| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is hisD [H]
Identifier: 159898537
GI number: 159898537
Start: 2502613
End: 2503947
Strand: Direct
Name: hisD [H]
Synonym: Haur_2013
Alternate gene names: 159898537
Gene position: 2502613-2503947 (Clockwise)
Preceding gene: 159898535
Following gene: 159898539
Centisome position: 39.43
GC content: 53.03
Gene sequence:
>1335_bases ATGCCAATTCAGCTTTATACCGATCTTGCGCAGGCTCAACAAGGCCCATTAGCACGAGTCGCCTTCGATACGGTCGAAGT TCCAGAGCGTTTACAACAAAGCCTCGACCACATGTTTGGGGTTGGCACAACGCCTGCCGCTGCGGTTGATCAGATCTTAG CCAGTGTGCGGCGCGATGGCGATGCGGCCTTAGAGCACTGGAGCCGCACGATCGAAGGCGTTGAATTAAGCCAATTTGAG GTCGATCGCTCGGCGATTGAAGCCGCCTATAGCCAACTTGATCCATTATTGGTTGAAGCGTTACGGATCTCTGCTGCCGA GATCGAGCGTTTTCATCGTAAGCAAACCCGCCAAAGTTGGGTTGATTGGTCGGATGAAGGAGCACTGGGTCAGATTGTTC TACCACTTGAGCGGATTGGGGCGTATGCGCCAGGTGGCACAGCTCCCCTTCCATCGTCATTATTGATGGGGGTAATTCCA GCTAAGGTAGCTGGAGTACGCGAGATTATTGTGTGCTCGCCGCCGCAACGTGATACTGGCGAGATCTCGCCGTTGGTCTT GGTAGCTGCCGATATTGCTGGAGTCCACCGAATTTTTCGTTTGGGCGGGGCACAGGCCATTGCTGCGATGGCCTATGGCA CGAATAGTGTGCCACATGTCGATAAAATTATCGGTCCAGGCAATCTGTTTGTGGTGTTGGCCAAAAAGGCGGTGTATGGC ACGGTTGATATTGAAGCCTTGCCCGGCCCTACCGAAACCATGGTGATTGCCGATGCTGATGCTAACCCTGAGCTAGTGGC TGCCGATTTACTCGCCCAAGCCGAACATGATTTGCTGGCTTCGGCGATTTTGCTTACGCCTTCGTTGGAATTGGCCGAAA AAGTCCAGGTCGCGGTTGCTCGTCAACTCGAAGAGCTTGAACGAGCTGAAATCGCGGCCCAAGCGCTCACCAATCGCTCA GGGATTGTGCTTGTCCCTTCATTAGAGGTTGCATTCGATTTAAGTAATGCCTATGGCCCTGAGCACCTCTGTTTATTAGT CAACGATCCTTGGCAATATGTGGGTAAAGTACGCAATGCTGGGGGCATTTTCCTTGGTGAACGTTCGTTTGAAGTGTTGG GTGATTATGTGGCTGGGCCATCGCACATTATGCCCACTGGTGGTACGGCTCGCTATGCCTCGCCAGTCAATGTTGACCAC TTCCGAAAAGTTATTTCGTTGGTTGGCTTGAACGAAAAAGCCTTGCAACGATTAGGGCCAGTCGCTCAGCGTTTGGCTGA GGCCGAAGGACTGACCGCCCATGCGGCGGCTGTACGCCGCCGTTTAGAGCAATAA
Upstream 100 bases:
>100_bases AGCATCTGGATCACCATTGTGCTGCCATGCTTCGCCTTCATTTGCGCTCAACGCCGAATTTGGTAGCATGCTGCTAGTTC ATTGGATAGATGGAGCATAC
Downstream 100 bases:
>100_bases TGTCGTTTATCAGTGGATACTTCTCTTGTGCTTTGTGATAGGCCAAAACGGCTGCGGGGTGCGAGACCAGCAAGCCTACC TTGTATTGCTGGCATCCACT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MPIQLYTDLAQAQQGPLARVAFDTVEVPERLQQSLDHMFGVGTTPAAAVDQILASVRRDGDAALEHWSRTIEGVELSQFE VDRSAIEAAYSQLDPLLVEALRISAAEIERFHRKQTRQSWVDWSDEGALGQIVLPLERIGAYAPGGTAPLPSSLLMGVIP AKVAGVREIIVCSPPQRDTGEISPLVLVAADIAGVHRIFRLGGAQAIAAMAYGTNSVPHVDKIIGPGNLFVVLAKKAVYG TVDIEALPGPTETMVIADADANPELVAADLLAQAEHDLLASAILLTPSLELAEKVQVAVARQLEELERAEIAAQALTNRS GIVLVPSLEVAFDLSNAYGPEHLCLLVNDPWQYVGKVRNAGGIFLGERSFEVLGDYVAGPSHIMPTGGTARYASPVNVDH FRKVISLVGLNEKALQRLGPVAQRLAEAEGLTAHAAAVRRRLEQ
Sequences:
>Translated_444_residues MPIQLYTDLAQAQQGPLARVAFDTVEVPERLQQSLDHMFGVGTTPAAAVDQILASVRRDGDAALEHWSRTIEGVELSQFE VDRSAIEAAYSQLDPLLVEALRISAAEIERFHRKQTRQSWVDWSDEGALGQIVLPLERIGAYAPGGTAPLPSSLLMGVIP AKVAGVREIIVCSPPQRDTGEISPLVLVAADIAGVHRIFRLGGAQAIAAMAYGTNSVPHVDKIIGPGNLFVVLAKKAVYG TVDIEALPGPTETMVIADADANPELVAADLLAQAEHDLLASAILLTPSLELAEKVQVAVARQLEELERAEIAAQALTNRS GIVLVPSLEVAFDLSNAYGPEHLCLLVNDPWQYVGKVRNAGGIFLGERSFEVLGDYVAGPSHIMPTGGTARYASPVNVDH FRKVISLVGLNEKALQRLGPVAQRLAEAEGLTAHAAAVRRRLEQ >Mature_443_residues PIQLYTDLAQAQQGPLARVAFDTVEVPERLQQSLDHMFGVGTTPAAAVDQILASVRRDGDAALEHWSRTIEGVELSQFEV DRSAIEAAYSQLDPLLVEALRISAAEIERFHRKQTRQSWVDWSDEGALGQIVLPLERIGAYAPGGTAPLPSSLLMGVIPA KVAGVREIIVCSPPQRDTGEISPLVLVAADIAGVHRIFRLGGAQAIAAMAYGTNSVPHVDKIIGPGNLFVVLAKKAVYGT VDIEALPGPTETMVIADADANPELVAADLLAQAEHDLLASAILLTPSLELAEKVQVAVARQLEELERAEIAAQALTNRSG IVLVPSLEVAFDLSNAYGPEHLCLLVNDPWQYVGKVRNAGGIFLGERSFEVLGDYVAGPSHIMPTGGTARYASPVNVDHF RKVISLVGLNEKALQRLGPVAQRLAEAEGLTAHAAAVRRRLEQ
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=400, Percent_Identity=40.5, Blast_Score=280, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6319819, Length=408, Percent_Identity=38.9705882352941, Blast_Score=263, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47476; Mature: 47345
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQLYTDLAQAQQGPLARVAFDTVEVPERLQQSLDHMFGVGTTPAAAVDQILASVRRDG CCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DAALEHWSRTIEGVELSQFEVDRSAIEAAYSQLDPLLVEALRISAAEIERFHRKQTRQSW HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDWSDEGALGQIVLPLERIGAYAPGGTAPLPSSLLMGVIPAKVAGVREIIVCSPPQRDTG CCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCC EISPLVLVAADIAGVHRIFRLGGAQAIAAMAYGTNSVPHVDKIIGPGNLFVVLAKKAVYG CCCHHEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEECHHEEE TVDIEALPGPTETMVIADADANPELVAADLLAQAEHDLLASAILLTPSLELAEKVQVAVA EEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RQLEELERAEIAAQALTNRSGIVLVPSLEVAFDLSNAYGPEHLCLLVNDPWQYVGKVRNA HHHHHHHHHHHHHHHHCCCCCEEEEECHHEEEECCCCCCCCEEEEEECCCHHHHHHHCCC GGIFLGERSFEVLGDYVAGPSHIMPTGGTARYASPVNVDHFRKVISLVGLNEKALQRLGP CCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH VAQRLAEAEGLTAHAAAVRRRLEQ HHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure PIQLYTDLAQAQQGPLARVAFDTVEVPERLQQSLDHMFGVGTTPAAAVDQILASVRRDG CCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DAALEHWSRTIEGVELSQFEVDRSAIEAAYSQLDPLLVEALRISAAEIERFHRKQTRQSW HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDWSDEGALGQIVLPLERIGAYAPGGTAPLPSSLLMGVIPAKVAGVREIIVCSPPQRDTG CCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCC EISPLVLVAADIAGVHRIFRLGGAQAIAAMAYGTNSVPHVDKIIGPGNLFVVLAKKAVYG CCCHHEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEECHHEEE TVDIEALPGPTETMVIADADANPELVAADLLAQAEHDLLASAILLTPSLELAEKVQVAVA EEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RQLEELERAEIAAQALTNRSGIVLVPSLEVAFDLSNAYGPEHLCLLVNDPWQYVGKVRNA HHHHHHHHHHHHHHHHCCCCCEEEEECHHEEEECCCCCCCCEEEEEECCCHHHHHHHCCC GGIFLGERSFEVLGDYVAGPSHIMPTGGTARYASPVNVDHFRKVISLVGLNEKALQRLGP CCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH VAQRLAEAEGLTAHAAAVRRRLEQ HHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]