| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898634
Identifier: 159898634
GI number: 159898634
Start: 2653451
End: 2654392
Strand: Direct
Name: 159898634
Synonym: Haur_2113
Alternate gene names: NA
Gene position: 2653451-2654392 (Clockwise)
Preceding gene: 159898633
Following gene: 159898635
Centisome position: 41.81
GC content: 50.11
Gene sequence:
>942_bases ATGCTGAAAGTGCTTCTCATCAGCAGCGATCTACCGGATCAAGCTCTGCTTGGCCAGTTGCTGGATGCTGGATATCGATT GAGTTTGTTGCGGCTTGAGCAACTAGCTAAGCAAACAACCATCGCCGATCAAAGCCTCTTGGTCGGCTGTTTTACCAATG AGGATGAATTAGCGCAACTCACCGAAAACTTGGGCAGTCAAGAGCCACTATGGTGGGGCTGGAATCAGAGTAACTATCCG CATTTAACCTTGAAGGCCTATGAAGCTGGCGCTCGTCATGTGATTACCAACGACGCAAACGCTAGCCAAATCATCCAAAA CTTAAATGCGCTGCACGTCAGCCAACTTCATCAGCAAACTACCCGCGGTCGAGAGCAGCAGTATCCACGTGGGGCAATGG TGCATTTACAAGCCGATCAAGCCTTATTGATTGAAACTGGAATTTTGAGCTTGCAAGTCAATCATCCTGATGGCTCGAAC GTGCTTCTAGGTTTGTTCGGGCCAAACCAATTAGTCTGTGGCCATCCACACGATGGCTGTGCGATCTATCTGCAAGCGCA TACCCCGATTAGCGCTCAGCTCTTGCCGTGGCAACGGGTCTTGAGTGAGCCTTCGTTGATCGAACGATTACGCATGCGGC TGCAACTAATGGAAGCGTGGGCTTCGTGCCAAGCCCATCCTTACCTTGATCAACGAGTTTTAGGCATTTTGAATTTGTTG GCCGAGCAATTTGGCAAACAGCATAACCAGGGCTTATTGATTGACGTGCGGATTACCCATGAACAACTAGCCTCAGCGGT TGGCTCAACCCGCGCAACGATCTCACGGATTATCCGCGATTTGCGCACACGAAGTATGCTTGATAGCCACTTCAGCGGCA GTAATGAGCGTTTTTGGCTCCCAATCGTGCCCCACTATCATCACACCCATCCCTTTGCTTAA
Upstream 100 bases:
>100_bases TATTTAGGCAACATTTAACTACTCATCACGAAAACTATTTTGACAAGTAGGCGATATTTGATATATTGTATCAATAATTA TGTGGTGAGTAATCAAAACT
Downstream 100 bases:
>100_bases TGTAGATTAGACTTAGGTTGGATACTATATTCAGCGCCGCTATGGGAAACAGCTCCCATGGAACGAAATTGTATTTTAGA ACACCTCGTTGCAGCCAGAA
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLKVLLISSDLPDQALLGQLLDAGYRLSLLRLEQLAKQTTIADQSLLVGCFTNEDELAQLTENLGSQEPLWWGWNQSNYP HLTLKAYEAGARHVITNDANASQIIQNLNALHVSQLHQQTTRGREQQYPRGAMVHLQADQALLIETGILSLQVNHPDGSN VLLGLFGPNQLVCGHPHDGCAIYLQAHTPISAQLLPWQRVLSEPSLIERLRMRLQLMEAWASCQAHPYLDQRVLGILNLL AEQFGKQHNQGLLIDVRITHEQLASAVGSTRATISRIIRDLRTRSMLDSHFSGSNERFWLPIVPHYHHTHPFA
Sequences:
>Translated_313_residues MLKVLLISSDLPDQALLGQLLDAGYRLSLLRLEQLAKQTTIADQSLLVGCFTNEDELAQLTENLGSQEPLWWGWNQSNYP HLTLKAYEAGARHVITNDANASQIIQNLNALHVSQLHQQTTRGREQQYPRGAMVHLQADQALLIETGILSLQVNHPDGSN VLLGLFGPNQLVCGHPHDGCAIYLQAHTPISAQLLPWQRVLSEPSLIERLRMRLQLMEAWASCQAHPYLDQRVLGILNLL AEQFGKQHNQGLLIDVRITHEQLASAVGSTRATISRIIRDLRTRSMLDSHFSGSNERFWLPIVPHYHHTHPFA >Mature_313_residues MLKVLLISSDLPDQALLGQLLDAGYRLSLLRLEQLAKQTTIADQSLLVGCFTNEDELAQLTENLGSQEPLWWGWNQSNYP HLTLKAYEAGARHVITNDANASQIIQNLNALHVSQLHQQTTRGREQQYPRGAMVHLQADQALLIETGILSLQVNHPDGSN VLLGLFGPNQLVCGHPHDGCAIYLQAHTPISAQLLPWQRVLSEPSLIERLRMRLQLMEAWASCQAHPYLDQRVLGILNLL AEQFGKQHNQGLLIDVRITHEQLASAVGSTRATISRIIRDLRTRSMLDSHFSGSNERFWLPIVPHYHHTHPFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35165; Mature: 35165
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVLLISSDLPDQALLGQLLDAGYRLSLLRLEQLAKQTTIADQSLLVGCFTNEDELAQL CEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH TENLGSQEPLWWGWNQSNYPHLTLKAYEAGARHVITNDANASQIIQNLNALHVSQLHQQT HHHCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH TRGREQQYPRGAMVHLQADQALLIETGILSLQVNHPDGSNVLLGLFGPNQLVCGHPHDGC HCCHHHCCCCCEEEEEECCCEEEEEECEEEEEEECCCCCCEEEEEECCCCEEECCCCCCE AIYLQAHTPISAQLLPWQRVLSEPSLIERLRMRLQLMEAWASCQAHPYLDQRVLGILNLL EEEEEECCCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AEQFGKQHNQGLLIDVRITHEQLASAVGSTRATISRIIRDLRTRSMLDSHFSGSNERFWL HHHHHHHCCCCEEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PIVPHYHHTHPFA EECCCCCCCCCCC >Mature Secondary Structure MLKVLLISSDLPDQALLGQLLDAGYRLSLLRLEQLAKQTTIADQSLLVGCFTNEDELAQL CEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH TENLGSQEPLWWGWNQSNYPHLTLKAYEAGARHVITNDANASQIIQNLNALHVSQLHQQT HHHCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH TRGREQQYPRGAMVHLQADQALLIETGILSLQVNHPDGSNVLLGLFGPNQLVCGHPHDGC HCCHHHCCCCCEEEEEECCCEEEEEECEEEEEEECCCCCCEEEEEECCCCEEECCCCCCE AIYLQAHTPISAQLLPWQRVLSEPSLIERLRMRLQLMEAWASCQAHPYLDQRVLGILNLL EEEEEECCCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AEQFGKQHNQGLLIDVRITHEQLASAVGSTRATISRIIRDLRTRSMLDSHFSGSNERFWL HHHHHHHCCCCEEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PIVPHYHHTHPFA EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA