| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is dcuR [C]
Identifier: 159898669
GI number: 159898669
Start: 2705436
End: 2705861
Strand: Direct
Name: dcuR [C]
Synonym: Haur_2148
Alternate gene names: 159898669
Gene position: 2705436-2705861 (Clockwise)
Preceding gene: 159898668
Following gene: 159898670
Centisome position: 42.63
GC content: 45.07
Gene sequence:
>426_bases ATGTCGCTGATTCAAAAAATGACCAAAGCGTTTGTGCTGATCGTCGAAGATAATATTGATAACATGCTGGTATTAACTGA ATTGCTGAATGTTATGCCAGAAGTGCGTTATTGTAATGTACGGCCTTCAGGTCGCCAACTGTTTGCCTTCCTCGAAAACG ATGCTGTGCCCGCAATTAATTTAATTTTGTTGGATATTAACTTGCCACGCGAAAATGGCTATGTGCTATTACCTAAAATT CGTGTGCACCCCAAACTCTGCAATGCCTTGGTGATCGCGGTCAGCGCTCAGACAGGGCCGCAAGAAGTTGCCAAAATTCG TGCGGCAGGCTTCGATGGCTTTCTGGCCAAACCACTGCACTTCCAACGCTTCCCTGAACAATTACGCCGAATTATGAATG GTGAACAAATTTGGGAAGGTGCGTAA
Upstream 100 bases:
>100_bases GTTGTGCTCATTTCAACCGTTCCATGCCCCAGATCAGCGACAACGATTTACATACTTCAAACGATCAAACGAATTAATTA CTCACGAAGGAGTTAATAGT
Downstream 100 bases:
>100_bases TCTGGCTATTTAGCTAGGCCATTGTTAAGTATTCTAGCCAATAAATTATAGAAATCAAATCCACACTATTTTTGTGATCT ATTTAGATAATTTTAGGGTT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Two-Component Sensor Histidine Kinase/Response Regulator
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLIQKMTKAFVLIVEDNIDNMLVLTELLNVMPEVRYCNVRPSGRQLFAFLENDAVPAINLILLDINLPRENGYVLLPKI RVHPKLCNALVIAVSAQTGPQEVAKIRAAGFDGFLAKPLHFQRFPEQLRRIMNGEQIWEGA
Sequences:
>Translated_141_residues MSLIQKMTKAFVLIVEDNIDNMLVLTELLNVMPEVRYCNVRPSGRQLFAFLENDAVPAINLILLDINLPRENGYVLLPKI RVHPKLCNALVIAVSAQTGPQEVAKIRAAGFDGFLAKPLHFQRFPEQLRRIMNGEQIWEGA >Mature_140_residues SLIQKMTKAFVLIVEDNIDNMLVLTELLNVMPEVRYCNVRPSGRQLFAFLENDAVPAINLILLDINLPRENGYVLLPKIR VHPKLCNALVIAVSAQTGPQEVAKIRAAGFDGFLAKPLHFQRFPEQLRRIMNGEQIWEGA
Specific function: Member Of The Two-Component Regulatory System Dcur/Dcus. Involved In The C4-Dicarboxylate-Stimulated Regulation Of The Genes Encoding The Anaerobic Fumarate Respiratory System (Frdabcd; Nuoan; Dcub; Dcuc; Sdhcdab; Etc.). Weakly Regulates The Aerobic C4-Di
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15923; Mature: 15792
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIQKMTKAFVLIVEDNIDNMLVLTELLNVMPEVRYCNVRPSGRQLFAFLENDAVPAIN CHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHEEEEECCCCCCEEE LILLDINLPRENGYVLLPKIRVHPKLCNALVIAVSAQTGPQEVAKIRAAGFDGFLAKPLH EEEEEEECCCCCCEEEEEEEECCHHHHCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHH FQRFPEQLRRIMNGEQIWEGA HHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure SLIQKMTKAFVLIVEDNIDNMLVLTELLNVMPEVRYCNVRPSGRQLFAFLENDAVPAIN HHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHEEEEECCCCCCEEE LILLDINLPRENGYVLLPKIRVHPKLCNALVIAVSAQTGPQEVAKIRAAGFDGFLAKPLH EEEEEEECCCCCCEEEEEEEECCHHHHCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHH FQRFPEQLRRIMNGEQIWEGA HHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA