| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is xeg74 [H]
Identifier: 159898659
GI number: 159898659
Start: 2690675
End: 2693503
Strand: Reverse
Name: xeg74 [H]
Synonym: Haur_2138
Alternate gene names: 159898659
Gene position: 2693503-2690675 (Counterclockwise)
Preceding gene: 159898660
Following gene: 159898657
Centisome position: 42.44
GC content: 53.16
Gene sequence:
>2829_bases ATGCGAATGCTAAAGATGGCCGCAGCAGTAGTGGTGCTGTTTGCAGGCGTAATTCAAGCGATGGTGGCCGTGCCGCAATC GCGGGCGGCAAGTACTCAGCCATACAATTGGTCGAATGTCGAGATTGTTGGCGGTGGTTTTGTCCCAGGCATTATTTACA ATCCAACTGAACGCGATTTGGTGTATGCCCGCACCGATATTGGTGGCGCATACCGCTGGAACCCCACAACCAAGCGCTGG ATTCCCCTAACCGACTGGATTGGCGCAACCGATTGGAACTGGACAGGGATCGATAGCCTCGCGACCGACCCAGTTGATCC TAACCGCCTCTATTTGGCCGCTGGCACTTATACCAACGATTGGACTTCGGCCAACGGCGCGATTTTGCGCTCGACCAACA AAGGCAATTCGTGGGCACGCACCGACCTACCCTTTAAACTTGGCGGTAATATGCCAGGCCGCTCGATGGGCGAACGTTTG GCGATTGACCCCAACAAAAATAGCGTGCTTTACCTTGGTACACGCGGCCAAGGCCTCTGGCGCAGCACTGATTATGGCGC AACCTGGGCGCAAGTTACCAGTTTTCCGGCGATTGGCAACTATACCGATCCCTACTTCAATGACCGAATTGGGGTAGTAT GGGTAACGTTTGATCCACGGACTGGCACTAGTGGCAGCGCTTCGCAAACGATTTATGTTGGGGTTGCTGATACGACCACC AGTATTTATCGCAGCACTGATGGTGGGGCAACTTGGGCAGCATTACCCGGCCAACCAACTGCTGGCTATTTACCCCATCA TGCTACCCTCGCCTCAAATGGCATGCTCTACATTACCTACAGCGATACACCTGGCCCCTACGATGGTGGCAAGGGTGATG TTTGGAAATATAACACCGCCACCCAAGCTTGGACGAACATTAGCCCAATTCCTTCGAGCAGCGCCGACGATTATTTTGGC TATGGCGGCTTGGCTGTCGATGCGCAAAATCCCAATACGTTGTTGGTAACTAGCCTCAATTCATGGTGGCCTGATGCCTT GATTTATCGCAGCACCGATGGCGGCGCAACATGGAGCGGTATTTGGGAATGGGCCAACTATCCCGAACGCACCTTCCGCT ATACCCAAGATATTAGTACATCGCCATGGCTCGACTTTGGTGGTAATGCAACCGCACCTGAAGTTGCACCCAAATTAGGC TGGATGATCGGCGACATCGAGATTGATCCATTCAACTCAGATCGCATGCTCTATGGCACTGGCGCAACGATTTATGGCAC CGATAATTTGACCGCTTGGGATACTGGCGGCAAAGTTGCGCTTGATGTGCGTGCCCATGGCCTTGAAGAAACCGCAGTTC TCGAATTGGTCAGCCCACCAGAAGGCGTGCACTTGGTGAGTGCCTTGGGTGATATTGCTGGCTTCTATCATACCGATCTG ACTAAGGCTCCACCATGGTCGGCTAGCCTCAAATTTGGCTCATCGACCAGTATCGATTTTGCTGGAACCCGCCCGAATGT GATGGCTCGCACAGGCTATGTTGGCGAAGGCAGCACGGTCAAACGGGTGGCGTGTTCATGGGATGGCGGCCAAAATTGGT CGCACGCCAGCAGTGAACCAACTGGCTCGGTTGGTGGCGGAAAAATCGCCATGGCTTCCGATGCTTCGATGATTGTTTGG AGCGGTACGACTGCTCCAGTCAGTTACTCGATGGGCTGTGGTAATAGTTGGTCGGCGAGTGCTGGTATTCCGGCTGGGGC AGTCGTGATTGCTGATCGGGTGAAATCGACGACTTTCTATGGCATCGCCAATGGTACGCTCTATCGCAGCACCGATGCAG CCCGCAACTTTACCGCTGTTGCAACGGGCTTGCCCACCAAGAGCGCCAAAATCGAGGCTGTTTTGGGCATCGAAGGCGAT TTGTGGTTGGCTGGCGGCCAAGATGGCTTGTTCCATTCAACCGATGGTGGCACAACATTCAGCAAAATTGCTGGAGTGCA GGTTGCCAATGTGGTTGGTTTTGGTAAGGCAGCACCCAGCCAAAGCTATCAAGCAATCTACATTACTGGAGCAATTGATG GCGTAGAAGGCTTCTTCCGCTCAGATGATGGCGGCACAACATGGGTGCGCATCAACGACGATCAACATCAATATGGCTCG ACCAACGAAACTATTACTGGCGACCCACGGATTTATGGGCGGGTTTATATTGGTACGAATGGCCGTGGGATTATTTATGG TGATATTGCTGGCTCAACTCCGACCAATACACCAGCCCCAGCCACGGCGACCGCAACTCGCATACCAACCGCAACTTCAA CCAGCGTACCACCGACGGCAACGAGTGTTCCGCCAACCGCGACCTCGACTCGCGTGCCAACGGCGACTCCGCTGACTTCA ACTGCGATTCCCTATACGCCAACGCCAACCTCAACCCGTGTACCAACCGCAACCCCAATTACGCCAACCAGTTTGCCATA CACGCCAACGTCAACTCCAGCGCCTGGTGGCTGCCGGATTAACTATGTGGTTAATCAGTGGAATACCGCATTTACTGGCG GTGTGACAATTACTAATTTGGGAGCGCCGATTAGTGGTGGTTGGACGTTGACTTGGAATTTTGCCAATGGTCAAACGGTG ACGAGCAGTTGGAATACTGTGCTGACCCAAACTGGTTCAGCTGTGACTGCCAAGCATAGCGCCGATTGGAATGCCAATAT TCCAACCAATGGCACACAAAGCTTTGGCTTTATTGCTAGTCATAATGGCACAAATGCCGTGCCAACCAACTTTGTTTTGA ATGGCGTTGCTTGTAGCGTTGCGCCATAG
Upstream 100 bases:
>100_bases AAGGGCTAAGCCCATCTTGTTTGTCGTTGTTGCCAGTGCTTGCCTGCTGCTTTAAATCAAACATCGTAACCAAAAATAGG GTGCAAAGGAGACCCCATCT
Downstream 100 bases:
>100_bases CCAAATCGCCAAGCGAGCCTGTTTCTAGGCGGCAGGCTCGCTTATGTTGGATTCAAGGCCACACGTAAGTTTGCTTCTAG GCGGCAAACTTACGTGTGGC
Product: cellulose-binding family II protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 942; Mature: 942
Protein sequence:
>942_residues MRMLKMAAAVVVLFAGVIQAMVAVPQSRAASTQPYNWSNVEIVGGGFVPGIIYNPTERDLVYARTDIGGAYRWNPTTKRW IPLTDWIGATDWNWTGIDSLATDPVDPNRLYLAAGTYTNDWTSANGAILRSTNKGNSWARTDLPFKLGGNMPGRSMGERL AIDPNKNSVLYLGTRGQGLWRSTDYGATWAQVTSFPAIGNYTDPYFNDRIGVVWVTFDPRTGTSGSASQTIYVGVADTTT SIYRSTDGGATWAALPGQPTAGYLPHHATLASNGMLYITYSDTPGPYDGGKGDVWKYNTATQAWTNISPIPSSSADDYFG YGGLAVDAQNPNTLLVTSLNSWWPDALIYRSTDGGATWSGIWEWANYPERTFRYTQDISTSPWLDFGGNATAPEVAPKLG WMIGDIEIDPFNSDRMLYGTGATIYGTDNLTAWDTGGKVALDVRAHGLEETAVLELVSPPEGVHLVSALGDIAGFYHTDL TKAPPWSASLKFGSSTSIDFAGTRPNVMARTGYVGEGSTVKRVACSWDGGQNWSHASSEPTGSVGGGKIAMASDASMIVW SGTTAPVSYSMGCGNSWSASAGIPAGAVVIADRVKSTTFYGIANGTLYRSTDAARNFTAVATGLPTKSAKIEAVLGIEGD LWLAGGQDGLFHSTDGGTTFSKIAGVQVANVVGFGKAAPSQSYQAIYITGAIDGVEGFFRSDDGGTTWVRINDDQHQYGS TNETITGDPRIYGRVYIGTNGRGIIYGDIAGSTPTNTPAPATATATRIPTATSTSVPPTATSVPPTATSTRVPTATPLTS TAIPYTPTPTSTRVPTATPITPTSLPYTPTSTPAPGGCRINYVVNQWNTAFTGGVTITNLGAPISGGWTLTWNFANGQTV TSSWNTVLTQTGSAVTAKHSADWNANIPTNGTQSFGFIASHNGTNAVPTNFVLNGVACSVAP
Sequences:
>Translated_942_residues MRMLKMAAAVVVLFAGVIQAMVAVPQSRAASTQPYNWSNVEIVGGGFVPGIIYNPTERDLVYARTDIGGAYRWNPTTKRW IPLTDWIGATDWNWTGIDSLATDPVDPNRLYLAAGTYTNDWTSANGAILRSTNKGNSWARTDLPFKLGGNMPGRSMGERL AIDPNKNSVLYLGTRGQGLWRSTDYGATWAQVTSFPAIGNYTDPYFNDRIGVVWVTFDPRTGTSGSASQTIYVGVADTTT SIYRSTDGGATWAALPGQPTAGYLPHHATLASNGMLYITYSDTPGPYDGGKGDVWKYNTATQAWTNISPIPSSSADDYFG YGGLAVDAQNPNTLLVTSLNSWWPDALIYRSTDGGATWSGIWEWANYPERTFRYTQDISTSPWLDFGGNATAPEVAPKLG WMIGDIEIDPFNSDRMLYGTGATIYGTDNLTAWDTGGKVALDVRAHGLEETAVLELVSPPEGVHLVSALGDIAGFYHTDL TKAPPWSASLKFGSSTSIDFAGTRPNVMARTGYVGEGSTVKRVACSWDGGQNWSHASSEPTGSVGGGKIAMASDASMIVW SGTTAPVSYSMGCGNSWSASAGIPAGAVVIADRVKSTTFYGIANGTLYRSTDAARNFTAVATGLPTKSAKIEAVLGIEGD LWLAGGQDGLFHSTDGGTTFSKIAGVQVANVVGFGKAAPSQSYQAIYITGAIDGVEGFFRSDDGGTTWVRINDDQHQYGS TNETITGDPRIYGRVYIGTNGRGIIYGDIAGSTPTNTPAPATATATRIPTATSTSVPPTATSVPPTATSTRVPTATPLTS TAIPYTPTPTSTRVPTATPITPTSLPYTPTSTPAPGGCRINYVVNQWNTAFTGGVTITNLGAPISGGWTLTWNFANGQTV TSSWNTVLTQTGSAVTAKHSADWNANIPTNGTQSFGFIASHNGTNAVPTNFVLNGVACSVAP >Mature_942_residues MRMLKMAAAVVVLFAGVIQAMVAVPQSRAASTQPYNWSNVEIVGGGFVPGIIYNPTERDLVYARTDIGGAYRWNPTTKRW IPLTDWIGATDWNWTGIDSLATDPVDPNRLYLAAGTYTNDWTSANGAILRSTNKGNSWARTDLPFKLGGNMPGRSMGERL AIDPNKNSVLYLGTRGQGLWRSTDYGATWAQVTSFPAIGNYTDPYFNDRIGVVWVTFDPRTGTSGSASQTIYVGVADTTT SIYRSTDGGATWAALPGQPTAGYLPHHATLASNGMLYITYSDTPGPYDGGKGDVWKYNTATQAWTNISPIPSSSADDYFG YGGLAVDAQNPNTLLVTSLNSWWPDALIYRSTDGGATWSGIWEWANYPERTFRYTQDISTSPWLDFGGNATAPEVAPKLG WMIGDIEIDPFNSDRMLYGTGATIYGTDNLTAWDTGGKVALDVRAHGLEETAVLELVSPPEGVHLVSALGDIAGFYHTDL TKAPPWSASLKFGSSTSIDFAGTRPNVMARTGYVGEGSTVKRVACSWDGGQNWSHASSEPTGSVGGGKIAMASDASMIVW SGTTAPVSYSMGCGNSWSASAGIPAGAVVIADRVKSTTFYGIANGTLYRSTDAARNFTAVATGLPTKSAKIEAVLGIEGD LWLAGGQDGLFHSTDGGTTFSKIAGVQVANVVGFGKAAPSQSYQAIYITGAIDGVEGFFRSDDGGTTWVRINDDQHQYGS TNETITGDPRIYGRVYIGTNGRGIIYGDIAGSTPTNTPAPATATATRIPTATSTSVPPTATSVPPTATSTRVPTATPLTS TAIPYTPTPTSTRVPTATPITPTSLPYTPTSTPAPGGCRINYVVNQWNTAFTGGVTITNLGAPISGGWTLTWNFANGQTV TSSWNTVLTQTGSAVTAKHSADWNANIPTNGTQSFGFIASHNGTNAVPTNFVLNGVACSVAP
Specific function: Hydrolyzes the glucosidic bonds of unbranched Glc residues in tamarind seed xyloglucan, producing XXXG, XLXG, XXLG and XLLG. May have a dual endo- and exo- mode of action towards xyloglucan, or may have an endo-processive mode of action [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM3 (carbohydrate binding type-3) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002860 - InterPro: IPR008965 - InterPro: IPR001956 - InterPro: IPR005102 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF02012 BNR; PF00942 CBM_3; PF03442 DUF291 [H]
EC number: NA
Molecular weight: Translated: 99326; Mature: 99326
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLKMAAAVVVLFAGVIQAMVAVPQSRAASTQPYNWSNVEIVGGGFVPGIIYNPTERDL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCE VYARTDIGGAYRWNPTTKRWIPLTDWIGATDWNWTGIDSLATDPVDPNRLYLAAGTYTND EEEEECCCCEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC WTSANGAILRSTNKGNSWARTDLPFKLGGNMPGRSMGERLAIDPNKNSVLYLGTRGQGLW CCCCCCEEEEECCCCCCEEECCCCEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCE RSTDYGATWAQVTSFPAIGNYTDPYFNDRIGVVWVTFDPRTGTSGSASQTIYVGVADTTT ECCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCE SIYRSTDGGATWAALPGQPTAGYLPHHATLASNGMLYITYSDTPGPYDGGKGDVWKYNTA EEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEECCC TQAWTNISPIPSSSADDYFGYGGLAVDAQNPNTLLVTSLNSWWPDALIYRSTDGGATWSG HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEHH IWEWANYPERTFRYTQDISTSPWLDFGGNATAPEVAPKLGWMIGDIEIDPFNSDRMLYGT HHHHCCCCHHHEEEECCCCCCCCEECCCCCCCCHHHHHHCEEEEEEEECCCCCCEEEEEC GATIYGTDNLTAWDTGGKVALDVRAHGLEETAVLELVSPPEGVHLVSALGDIAGFYHTDL CEEEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC TKAPPWSASLKFGSSTSIDFAGTRPNVMARTGYVGEGSTVKRVACSWDGGQNWSHASSEP CCCCCCCCEEECCCCCCEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC TGSVGGGKIAMASDASMIVWSGTTAPVSYSMGCGNSWSASAGIPAGAVVIADRVKSTTFY CCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEE GIANGTLYRSTDAARNFTAVATGLPTKSAKIEAVLGIEGDLWLAGGQDGLFHSTDGGTTF EEECCEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCEECCCCCCCH SKIAGVQVANVVGFGKAAPSQSYQAIYITGAIDGVEGFFRSDDGGTTWVRINDDQHQYGS HHHCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCHHEECCCCCEEEEEECCCCHHCCC TNETITGDPRIYGRVYIGTNGRGIIYGDIAGSTPTNTPAPATATATRIPTATSTSVPPTA CCCEEECCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC TSVPPTATSTRVPTATPLTSTAIPYTPTPTSTRVPTATPITPTSLPYTPTSTPAPGGCRI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE NYVVNQWNTAFTGGVTITNLGAPISGGWTLTWNFANGQTVTSSWNTVLTQTGSAVTAKHS EEEEECCCCEEECCEEEEECCCCCCCCEEEEEECCCCCEEECCCCEEEEECCCEEEEECC ADWNANIPTNGTQSFGFIASHNGTNAVPTNFVLNGVACSVAP CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECEEEECCC >Mature Secondary Structure MRMLKMAAAVVVLFAGVIQAMVAVPQSRAASTQPYNWSNVEIVGGGFVPGIIYNPTERDL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCE VYARTDIGGAYRWNPTTKRWIPLTDWIGATDWNWTGIDSLATDPVDPNRLYLAAGTYTND EEEEECCCCEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC WTSANGAILRSTNKGNSWARTDLPFKLGGNMPGRSMGERLAIDPNKNSVLYLGTRGQGLW CCCCCCEEEEECCCCCCEEECCCCEEECCCCCCCCCCCEEEECCCCCCEEEEEECCCCCE RSTDYGATWAQVTSFPAIGNYTDPYFNDRIGVVWVTFDPRTGTSGSASQTIYVGVADTTT ECCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCE SIYRSTDGGATWAALPGQPTAGYLPHHATLASNGMLYITYSDTPGPYDGGKGDVWKYNTA EEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEECCC TQAWTNISPIPSSSADDYFGYGGLAVDAQNPNTLLVTSLNSWWPDALIYRSTDGGATWSG HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEHH IWEWANYPERTFRYTQDISTSPWLDFGGNATAPEVAPKLGWMIGDIEIDPFNSDRMLYGT HHHHCCCCHHHEEEECCCCCCCCEECCCCCCCCHHHHHHCEEEEEEEECCCCCCEEEEEC GATIYGTDNLTAWDTGGKVALDVRAHGLEETAVLELVSPPEGVHLVSALGDIAGFYHTDL CEEEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC TKAPPWSASLKFGSSTSIDFAGTRPNVMARTGYVGEGSTVKRVACSWDGGQNWSHASSEP CCCCCCCCEEECCCCCCEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCC TGSVGGGKIAMASDASMIVWSGTTAPVSYSMGCGNSWSASAGIPAGAVVIADRVKSTTFY CCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEE GIANGTLYRSTDAARNFTAVATGLPTKSAKIEAVLGIEGDLWLAGGQDGLFHSTDGGTTF EEECCEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCEECCCCCCCH SKIAGVQVANVVGFGKAAPSQSYQAIYITGAIDGVEGFFRSDDGGTTWVRINDDQHQYGS HHHCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCHHEECCCCCEEEEEECCCCHHCCC TNETITGDPRIYGRVYIGTNGRGIIYGDIAGSTPTNTPAPATATATRIPTATSTSVPPTA CCCEEECCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC TSVPPTATSTRVPTATPLTSTAIPYTPTPTSTRVPTATPITPTSLPYTPTSTPAPGGCRI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE NYVVNQWNTAFTGGVTITNLGAPISGGWTLTWNFANGQTVTSSWNTVLTQTGSAVTAKHS EEEEECCCCEEECCEEEEECCCCCCCCEEEEEECCCCCEEECCCCEEEEECCCEEEEECC ADWNANIPTNGTQSFGFIASHNGTNAVPTNFVLNGVACSVAP CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA