| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898566
Identifier: 159898566
GI number: 159898566
Start: 2548060
End: 2548992
Strand: Reverse
Name: 159898566
Synonym: Haur_2042
Alternate gene names: NA
Gene position: 2548992-2548060 (Counterclockwise)
Preceding gene: 159898570
Following gene: 159898565
Centisome position: 40.16
GC content: 37.51
Gene sequence:
>933_bases ATGGCTGAATTTATAACTGAATATATAAAGAAAATCCAAATAGGCGAAAGCCTCGTTGAATTCAATCAAAAAAATAATGC ACTAAAAGAGAATATCAATATTCTCAATGAAGAGTCAAAACTTGCAGATTCGATCCAAAAAATCGATGGATTCGATTCAT CAGGCGACGAACCATCCGATAAAATAACTCAACATGATAACAATACCAAAAATGAGATGGATTCTACTGCTCTACTATAT CCTGATGAGATAGACAACGAAACAAAGACTACAAGTTTGTATAAAAAGGTATTTGCTACAGCCATCACCAGTCCTAGTGC AGCATTAATGTTTTTATCATCAAGGATAGAATCAAAAATTCGTAAGGATATCGAACCATTTATCGATACAGAGCAATCAA AGAAACCACGGAGTATTCATGAAATGGTACACCTTGGTGTGAATGTCGGTATTTTCCCACCACGACTTGAAGAAACAATT CGTGATTTTTGGTACATTCGCACGAAAATTATTCATGGCGAATCAACGCAGTATAAGAGCGCCGATATCATGTCGTTAAT TCATTCAGGATTTGAAATTATGAATATTCTGTCTAAGTCACTGCATACAGAGACGTTCACAAGAACGTATCGCCATATCT TAGAGTATCTCGCAACAGAAGGCCCAATCAGCAAAAAAGATATTGCGAATCGTATAGGACAATCTGCCTATGCGAACCAG ATAAAACTTACGTATGAACCATGGAATTTGATTATCCATACGCACGAAAACCATATCGCTATTAATGATCGCGGAAAAGC ATTCCTTGCAGGGACATTGCCAATCCCAGAATCAATCATACGTTTGTATACAGGCGATTGGATTGCCGTCCCGAACACGC AATTAATCACAGTTGCCGATGTCGATAATGATTCTCAACTGGGTAATGGTTAG
Upstream 100 bases:
>100_bases TACTGGTATATTAATTTATCTATTGGTTCGAAATGACAATAATGCGATATGGGTTATGGTTCTCATCTCTGTATTAGTAG TAACCTATGATATGCGTACT
Downstream 100 bases:
>100_bases AACAAATCGGATCGTGTCTCAATATTTCATGTCTGCAAATTCTGCCTATCATCGAATTGACCGTGTTCCATCGCGATGAT GCAAAAAGCCTAGCACACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAEFITEYIKKIQIGESLVEFNQKNNALKENINILNEESKLADSIQKIDGFDSSGDEPSDKITQHDNNTKNEMDSTALLY PDEIDNETKTTSLYKKVFATAITSPSAALMFLSSRIESKIRKDIEPFIDTEQSKKPRSIHEMVHLGVNVGIFPPRLEETI RDFWYIRTKIIHGESTQYKSADIMSLIHSGFEIMNILSKSLHTETFTRTYRHILEYLATEGPISKKDIANRIGQSAYANQ IKLTYEPWNLIIHTHENHIAINDRGKAFLAGTLPIPESIIRLYTGDWIAVPNTQLITVADVDNDSQLGNG
Sequences:
>Translated_310_residues MAEFITEYIKKIQIGESLVEFNQKNNALKENINILNEESKLADSIQKIDGFDSSGDEPSDKITQHDNNTKNEMDSTALLY PDEIDNETKTTSLYKKVFATAITSPSAALMFLSSRIESKIRKDIEPFIDTEQSKKPRSIHEMVHLGVNVGIFPPRLEETI RDFWYIRTKIIHGESTQYKSADIMSLIHSGFEIMNILSKSLHTETFTRTYRHILEYLATEGPISKKDIANRIGQSAYANQ IKLTYEPWNLIIHTHENHIAINDRGKAFLAGTLPIPESIIRLYTGDWIAVPNTQLITVADVDNDSQLGNG >Mature_309_residues AEFITEYIKKIQIGESLVEFNQKNNALKENINILNEESKLADSIQKIDGFDSSGDEPSDKITQHDNNTKNEMDSTALLYP DEIDNETKTTSLYKKVFATAITSPSAALMFLSSRIESKIRKDIEPFIDTEQSKKPRSIHEMVHLGVNVGIFPPRLEETIR DFWYIRTKIIHGESTQYKSADIMSLIHSGFEIMNILSKSLHTETFTRTYRHILEYLATEGPISKKDIANRIGQSAYANQI KLTYEPWNLIIHTHENHIAINDRGKAFLAGTLPIPESIIRLYTGDWIAVPNTQLITVADVDNDSQLGNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35158; Mature: 35027
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFITEYIKKIQIGESLVEFNQKNNALKENINILNEESKLADSIQKIDGFDSSGDEPSD CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCH KITQHDNNTKNEMDSTALLYPDEIDNETKTTSLYKKVFATAITSPSAALMFLSSRIESKI HHHCCCCCCHHHHCCEEEECCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RKDIEPFIDTEQSKKPRSIHEMVHLGVNVGIFPPRLEETIRDFWYIRTKIIHGESTQYKS HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCH ADIMSLIHSGFEIMNILSKSLHTETFTRTYRHILEYLATEGPISKKDIANRIGQSAYANQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHCC IKLTYEPWNLIIHTHENHIAINDRGKAFLAGTLPIPESIIRLYTGDWIAVPNTQLITVAD EEEEEECEEEEEEECCCEEEECCCCCEEEEECCCCHHHHHHHHCCCEEECCCCEEEEEEE VDNDSQLGNG CCCCCCCCCC >Mature Secondary Structure AEFITEYIKKIQIGESLVEFNQKNNALKENINILNEESKLADSIQKIDGFDSSGDEPSD HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCH KITQHDNNTKNEMDSTALLYPDEIDNETKTTSLYKKVFATAITSPSAALMFLSSRIESKI HHHCCCCCCHHHHCCEEEECCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RKDIEPFIDTEQSKKPRSIHEMVHLGVNVGIFPPRLEETIRDFWYIRTKIIHGESTQYKS HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCH ADIMSLIHSGFEIMNILSKSLHTETFTRTYRHILEYLATEGPISKKDIANRIGQSAYANQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHCC IKLTYEPWNLIIHTHENHIAINDRGKAFLAGTLPIPESIIRLYTGDWIAVPNTQLITVAD EEEEEECEEEEEEECCCEEEECCCCCEEEEECCCCHHHHHHHHCCCEEECCCCEEEEEEE VDNDSQLGNG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA