Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yjeS [C]

Identifier: 159898528

GI number: 159898528

Start: 2482676

End: 2484028

Strand: Direct

Name: yjeS [C]

Synonym: Haur_2004

Alternate gene names: 159898528

Gene position: 2482676-2484028 (Clockwise)

Preceding gene: 159898527

Following gene: 159898529

Centisome position: 39.12

GC content: 58.39

Gene sequence:

>1353_bases
ATGGCTCATTTGCAGAATCATCCGACAGTGCTGCGCTTTAGACAGGAGCGGGCTATTCAGTCAACCGAGGATTTTCCGAG
GCTGGCCGCTACGACGCTCCGCGATCTTTGCCTCGACTCTGGCGCAGACGATGTTGGCTTCGTATCCATTGATCGGGCGG
AGCTTGACAATCAGCGGGCAGAGATCTTGGAAAATTTCCCCTGGGCACGCAGCCTGATCAGTATCGTCTGCCGCATGAAT
CGCGAGCCGATTCGCAGCCCGGCGCGATCGGTTGCCAATTTGGAGTTCCACCACACGGTTGATCATGCCGACGATGCGGC
GCATACGATTGTCACGGCACTGGAAGCACAGGGCGTGCGTGCGGCCAATCCAGCCAGCGGCTTTCCGATGGAAGTCGAGC
GATTTCCCGGCAAAAGCTGGATCATCTCGCACAAACCAGTGGCGGTGGCGGCAGGACTGGGACAGATGGGTATTCACCGC
AACGTGATCCACCCACGCTTCGGCAATTTCATCTTGCTGGGTACGATCGTCACCGATGCCGTAATTTCGGCAGAGGATAA
GCCGATCGACTACAATCCCTGTCTGGAATGCAAGCTTTGCGTGGCGGCATGTCCGGTCGGGGCAATTAGTCCGTCTGGCG
ACTTCGACTTTGCAGCTTGCTTCACCCACAATTATCGCGAGTTTATGGGTGGCTTCAATGATTGGGTGGAAACGCTCGTA
TCAAGCAACGATGCCGGGGAGTATTACGAGCGCACCACAGCCAGCGAGACAGCCTCGATGTGGCAAAGCCTCAGCTTTGG
TGCCTCGTATAAGGCGGCCTACTGCATCGCCGTCTGCCCCGCTGGTGACGACGTTATCGCGCCTTTTCTGACTAATCGGG
CTGGCTTTCTGAAGGAGGTAGTCAAGCCGTTGCAAGATAAGGTTGAGACCATTTACGTGTCAACCGAAACGACGGCGGCC
TACGTGCGGCGACGCTTTCCGCATAAGCATGTCAAGCGGGTTGGCAGCGGCATCCGCTTCTCCTCGGTCGAAGCCTTCGT
TAAGAGCCTGCCCCGGGTTTTTCGTCCGACGGCTGCCGAAGGGGTAAACGCCGTCTACCATCTGGTTTTCAGCGGAGCCG
AGGACTATGCTGCAACCGTCAGCATCGGCGACGGCCCAGATTCGCGAAAGCGAGTGACGATTACGGAGGGTTGCGTCGGC
CATGCCGACCTGCGGATCAGCGCCGACAGCCGAACATGGCTCGGGATAGTGGCTGGCGATCGCACCCCGACATGGGCGCT
TGTCCGACGCAAGTTGCGATTACGTGGCTCGCTGCGGTTGATGAAGGTGTTTCGCGCCTGCTTCGCGGCCTGA

Upstream 100 bases:

>100_bases
CAGTTCGGCGATTTACTTGATACGCTGAAAACGCTGCGCCGTGGCGTTCGCTAATTTTTTTGATCATTTACGTGTATATA
CACCTATATCTGGAGGATCT

Downstream 100 bases:

>100_bases
GACGGCGCTGTTACGCGTAGGCTAATCGAGACACGGTAAGGATGTTCTGTATGTGCTGTCGATCCAGTCATTCCAATACA
TCCTCAGATAATCGCCTATG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MAHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRAEILENFPWARSLISIVCRMN
REPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVRAANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHR
NVIHPRFGNFILLGTIVTDAVISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV
SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEVVKPLQDKVETIYVSTETTAA
YVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAEGVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVG
HADLRISADSRTWLGIVAGDRTPTWALVRRKLRLRGSLRLMKVFRACFAA

Sequences:

>Translated_450_residues
MAHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRAEILENFPWARSLISIVCRMN
REPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVRAANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHR
NVIHPRFGNFILLGTIVTDAVISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV
SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEVVKPLQDKVETIYVSTETTAA
YVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAEGVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVG
HADLRISADSRTWLGIVAGDRTPTWALVRRKLRLRGSLRLMKVFRACFAA
>Mature_449_residues
AHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRAEILENFPWARSLISIVCRMNR
EPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVRAANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHRN
VIHPRFGNFILLGTIVTDAVISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLVS
SNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEVVKPLQDKVETIYVSTETTAAY
VRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAEGVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVGH
ADLRISADSRTWLGIVAGDRTPTWALVRRKLRLRGSLRLMKVFRACFAA

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49494; Mature: 49363

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRA
CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCHHHH
EILENFPWARSLISIVCRMNREPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVR
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCC
AANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHRNVIHPRFGNFILLGTIVTDA
CCCCCCCCCCCHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
VISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV
HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHH
VKPLQDKVETIYVSTETTAAYVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAE
HHHHHHHHHEEEEECCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
GVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVGHADLRISADSRTWLGIVAGD
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEECC
RTPTWALVRRKLRLRGSLRLMKVFRACFAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHLQNHPTVLRFRQERAIQSTEDFPRLAATTLRDLCLDSGADDVGFVSIDRAELDNQRA
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCHHHH
EILENFPWARSLISIVCRMNREPIRSPARSVANLEFHHTVDHADDAAHTIVTALEAQGVR
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCC
AANPASGFPMEVERFPGKSWIISHKPVAVAAGLGQMGIHRNVIHPRFGNFILLGTIVTDA
CCCCCCCCCCCHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHH
VISAEDKPIDYNPCLECKLCVAACPVGAISPSGDFDFAACFTHNYREFMGGFNDWVETLV
HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
SSNDAGEYYERTTASETASMWQSLSFGASYKAAYCIAVCPAGDDVIAPFLTNRAGFLKEV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHH
VKPLQDKVETIYVSTETTAAYVRRRFPHKHVKRVGSGIRFSSVEAFVKSLPRVFRPTAAE
HHHHHHHHHEEEEECCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
GVNAVYHLVFSGAEDYAATVSIGDGPDSRKRVTITEGCVGHADLRISADSRTWLGIVAGD
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEECC
RTPTWALVRRKLRLRGSLRLMKVFRACFAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA