDTA EYVGAGYQQADGTQLPFDDQAFDIVLSCDTLEHIPLEGRDSFLAELRRVARRAVFLAAPHALTNVATSEAMLRQYLTQLQ MNNPMLDEHVHYGLPQSSLVEAWLASEKLDYLAFESGYLPHWQLLMVLKHLLFRQPQRDAMHANFDALYNQRFYEYDQRG PGYRRIYLIATTGQLAPSLQALVERSLRPTPTNPASDLLSIVLPVLTSTAYDTVLFQHNLTTRLDGFEQQQQTQTQLLQQ TLERHATTIEVVRDLERRLLDASVLAAQLEAEKRGVQAQLDYVHWQHSLLQQALNRSLAQRIATGLRQLLRRFR >Mature_393_residues TIIPVLAHWNSDALLAMPFDQYQRYRVSAEAICLLKEAAGASDQPWRILDVGGFFPPRNGVMPLQAFFSNDQTLVVDTAE YVGAGYQQADGTQLPFDDQAFDIVLSCDTLEHIPLEGRDSFLAELRRVARRAVFLAAPHALTNVATSEAMLRQYLTQLQM NNPMLDEHVHYGLPQSSLVEAWLASEKLDYLAFESGYLPHWQLLMVLKHLLFRQPQRDAMHANFDALYNQRFYEYDQRGP GYRRIYLIATTGQLAPSLQALVERSLRPTPTNPASDLLSIVLPVLTSTAYDTVLFQHNLTTRLDGFEQQQQTQTQLLQQT LERHATTIEVVRDLERRLLDASVLAAQLEAEKRGVQAQLDYVHWQHSLLQQALNRSLAQRIATGLRQLLRRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44915; Mature: 44784
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIPVLAHWNSDALLAMPFDQYQRYRVSAEAICLLKEAAGASDQPWRILDVGGFFPPRN CCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC GVMPLQAFFSNDQTLVVDTAEYVGAGYQQADGTQLPFDDQAFDIVLSCDTLEHIPLEGRD CCCHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCH SFLAELRRVARRAVFLAAPHALTNVATSEAMLRQYLTQLQMNNPMLDEHVHYGLPQSSLV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHH EAWLASEKLDYLAFESGYLPHWQLLMVLKHLLFRQPQRDAMHANFDALYNQRFYEYDQRG HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCC PGYRRIYLIATTGQLAPSLQALVERSLRPTPTNPASDLLSIVLPVLTSTAYDTVLFQHNL CCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCC TTRLDGFEQQQQTQTQLLQQTLERHATTIEVVRDLERRLLDASVLAAQLEAEKRGVQAQL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DYVHWQHSLLQQALNRSLAQRIATGLRQLLRRFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIIPVLAHWNSDALLAMPFDQYQRYRVSAEAICLLKEAAGASDQPWRILDVGGFFPPRN CEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC GVMPLQAFFSNDQTLVVDTAEYVGAGYQQADGTQLPFDDQAFDIVLSCDTLEHIPLEGRD CCCHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCH SFLAELRRVARRAVFLAAPHALTNVATSEAMLRQYLTQLQMNNPMLDEHVHYGLPQSSLV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHH EAWLASEKLDYLAFESGYLPHWQLLMVLKHLLFRQPQRDAMHANFDALYNQRFYEYDQRG HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCC PGYRRIYLIATTGQLAPSLQALVERSLRPTPTNPASDLLSIVLPVLTSTAYDTVLFQHNL CCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCC TTRLDGFEQQQQTQTQLLQQTLERHATTIEVVRDLERRLLDASVLAAQLEAEKRGVQAQL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DYVHWQHSLLQQALNRSLAQRIATGLRQLLRRFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA