| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898542
Identifier: 159898542
GI number: 159898542
Start: 2507577
End: 2508776
Strand: Direct
Name: 159898542
Synonym: Haur_2018
Alternate gene names: NA
Gene position: 2507577-2508776 (Clockwise)
Preceding gene: 159898541
Following gene: 159898543
Centisome position: 39.51
GC content: 52.17
Gene sequence:
>1200_bases ATGAGTACCAGACGGTTCAGTCTTAGAATGCTCAGCCTGCTCACCTTACTGAGCATCACTATCCTACCCGCTGCGGCGAC CGCTGATTTTGACCTGTTAGATAGCCAAAATGTGACTGCGGTGGATAACGTCTCAACCGCGAATGGAGGAACCTTCAATG GTGGGCGCGTCTATGTGGCGGCCACCAAACAAACCAGTAACAATAACGCCCTGCGGATCAATGGAATCTATACCGATGCC AACGGGATTATTAGCACCAACTTCGTGTTGACCGAAGGCCCCATTCACGATGTTGATGTGACCGAATATCGCGATAATAT CGTCGTCGTTGCCGCGATAACCAGCGGTCACATCAAATTGATTGCCTTCAAAACCAATGCCACGGGTGCCAATCGGCTGG AGCGGCTTGGGGATACGGCGGGCGTTGCGACGATTCCAGTCAGCACCAATGGGGTGCATGTGATTCGGGTTGGCCCAACG CCCAATCCCTCAATCGTATCGGCGGCATACCTGAGCGATGGGCGTGCCCGTTTTGATGTATGGACACTTAGCACTGATGG TCAGAACTTTACCCATCAATCAACCAAGATCTCGGCTGGCCAAACGGGCCGACTCGCGATGAGTGCCGATTATATTAAGA GTTCGCGCAACTTCGCCATGGCTGCCCAAGATGCGAACGGCCATATGATCGTCACGCTGTGGCAGGTTGATGTTCATGGC AATCTGCTGAAATTGGCCCAAAGTGCCCGTGGGGTGGTTGATTTTATGGATATTACCCTATCGGGGAATCGAATCTACAC GGCAGCAACCAATACCGACTCTCCCTTGGCAACGGCTGAAGTTGCACGCTGGACGGTCGCTGCGTCTGAGAGCGGTGCAC CGTTGCCCAATATCTTGGATTACAAAGACGAAGCAACGCTGCCCATCCGATTTTCGGGTAGAATCCAGCTTGTTGATCAA GGGAATGAGGTTGTGGTCATTGGCCAAACCGGCAGCGAAACCGACGACGATGATTGGCAAACCATGCGCTTTTTCACCTA TACCTTCAACGGGAGCACTCTGAGCCTCGCCAGCCCGATCAAAGAACTACCCAATCAGGCTGATGGCTTCGATGTCGTCA AAAACGATAGCCGCTTCTTCTTGATGATTGATGGCTTTGTCAATAGCCAAGATAGCCATCAGGTGTGGCAGTATAATTAG
Upstream 100 bases:
>100_bases GTGCAATGGAATTGCACCGTCACGAGGATTGATCGATATCCGTTACCCACGTATTACCACAATAGCTAACCTATGTTCTT AAGTAATTTTGGAGGTATCC
Downstream 100 bases:
>100_bases CCCACCACTGGCAGCGGATGGTTCATCCCTCCGCTGGGATGAACCATCCGCGACTTTCACGGGGTTCGGAAACCCGCATA CCACCCACGAACGGTCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSTRRFSLRMLSLLTLLSITILPAAATADFDLLDSQNVTAVDNVSTANGGTFNGGRVYVAATKQTSNNNALRINGIYTDA NGIISTNFVLTEGPIHDVDVTEYRDNIVVVAAITSGHIKLIAFKTNATGANRLERLGDTAGVATIPVSTNGVHVIRVGPT PNPSIVSAAYLSDGRARFDVWTLSTDGQNFTHQSTKISAGQTGRLAMSADYIKSSRNFAMAAQDANGHMIVTLWQVDVHG NLLKLAQSARGVVDFMDITLSGNRIYTAATNTDSPLATAEVARWTVAASESGAPLPNILDYKDEATLPIRFSGRIQLVDQ GNEVVVIGQTGSETDDDDWQTMRFFTYTFNGSTLSLASPIKELPNQADGFDVVKNDSRFFLMIDGFVNSQDSHQVWQYN
Sequences:
>Translated_399_residues MSTRRFSLRMLSLLTLLSITILPAAATADFDLLDSQNVTAVDNVSTANGGTFNGGRVYVAATKQTSNNNALRINGIYTDA NGIISTNFVLTEGPIHDVDVTEYRDNIVVVAAITSGHIKLIAFKTNATGANRLERLGDTAGVATIPVSTNGVHVIRVGPT PNPSIVSAAYLSDGRARFDVWTLSTDGQNFTHQSTKISAGQTGRLAMSADYIKSSRNFAMAAQDANGHMIVTLWQVDVHG NLLKLAQSARGVVDFMDITLSGNRIYTAATNTDSPLATAEVARWTVAASESGAPLPNILDYKDEATLPIRFSGRIQLVDQ GNEVVVIGQTGSETDDDDWQTMRFFTYTFNGSTLSLASPIKELPNQADGFDVVKNDSRFFLMIDGFVNSQDSHQVWQYN >Mature_398_residues STRRFSLRMLSLLTLLSITILPAAATADFDLLDSQNVTAVDNVSTANGGTFNGGRVYVAATKQTSNNNALRINGIYTDAN GIISTNFVLTEGPIHDVDVTEYRDNIVVVAAITSGHIKLIAFKTNATGANRLERLGDTAGVATIPVSTNGVHVIRVGPTP NPSIVSAAYLSDGRARFDVWTLSTDGQNFTHQSTKISAGQTGRLAMSADYIKSSRNFAMAAQDANGHMIVTLWQVDVHGN LLKLAQSARGVVDFMDITLSGNRIYTAATNTDSPLATAEVARWTVAASESGAPLPNILDYKDEATLPIRFSGRIQLVDQG NEVVVIGQTGSETDDDDWQTMRFFTYTFNGSTLSLASPIKELPNQADGFDVVKNDSRFFLMIDGFVNSQDSHQVWQYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43068; Mature: 42936
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRFSLRMLSLLTLLSITILPAAATADFDLLDSQNVTAVDNVSTANGGTFNGGRVYVA CCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCEEEEE ATKQTSNNNALRINGIYTDANGIISTNFVLTEGPIHDVDVTEYRDNIVVVAAITSGHIKL EEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHEECCCEEEEEEEECCCEEE IAFKTNATGANRLERLGDTAGVATIPVSTNGVHVIRVGPTPNPSIVSAAYLSDGRARFDV EEEEECCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEE WTLSTDGQNFTHQSTKISAGQTGRLAMSADYIKSSRNFAMAAQDANGHMIVTLWQVDVHG EEEECCCCCCEECCEEECCCCCCEEEEEHHHHHCCCCEEEEEECCCCCEEEEEEEEECCC NLLKLAQSARGVVDFMDITLSGNRIYTAATNTDSPLATAEVARWTVAASESGAPLPNILD CHHHHHHHCCCEEEEEEEEEECCEEEEEECCCCCCCEEHHEEEEEEEECCCCCCCCCCCC YKDEATLPIRFSGRIQLVDQGNEVVVIGQTGSETDDDDWQTMRFFTYTFNGSTLSLASPI CCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEHHHHH KELPNQADGFDVVKNDSRFFLMIDGFVNSQDSHQVWQYN HHCCCCCCCCEEEECCCEEEEEEECCCCCCCCCEEEECC >Mature Secondary Structure STRRFSLRMLSLLTLLSITILPAAATADFDLLDSQNVTAVDNVSTANGGTFNGGRVYVA CCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCEEEEE ATKQTSNNNALRINGIYTDANGIISTNFVLTEGPIHDVDVTEYRDNIVVVAAITSGHIKL EEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHEECCCEEEEEEEECCCEEE IAFKTNATGANRLERLGDTAGVATIPVSTNGVHVIRVGPTPNPSIVSAAYLSDGRARFDV EEEEECCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEE WTLSTDGQNFTHQSTKISAGQTGRLAMSADYIKSSRNFAMAAQDANGHMIVTLWQVDVHG EEEECCCCCCEECCEEECCCCCCEEEEEHHHHHCCCCEEEEEECCCCCEEEEEEEEECCC NLLKLAQSARGVVDFMDITLSGNRIYTAATNTDSPLATAEVARWTVAASESGAPLPNILD CHHHHHHHCCCEEEEEEEEEECCEEEEEECCCCCCCEEHHEEEEEEEECCCCCCCCCCCC YKDEATLPIRFSGRIQLVDQGNEVVVIGQTGSETDDDDWQTMRFFTYTFNGSTLSLASPI CCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEHHHHH KELPNQADGFDVVKNDSRFFLMIDGFVNSQDSHQVWQYN HHCCCCCCCCEEEECCCEEEEEEECCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA