| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898547
Identifier: 159898547
GI number: 159898547
Start: 2514968
End: 2516194
Strand: Reverse
Name: 159898547
Synonym: Haur_2023
Alternate gene names: NA
Gene position: 2516194-2514968 (Counterclockwise)
Preceding gene: 159898548
Following gene: 159898546
Centisome position: 39.65
GC content: 50.61
Gene sequence:
>1227_bases ATGAAGATCTTAGTGCTCAATCGTCAAAAGCCTCACTTAGCTCCGTTTGGCGATTGGCTTGGCGATTTAGTGCCACAGGC CCGCTTATTTACGGCTGCCAACCGTGTGCAGGGCTTTCAAGGGTTTGCGGCGATTCAGCCATTTGAGAACTATGAAGACA GTGGCCTGATTGAATTTGAGGCTTTACGGCTGCATCGTCAATCGCCAATCGAGCGAATTGTTGCAACTTCAGAGGTCGAT ATTCTGCGTGCAGGCCGCTTACGTAGCTATCTTGGGTTGCCAGGCCAACAAGCCGATAGTGCCTTGGCCTTTCGCAATAA AGTTGTGATGAAGCAACACCTGGTTAATCGCACTCAGCTGGTCAATATCCCAATCTTTCAGGCGATCAACGAGCCGTTCG ATATCATTCAATTTATCGAACAGCATGGCTACCCAGTAATCGTCAAACCAGATGATGGCAGTGGCTCGCTGGGGGCAAAA ATGCTGGCAAACGAGGATGATCTGGCCCAGTTTTTACAACAGCCGCTGCCCCGTGGTTTAGAAATTGAGTGCTTTATCCA AGGCGATCAATATCATGTCGATGGATTATTGGTCGATAACGAGGTCTGTTTCTGCTGGCCATCGCAATATCTTGGCAATG GTTTATCCTTTACCCAAGGCTGGTTTACTGCGAGCCAGATGCTTCGGCCCGAACATCACTTGACCCAGCGCTTAATCGCA GCGGCCAAAGAAGTGTTGGCTTTGCTGCCAACTCCACCCGTCACCAGCTTTCACCTTGAGTTGTTTCATACTCCTGGCGA TGAGCTGTTCTTTTGCGAAATTGCCAGCCGCACTGGTGGCGGTATGATCAACGGAACAATTGAGCAGGCATTTGGGATTA ATCTAAATCAACTCTTTATCCAAGGCCAAGCTGGCATGCCGATTGATACGAGCCGATTAAGGGCGATCACCCAACCCAAG AAGATTGTCGGTTGGGGGTTGGTTCCACCGCAAGCTGGGGTTTTTCGCGGCTATCGCCAAGCAAAACCACCCCAACCATG GGTCCTCCACTTCGATTGGAGCATTCAGGCAGGTACGCACTCACAACCAGCGCAAATGAGTGTTGATCAAGTCGGCGGGT TTATTGTTGATCTGACTGATGCTCCTAACCCCGAAGAACGCTTGATTGAGGTTTGGCGCTGGGCCGAGCACCAAGCACTG TGGGAGCCAGCAGGAGTAAATGCATGA
Upstream 100 bases:
>100_bases GCACAACCTTACGTGACCATCTAGGGCTTGATCGCCCGCTCAATCGCCCGAACAAGAGTACTGCCGAACGTGCCACGCTG GCGATTGCCCGAGGTGCTGA
Downstream 100 bases:
>100_bases CCGATCAACAATACGTGCAGGATGCTGTTGGTTGGCAACTTACGCCACGCAGTATGAATCTTCAAGGTGTTTGTTTGATC GACCCACAGGTTGGTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid Ligase Of ATP-Grasp Superfamily; Nikkomycin Biosynthesis Protein Carboxylase; NikS Protein; Biotin Carboxylase-Like Protein; ATP-Dependent Carboxylate-Amine Ligase; Nikkomycin Biosynthesis Protein SanS; Nikkomycin Biosynthesis Protein; Phosphoribosylglycinamide Synthetase; Carbamoyl-Phosphate-Synthetase; D-Alanine-D-Alanine Ligase A; LOW QUALITY PROTEIN Biotin Carboxylase
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKILVLNRQKPHLAPFGDWLGDLVPQARLFTAANRVQGFQGFAAIQPFENYEDSGLIEFEALRLHRQSPIERIVATSEVD ILRAGRLRSYLGLPGQQADSALAFRNKVVMKQHLVNRTQLVNIPIFQAINEPFDIIQFIEQHGYPVIVKPDDGSGSLGAK MLANEDDLAQFLQQPLPRGLEIECFIQGDQYHVDGLLVDNEVCFCWPSQYLGNGLSFTQGWFTASQMLRPEHHLTQRLIA AAKEVLALLPTPPVTSFHLELFHTPGDELFFCEIASRTGGGMINGTIEQAFGINLNQLFIQGQAGMPIDTSRLRAITQPK KIVGWGLVPPQAGVFRGYRQAKPPQPWVLHFDWSIQAGTHSQPAQMSVDQVGGFIVDLTDAPNPEERLIEVWRWAEHQAL WEPAGVNA
Sequences:
>Translated_408_residues MKILVLNRQKPHLAPFGDWLGDLVPQARLFTAANRVQGFQGFAAIQPFENYEDSGLIEFEALRLHRQSPIERIVATSEVD ILRAGRLRSYLGLPGQQADSALAFRNKVVMKQHLVNRTQLVNIPIFQAINEPFDIIQFIEQHGYPVIVKPDDGSGSLGAK MLANEDDLAQFLQQPLPRGLEIECFIQGDQYHVDGLLVDNEVCFCWPSQYLGNGLSFTQGWFTASQMLRPEHHLTQRLIA AAKEVLALLPTPPVTSFHLELFHTPGDELFFCEIASRTGGGMINGTIEQAFGINLNQLFIQGQAGMPIDTSRLRAITQPK KIVGWGLVPPQAGVFRGYRQAKPPQPWVLHFDWSIQAGTHSQPAQMSVDQVGGFIVDLTDAPNPEERLIEVWRWAEHQAL WEPAGVNA >Mature_408_residues MKILVLNRQKPHLAPFGDWLGDLVPQARLFTAANRVQGFQGFAAIQPFENYEDSGLIEFEALRLHRQSPIERIVATSEVD ILRAGRLRSYLGLPGQQADSALAFRNKVVMKQHLVNRTQLVNIPIFQAINEPFDIIQFIEQHGYPVIVKPDDGSGSLGAK MLANEDDLAQFLQQPLPRGLEIECFIQGDQYHVDGLLVDNEVCFCWPSQYLGNGLSFTQGWFTASQMLRPEHHLTQRLIA AAKEVLALLPTPPVTSFHLELFHTPGDELFFCEIASRTGGGMINGTIEQAFGINLNQLFIQGQAGMPIDTSRLRAITQPK KIVGWGLVPPQAGVFRGYRQAKPPQPWVLHFDWSIQAGTHSQPAQMSVDQVGGFIVDLTDAPNPEERLIEVWRWAEHQAL WEPAGVNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45579; Mature: 45579
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVLNRQKPHLAPFGDWLGDLVPQARLFTAANRVQGFQGFAAIQPFENYEDSGLIEFE CEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEHH ALRLHRQSPIERIVATSEVDILRAGRLRSYLGLPGQQADSALAFRNKVVMKQHLVNRTQL HHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEE VNIPIFQAINEPFDIIQFIEQHGYPVIVKPDDGSGSLGAKMLANEDDLAQFLQQPLPRGL ECCHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHCCCCC EIECFIQGDQYHVDGLLVDNEVCFCWPSQYLGNGLSFTQGWFTASQMLRPEHHLTQRLIA EEEEEEECCEEEECEEEECCCEEEEECHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH AAKEVLALLPTPPVTSFHLELFHTPGDELFFCEIASRTGGGMINGTIEQAFGINLNQLFI HHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEECHHHHHHCCCCEEEEE QGQAGMPIDTSRLRAITQPKKIVGWGLVPPQAGVFRGYRQAKPPQPWVLHFDWSIQAGTH ECCCCCCCCHHHHHHHCCCCHHEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCC SQPAQMSVDQVGGFIVDLTDAPNPEERLIEVWRWAEHQALWEPAGVNA CCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKILVLNRQKPHLAPFGDWLGDLVPQARLFTAANRVQGFQGFAAIQPFENYEDSGLIEFE CEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEHH ALRLHRQSPIERIVATSEVDILRAGRLRSYLGLPGQQADSALAFRNKVVMKQHLVNRTQL HHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEE VNIPIFQAINEPFDIIQFIEQHGYPVIVKPDDGSGSLGAKMLANEDDLAQFLQQPLPRGL ECCHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHCCCCC EIECFIQGDQYHVDGLLVDNEVCFCWPSQYLGNGLSFTQGWFTASQMLRPEHHLTQRLIA EEEEEEECCEEEECEEEECCCEEEEECHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH AAKEVLALLPTPPVTSFHLELFHTPGDELFFCEIASRTGGGMINGTIEQAFGINLNQLFI HHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEECHHHHHHCCCCEEEEE QGQAGMPIDTSRLRAITQPKKIVGWGLVPPQAGVFRGYRQAKPPQPWVLHFDWSIQAGTH ECCCCCCCCHHHHHHHCCCCHHEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCC SQPAQMSVDQVGGFIVDLTDAPNPEERLIEVWRWAEHQALWEPAGVNA CCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA