Click here to switch to the map view.

The map label for this gene is znuC [H]

Identifier: 159898618

GI number: 159898618

Start: 2621578

End: 2622252

Strand: Reverse

Name: znuC [H]

Synonym: Haur_2097

Alternate gene names: 159898618

Gene position: 2622252-2621578 (Counterclockwise)

Preceding gene: 159898619

Following gene: 159898617

Centisome position: 41.32

GC content: 55.85

Gene sequence:

>675_bases
ATGACGATGCTATGGACTGAGGCAACGGCAATCAGTGCCCAACCAGCCCGCTTAATCATTGAACAACTTGTCTGTCGCTA
TGGGGCAACCTGCGTGGTTGATCATGTTGATCTCGCGCTGAACCCTGGTGATCATGTGGCGCTGATTGGCGGCAATGGTT
CTGGGAAATCAACCGTCCTTCGGGCAATTATGGGATTTCATCCGATTAGCAGCGGCACATTAGTACTAGACCAGCAAACC
ATTCACCCACGTACCAAACGAGCAAACCAGTATCGCCACATTGCTTGGATGCCACAGCGGCAAACGCTCGGGCATTTTCC
ACTACGGGTGCGCGAGTTACTCGAACGAAGCGGCAATGTACGCCTTGCCATCCAAGCAGCAGCGCACCTCGCTGTAGACC
AGCTCATGGATCGCCCCATGCAGACCCTTTCGGGTGGTCAGATCCAGCGGATCTTTTTAGCACGCGCCATTGGCAGCCTT
GGCGCAGGGGCAGGACTGTTATTAGCAGACGAACCCACGGCGGCACTCGATTTTGCAGGTCAAACCGTCGTTGCCGACGT
GTTGGCAAGCCTGCCAGTCACAATGTTGGTCGTTACCCATGATCGGGCAGTCGTGGCCCGTTGTCAGCGGGTGCTTGAAA
TGGCGGGCGGCAGTCTGCGGGAACTTGCTGTATGA

Upstream 100 bases:

>100_bases
ATCGCGCACGCTGTGCAACCACCCCAGCACGATGGTGACTATACAGTGCATACCAATTAAATCGACTCATCAGACTATAG
GTGCAGAAGGACGCAAACGC

Downstream 100 bases:

>100_bases
ACAGTGTGGAATTCATCGATTTGCTGCGATTGCTTCCGGTGCAACGCGCCATCATTGCCTTGATCGTCGCTGGTAGCGCC
TTTCCCATTATTGGGGTCTG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTMLWTEATAISAQPARLIIEQLVCRYGATCVVDHVDLALNPGDHVALIGGNGSGKSTVLRAIMGFHPISSGTLVLDQQT
IHPRTKRANQYRHIAWMPQRQTLGHFPLRVRELLERSGNVRLAIQAAAHLAVDQLMDRPMQTLSGGQIQRIFLARAIGSL
GAGAGLLLADEPTAALDFAGQTVVADVLASLPVTMLVVTHDRAVVARCQRVLEMAGGSLRELAV

Sequences:

>Translated_224_residues
MTMLWTEATAISAQPARLIIEQLVCRYGATCVVDHVDLALNPGDHVALIGGNGSGKSTVLRAIMGFHPISSGTLVLDQQT
IHPRTKRANQYRHIAWMPQRQTLGHFPLRVRELLERSGNVRLAIQAAAHLAVDQLMDRPMQTLSGGQIQRIFLARAIGSL
GAGAGLLLADEPTAALDFAGQTVVADVLASLPVTMLVVTHDRAVVARCQRVLEMAGGSLRELAV
>Mature_223_residues
TMLWTEATAISAQPARLIIEQLVCRYGATCVVDHVDLALNPGDHVALIGGNGSGKSTVLRAIMGFHPISSGTLVLDQQTI
HPRTKRANQYRHIAWMPQRQTLGHFPLRVRELLERSGNVRLAIQAAAHLAVDQLMDRPMQTLSGGQIQRIFLARAIGSLG
AGAGLLLADEPTAALDFAGQTVVADVLASLPVTMLVVTHDRAVVARCQRVLEMAGGSLRELAV

Specific function: Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system [H]

COG id: COG3842

COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955963, Length=224, Percent_Identity=31.6964285714286, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI9665248, Length=209, Percent_Identity=29.1866028708134, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=33.4975369458128, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788165, Length=201, Percent_Identity=33.8308457711443, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=32.0754716981132, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=31.4553990610329, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1789672, Length=233, Percent_Identity=30.0429184549356, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=30.2884615384615, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790739, Length=214, Percent_Identity=32.2429906542056, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786803, Length=206, Percent_Identity=32.0388349514563, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787712, Length=187, Percent_Identity=31.0160427807487, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786345, Length=202, Percent_Identity=32.1782178217822, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=32.6732673267327, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48995001, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=220, Percent_Identity=27.7272727272727, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=29.646017699115, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790467, Length=186, Percent_Identity=30.6451612903226, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=31.0185185185185, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082267, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787112, Length=202, Percent_Identity=29.2079207920792, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786872, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI145693107, Length=210, Percent_Identity=32.3809523809524, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786398, Length=205, Percent_Identity=28.2926829268293, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786253, Length=186, Percent_Identity=34.4086021505376, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787089, Length=216, Percent_Identity=32.8703703703704, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=209, Percent_Identity=30.622009569378, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=205, Percent_Identity=29.7560975609756, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=206, Percent_Identity=29.126213592233, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=206, Percent_Identity=28.6407766990291, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24659289, Length=208, Percent_Identity=29.3269230769231, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573573, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28573571, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017882
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 24062; Mature: 23931

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLWTEATAISAQPARLIIEQLVCRYGATCVVDHVDLALNPGDHVALIGGNGSGKSTVL
CCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECEEEEECCCCEEEEEECCCCCHHHHH
RAIMGFHPISSGTLVLDQQTIHPRTKRANQYRHIAWMPQRQTLGHFPLRVRELLERSGNV
HHHHHCCCCCCCEEEEECCCCCCHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHCCCE
RLAIQAAAHLAVDQLMDRPMQTLSGGQIQRIFLARAIGSLGAGAGLLLADEPTAALDFAG
EEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCC
QTVVADVLASLPVTMLVVTHDRAVVARCQRVLEMAGGSLRELAV
HHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure 
TMLWTEATAISAQPARLIIEQLVCRYGATCVVDHVDLALNPGDHVALIGGNGSGKSTVL
CEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECEEEEECCCCEEEEEECCCCCHHHHH
RAIMGFHPISSGTLVLDQQTIHPRTKRANQYRHIAWMPQRQTLGHFPLRVRELLERSGNV
HHHHHCCCCCCCEEEEECCCCCCHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHCCCE
RLAIQAAAHLAVDQLMDRPMQTLSGGQIQRIFLARAIGSLGAGAGLLLADEPTAALDFAG
EEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCC
QTVVADVLASLPVTMLVVTHDRAVVARCQRVLEMAGGSLRELAV
HHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA