Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898602

Identifier: 159898602

GI number: 159898602

Start: 2591588

End: 2592319

Strand: Direct

Name: 159898602

Synonym: Haur_2081

Alternate gene names: NA

Gene position: 2591588-2592319 (Clockwise)

Preceding gene: 159898599

Following gene: 159898603

Centisome position: 40.83

GC content: 56.01

Gene sequence:

>732_bases
ATGCGGACGTTTATGACGAATCTGGCGGACTTTTTGATCAGCAACGGCCTTCTTCCGCAGGCCCAAGGCTTGACGGATGC
TGAGATCACCATGGTCACCGCACACGTGCCCTGCCCGATCCCTGCTGCCTATCATGCCTTTCTTCACACCTTTGGGGGTT
CTGACACCAGCCGTTGGTGTGGTGGCGATGATCTCGGTATCGCTGGGGTGATGGCTGCGCACGATGTCCATCAGCATATG
ATTCACGATGGGCCAATGGATTGGCTCGGTGATCCCATGGTTATCCCCATCATGCAGTATGCTGGATATACCCTCTATTA
TCTCCGTGCCGATATGGGCGATGATCCACCAGTCCTGTCCGTCGTCCTTGGAGATGCACCACCGCCGATCGCGCCAACAA
CGGAGGACTCCGCTTTCTCACGCTGGGTACAAGATTATGCCTTGGCTTCGATCCCGAATCCGACAAGGCATAAGACCAGT
CGTGCTTTGCTGGAGCAGGCATGGGAGGTTGAAGCAATCTTAGCGCATACCGTCCAGTATCGTCGTTTTCGCGACGACGT
GTATCGGAACGCGACATCCCATGGAATCGTACCAACCCCACAGGCGTTTATGCATACATGGGCGGCGATTTTTTGTCAGA
CCGACCTGTATCATGCCATGCGTGCGCGGAATATGCCAATCCCCTTTGGATGGGCGTATCCCCCCGCCGAGGCGGCGGAT
ACCCACGAGTAG

Upstream 100 bases:

>100_bases
GCTCACGGTGTGGCGTAAACAGTGCTCCTTGTGACGGATAGCTGTACGGCTACGATATGCTATGCTTGGTGTGGCATCAA
GACGACGAGGAGGATCAGCC

Downstream 100 bases:

>100_bases
GCTCGCCTGGAGCCGTGAACACGCGCTTCGGTCGTCAGGCGAATCGCGATGAGGACGCAACCCACATTTTCGTATCGTGA
TAGCGCTCACCGAGTGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRTFMTNLADFLISNGLLPQAQGLTDAEITMVTAHVPCPIPAAYHAFLHTFGGSDTSRWCGGDDLGIAGVMAAHDVHQHM
IHDGPMDWLGDPMVIPIMQYAGYTLYYLRADMGDDPPVLSVVLGDAPPPIAPTTEDSAFSRWVQDYALASIPNPTRHKTS
RALLEQAWEVEAILAHTVQYRRFRDDVYRNATSHGIVPTPQAFMHTWAAIFCQTDLYHAMRARNMPIPFGWAYPPAEAAD
THE

Sequences:

>Translated_243_residues
MRTFMTNLADFLISNGLLPQAQGLTDAEITMVTAHVPCPIPAAYHAFLHTFGGSDTSRWCGGDDLGIAGVMAAHDVHQHM
IHDGPMDWLGDPMVIPIMQYAGYTLYYLRADMGDDPPVLSVVLGDAPPPIAPTTEDSAFSRWVQDYALASIPNPTRHKTS
RALLEQAWEVEAILAHTVQYRRFRDDVYRNATSHGIVPTPQAFMHTWAAIFCQTDLYHAMRARNMPIPFGWAYPPAEAAD
THE
>Mature_243_residues
MRTFMTNLADFLISNGLLPQAQGLTDAEITMVTAHVPCPIPAAYHAFLHTFGGSDTSRWCGGDDLGIAGVMAAHDVHQHM
IHDGPMDWLGDPMVIPIMQYAGYTLYYLRADMGDDPPVLSVVLGDAPPPIAPTTEDSAFSRWVQDYALASIPNPTRHKTS
RALLEQAWEVEAILAHTVQYRRFRDDVYRNATSHGIVPTPQAFMHTWAAIFCQTDLYHAMRARNMPIPFGWAYPPAEAAD
THE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26961; Mature: 26961

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFMTNLADFLISNGLLPQAQGLTDAEITMVTAHVPCPIPAAYHAFLHTFGGSDTSRWC
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
GGDDLGIAGVMAAHDVHQHMIHDGPMDWLGDPMVIPIMQYAGYTLYYLRADMGDDPPVLS
CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCEEEEEEECCCCCCCEEE
VVLGDAPPPIAPTTEDSAFSRWVQDYALASIPNPTRHKTSRALLEQAWEVEAILAHTVQY
EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFRDDVYRNATSHGIVPTPQAFMHTWAAIFCQTDLYHAMRARNMPIPFGWAYPPAEAAD
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
THE
CCC
>Mature Secondary Structure
MRTFMTNLADFLISNGLLPQAQGLTDAEITMVTAHVPCPIPAAYHAFLHTFGGSDTSRWC
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
GGDDLGIAGVMAAHDVHQHMIHDGPMDWLGDPMVIPIMQYAGYTLYYLRADMGDDPPVLS
CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCEEEEEEECCCCCCCEEE
VVLGDAPPPIAPTTEDSAFSRWVQDYALASIPNPTRHKTSRALLEQAWEVEAILAHTVQY
EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFRDDVYRNATSHGIVPTPQAFMHTWAAIFCQTDLYHAMRARNMPIPFGWAYPPAEAAD
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
THE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA