| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is yjeS [C]
Identifier: 159898528
GI number: 159898528
Start: 2482676
End: 2484028
Strand: Direct
Name: yjeS [C]
Synonym: Haur_2004
Alternate gene names: 159898528
Gene position: 2482676-2484028 (Clockwise)
Preceding gene: 159898527
Following gene: 159898529
Centisome position: 39.12
GC content: 58.39
Gene sequence:
>1353_bases ATGGCTCATTTGCAGAATCATCCGACAGTGCTGCGCTTTAGACAGGAGCGGGCTATTCAGTCAACCGAGGATTTTCCGAG GCTGGCCGCTACGACGCTCCGCGATCTTTGCCTCGACTCTGGCGCAGACGATGTTGGCTTCGTATCCATTGATCGGGCGG AGCTTGACAATCAGCGGGCAGAGATCTTGGAAAATTTCCCCTGGGCACGCAGCCTGATCAGTATCGTCTGCCGCATGAAT CGCGAGCCGATTCGCAGCCCGGCGCGATCGGTTGCCAATTTGGAGTTCCACCACACGGTTGATCATGCCGACGATGCGGC GCATACGATTGTCACGGCACTGGAAGCACAGGGCGTGCGTGCGGCCAATCCAGCCAGCGGCTTTCCGATGGAAGTCGAGC GATTTCCCGGCAAAAGCTGGATCATCTCGCACAAACCAGTGGCGGTGGCGGCAGGACTGGGACAGATGGGTATTCACCGC AACGTGATCCACCCACGCTTCGGCAATTTCATCTTGCTGGGTACGATCGTCACCGATGCCGTAATTTCGGCAGAGGATAA GCCGATCGACTACAATCCCTGTCTGGAATGCAAGCTTTGCGTGGCGGCATGTCCGGTCGGGGCAATTAGTCCGTCTGGCG ACTTCGACTTTGCAGCTTGCTTCACCCACAATTATCGCGAGTTTATGGGTGGCTTCAATGATTGGGTGGAAACGCTCGTA TCAAGCAACGATGCCGGGGAGTATTACGAGCGCACCACAGCCAGCGAGACAGCCTCGATGTGGCAAAGCCTCAGCTTTGG TGCCTCGTATAAGGCGGCCTACTGCATCGCCGTCTGCCCCGCTGGTGACGACGTTATCGCGCCTTTTCTGACTAATCGGG CTGGCTTTCTGAAGGAGGTAGTCAAGCCGTTGCAAGATAAGGTTGAGACCATTTACGTGTCAACCGAAACGACGGCGGCC TACGTGCGGCGACGCTTTCCGCATAAGCATGTCAAGCGGGTTGGCAGCGGCATCCGCTTCTCCTCGGTCGAAGCCTTCGT TAAGAGCCTGCCCCGGGTTTTTCGTCCGACGGCTGCCGAAGGGGTAAACGCCGTCTACCATCTGGTTTTCAGCGGAGCCG AGGACTATGCTGCAACCGTCAGCATCGGCGACGGCCCAGATTCGCGAAAGCGAGTGACGATTACGGAGGGTTGCGTCGGC CATGCCGACCTGCGGATCAGCGCCGACAGCCGAACATGGCTCGGGATAGTGGCTGGCGATCGCACCCCGACATGGGCGCT TGTCCGACGCAAGTTGCGATTACGTGGCTCGCTGCGGTTGATGAAGGTGTTTCGCGCCTGCTTCGCGGCCTGA
Upstream 100 bases:
>100_bases CAGTTCGGCGATTTACTTGATACGCTGAAAACGCTGCGCCGTGGCGTTCGCTAATTTTTTTGATCATTTACGTGTATATA CACCTATATCTGGAGGATCT
Downstream 100 bases:
>100_bases GACGGCGCTGTTACGCGTAGGCTAATCGAGACACGGTAAGGATGTTCTGTATGTGCTGTCGATCCAGTCATTCCAATACA TCCTCAGATAATCGCCTATG
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MAHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRAEILENFPWARSLISIVCRMN REPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVRAANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHR NVIHPRFGNFILLGTIVTDAVISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEVVKPLQDKVETIYVSTETTAA YVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAEGVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVG HADLRISADSRTWLGIVAGDRTPTWALVRRKLRLRGSLRLMKVFRACFAA
Sequences:
>Translated_450_residues MAHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRAEILENFPWARSLISIVCRMN REPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVRAANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHR NVIHPRFGNFILLGTIVTDAVISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEVVKPLQDKVETIYVSTETTAA YVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAEGVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVG HADLRISADSRTWLGIVAGDRTPTWALVRRKLRLRGSLRLMKVFRACFAA >Mature_449_residues AHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRAEILENFPWARSLISIVCRMNR EPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVRAANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHRN VIHPRFGNFILLGTIVTDAVISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLVS SNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEVVKPLQDKVETIYVSTETTAAY VRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAEGVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVGH ADLRISADSRTWLGIVAGDRTPTWALVRRKLRLRGSLRLMKVFRACFAA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49494; Mature: 49363
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRA CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCHHHH EILENFPWARSLISIVCRMNREPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVR HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCC AANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHRNVIHPRFGNFILLGTIVTDA CCCCCCCCCCCHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHH VISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEV CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHH VKPLQDKVETIYVSTETTAAYVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAE HHHHHHHHHEEEEECCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH GVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVGHADLRISADSRTWLGIVAGD HHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEECC RTPTWALVRRKLRLRGSLRLMKVFRACFAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRA CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCHHHH EILENFPWARSLISIVCRMNREPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVR HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCC AANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHRNVIHPRFGNFILLGTIVTDA CCCCCCCCCCCHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHH VISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEV CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHH VKPLQDKVETIYVSTETTAAYVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAE HHHHHHHHHEEEEECCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH GVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVGHADLRISADSRTWLGIVAGD HHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEECC RTPTWALVRRKLRLRGSLRLMKVFRACFAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA