| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898510
Identifier: 159898510
GI number: 159898510
Start: 2443419
End: 2445467
Strand: Direct
Name: 159898510
Synonym: Haur_1986
Alternate gene names: NA
Gene position: 2443419-2445467 (Clockwise)
Preceding gene: 159898509
Following gene: 159898513
Centisome position: 38.5
GC content: 49.73
Gene sequence:
>2049_bases ATGCAATACGTGGATCTGGTGATCAAGGGCTATCTTAATGCTTCAAATTATTTTCAGATGAATGTTCAAATGCGCGGTTT GGTTTCCGATGGTGGTGCGGTTGATAACATTCCAATTAGTTTAGAAACGATTACCAAATTGCGCGAACGCTATCAACGCT TGATCAAAGACTTTCATCACAGCATCTACAACCATGCGAAGCCTGAAGATCCGAGTATGTCCAGGTTGCTCACACAGGCT GCGGCTGTGGCTGTCTACCACTCTGCCGATTCGATCGAGTCCTTGCGGGCCTTGCGATCGGCGTGCGGAGAGTTTATGAC GGTATGGGATACGTCAATTAAGCCACCCGCCTTGTTTCAGGAACACTATCACCAGCTTTGGCAACTTGGTAATCAAATGC TGCAAATGCTTCCTGGTACAGCAAAAACTATTCTGCGTGACAGTATTTGGCAAACCCAATCACGCCAAGCAAAACAGGGT TTACGGGTTATTCTCGATGTTGCTGAGAATGCCCGTAGCCTGCTTGACTTACCATGGGAGTTGTTGGTGATTCCCACAGC GCATCAAACACTGGCGGCCCAGGGTATCGAGCCGCTAAATGAAGCTGAATTTTCAACCCGTTTTTTGTTTTTGCACCATC ATATGGTGTTAATTCGCCAAGTTTCGAGCATGCTGCCCTATCAGCCAATTACAATTGACCGTAATTTAGCGTTACAAGTT ATTGCGGCACCGTTAGTCCGCTCGCCAATCGATACCAGATCGTTTATTGCTGAATTAGCCCCCTTGTTTGCTGGCGAAAC ACTTGAGCGCTGGTGGAGCAGTGATCCAAATACGATTGAAACATTGCATAAGCGCTTGCTTGAACATCAACCTCAAATTG TCCAATTGTTGTGTCATGGGCATTCGCCCAAGCCCGAAGCCAAACTACAGCGTCATGATATGCTTGTAACCTATATTCTG AATAATCAACAGGTGGTTTATCGAGTTAGCTCGCATGATCTTTGGCCGATTCTGAGTGCTTCGGCACGGCTTCAGTTGGT TGTCTTAACGGTGTGTCATAGCAGTGGTGCGCAACAAACCGAAGAAAATACGGCAACTGTTAGCAATATTGCCTACGATT TGGTGCGGGCTGGCGTGCCAATGGTTATTGGAATGCAAGGAGCGATTGCCCAACATGCCGCCGCACGCTTCTGTGGAGTT TTATATACGGCCTTGCGTGAAGGCCATACGATCGAATGGGCGATCACGGCGGCACGGGCGGCGCTGAGTGGCAATCGCTG GTTTATCGATTGGACAATTCCCGTGGTGTATCGCCAAGCTGATCAACGTGAACGCCCAGCATGGCATACCCGTTTGGCCG ATTTTCTTGATGCGCGGTTACTTTCCCCTTCCTATCGCCGTGGTTTTCGAGCTGCGGTGATTGTGCTCGCTTTGGGCTTG ATCATTGGTGGCTTGAGTCGCGCAATCTTTTGGCCTAGTCAATTGAGGGTCAATCTTGAACTATTGCGCACTGGAGCGTT TCTGTGGGCCATAATTGGGGTGACTTGTACCCTACTGGTTGATCACTTTATGACCAGTTGGCGGCCCCCTCATTTAGCGC CGCATGAAATTGTTGCTCGTCGTTATGCTAGCCGTGGTGGAATGTTGTTAGGCTATGCGATTGGCGGCTGGGCTGGGGCA TTATTGCTTGGTGGGCTGTTTTTGAGCATTGGCGAATTAATCAGTCCACCGATTTGGCAAGCGCTTTTTCTGGGGCTGGT TGGTTGGTCGAGCTTGTGGGGCTATGTGGTTGCCCGCTCGGAAAGCCGTGCTGCGCATAACAATTGGCGGCTTTATCCGC AACTGTATGTAGCCAAGAATGGCTGGTTGTCGGTGTATCTTGGGATGCTCCTGCTGCTCTTTATTGTGCCATTGGGTCTG TTGACCGCCTATGGTCAAAGTCTGGTTGGGCTTATCTTGAGTTCAGGTTTGGGCAGCGCAGCGATGGGGGTAACTGCGCT GACCATGATCTACAGTTTTGATCGTGAACGGCGGGCTAAGCTGGGTTAG
Upstream 100 bases:
>100_bases GCCGACCATGTGAGCTTTCTCAAGGAAGCTGAAAGCTTGACCTAAGTTGGCTGTAGGCAGCGGCATTAAACCAAATGAAA GTCCGCGAAAGGAGCGATTG
Downstream 100 bases:
>100_bases GAATTGCTACCAGCGTAATGCTTGTGGTGGGAAAGCTGCTTAATGGTCCAAAGCGAGTTTCATGGTAAGCGCTATTCGTG CCAATGATCGGAAGCTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MQYVDLVIKGYLNASNYFQMNVQMRGLVSDGGAVDNIPISLETITKLRERYQRLIKDFHHSIYNHAKPEDPSMSRLLTQA AAVAVYHSADSIESLRALRSACGEFMTVWDTSIKPPALFQEHYHQLWQLGNQMLQMLPGTAKTILRDSIWQTQSRQAKQG LRVILDVAENARSLLDLPWELLVIPTAHQTLAAQGIEPLNEAEFSTRFLFLHHHMVLIRQVSSMLPYQPITIDRNLALQV IAAPLVRSPIDTRSFIAELAPLFAGETLERWWSSDPNTIETLHKRLLEHQPQIVQLLCHGHSPKPEAKLQRHDMLVTYIL NNQQVVYRVSSHDLWPILSASARLQLVVLTVCHSSGAQQTEENTATVSNIAYDLVRAGVPMVIGMQGAIAQHAAARFCGV LYTALREGHTIEWAITAARAALSGNRWFIDWTIPVVYRQADQRERPAWHTRLADFLDARLLSPSYRRGFRAAVIVLALGL IIGGLSRAIFWPSQLRVNLELLRTGAFLWAIIGVTCTLLVDHFMTSWRPPHLAPHEIVARRYASRGGMLLGYAIGGWAGA LLLGGLFLSIGELISPPIWQALFLGLVGWSSLWGYVVARSESRAAHNNWRLYPQLYVAKNGWLSVYLGMLLLLFIVPLGL LTAYGQSLVGLILSSGLGSAAMGVTALTMIYSFDRERRAKLG
Sequences:
>Translated_682_residues MQYVDLVIKGYLNASNYFQMNVQMRGLVSDGGAVDNIPISLETITKLRERYQRLIKDFHHSIYNHAKPEDPSMSRLLTQA AAVAVYHSADSIESLRALRSACGEFMTVWDTSIKPPALFQEHYHQLWQLGNQMLQMLPGTAKTILRDSIWQTQSRQAKQG LRVILDVAENARSLLDLPWELLVIPTAHQTLAAQGIEPLNEAEFSTRFLFLHHHMVLIRQVSSMLPYQPITIDRNLALQV IAAPLVRSPIDTRSFIAELAPLFAGETLERWWSSDPNTIETLHKRLLEHQPQIVQLLCHGHSPKPEAKLQRHDMLVTYIL NNQQVVYRVSSHDLWPILSASARLQLVVLTVCHSSGAQQTEENTATVSNIAYDLVRAGVPMVIGMQGAIAQHAAARFCGV LYTALREGHTIEWAITAARAALSGNRWFIDWTIPVVYRQADQRERPAWHTRLADFLDARLLSPSYRRGFRAAVIVLALGL IIGGLSRAIFWPSQLRVNLELLRTGAFLWAIIGVTCTLLVDHFMTSWRPPHLAPHEIVARRYASRGGMLLGYAIGGWAGA LLLGGLFLSIGELISPPIWQALFLGLVGWSSLWGYVVARSESRAAHNNWRLYPQLYVAKNGWLSVYLGMLLLLFIVPLGL LTAYGQSLVGLILSSGLGSAAMGVTALTMIYSFDRERRAKLG >Mature_682_residues MQYVDLVIKGYLNASNYFQMNVQMRGLVSDGGAVDNIPISLETITKLRERYQRLIKDFHHSIYNHAKPEDPSMSRLLTQA AAVAVYHSADSIESLRALRSACGEFMTVWDTSIKPPALFQEHYHQLWQLGNQMLQMLPGTAKTILRDSIWQTQSRQAKQG LRVILDVAENARSLLDLPWELLVIPTAHQTLAAQGIEPLNEAEFSTRFLFLHHHMVLIRQVSSMLPYQPITIDRNLALQV IAAPLVRSPIDTRSFIAELAPLFAGETLERWWSSDPNTIETLHKRLLEHQPQIVQLLCHGHSPKPEAKLQRHDMLVTYIL NNQQVVYRVSSHDLWPILSASARLQLVVLTVCHSSGAQQTEENTATVSNIAYDLVRAGVPMVIGMQGAIAQHAAARFCGV LYTALREGHTIEWAITAARAALSGNRWFIDWTIPVVYRQADQRERPAWHTRLADFLDARLLSPSYRRGFRAAVIVLALGL IIGGLSRAIFWPSQLRVNLELLRTGAFLWAIIGVTCTLLVDHFMTSWRPPHLAPHEIVARRYASRGGMLLGYAIGGWAGA LLLGGLFLSIGELISPPIWQALFLGLVGWSSLWGYVVARSESRAAHNNWRLYPQLYVAKNGWLSVYLGMLLLLFIVPLGL LTAYGQSLVGLILSSGLGSAAMGVTALTMIYSFDRERRAKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76308; Mature: 76308
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYVDLVIKGYLNASNYFQMNVQMRGLVSDGGAVDNIPISLETITKLRERYQRLIKDFHH CCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SIYNHAKPEDPSMSRLLTQAAAVAVYHSADSIESLRALRSACGEFMTVWDTSIKPPALFQ HHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EHYHQLWQLGNQMLQMLPGTAKTILRDSIWQTQSRQAKQGLRVILDVAENARSLLDLPWE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LLVIPTAHQTLAAQGIEPLNEAEFSTRFLFLHHHMVLIRQVSSMLPYQPITIDRNLALQV EEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHH IAAPLVRSPIDTRSFIAELAPLFAGETLERWWSSDPNTIETLHKRLLEHQPQIVQLLCHG HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCC HSPKPEAKLQRHDMLVTYILNNQQVVYRVSSHDLWPILSASARLQLVVLTVCHSSGAQQT CCCCCHHHHHHHCEEEEEEECCCEEEEEECCCCCCHHHCCCCCEEEEEEEECCCCCCCCC EENTATVSNIAYDLVRAGVPMVIGMQGAIAQHAAARFCGVLYTALREGHTIEWAITAARA HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH ALSGNRWFIDWTIPVVYRQADQRERPAWHTRLADFLDARLLSPSYRRGFRAAVIVLALGL HHCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IIGGLSRAIFWPSQLRVNLELLRTGAFLWAIIGVTCTLLVDHFMTSWRPPHLAPHEIVAR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RYASRGGMLLGYAIGGWAGALLLGGLFLSIGELISPPIWQALFLGLVGWSSLWGYVVARS HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC ESRAAHNNWRLYPQLYVAKNGWLSVYLGMLLLLFIVPLGLLTAYGQSLVGLILSSGLGSA CCCCCCCCCEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AMGVTALTMIYSFDRERRAKLG HHHHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure MQYVDLVIKGYLNASNYFQMNVQMRGLVSDGGAVDNIPISLETITKLRERYQRLIKDFHH CCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SIYNHAKPEDPSMSRLLTQAAAVAVYHSADSIESLRALRSACGEFMTVWDTSIKPPALFQ HHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EHYHQLWQLGNQMLQMLPGTAKTILRDSIWQTQSRQAKQGLRVILDVAENARSLLDLPWE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LLVIPTAHQTLAAQGIEPLNEAEFSTRFLFLHHHMVLIRQVSSMLPYQPITIDRNLALQV EEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHH IAAPLVRSPIDTRSFIAELAPLFAGETLERWWSSDPNTIETLHKRLLEHQPQIVQLLCHG HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCC HSPKPEAKLQRHDMLVTYILNNQQVVYRVSSHDLWPILSASARLQLVVLTVCHSSGAQQT CCCCCHHHHHHHCEEEEEEECCCEEEEEECCCCCCHHHCCCCCEEEEEEEECCCCCCCCC EENTATVSNIAYDLVRAGVPMVIGMQGAIAQHAAARFCGVLYTALREGHTIEWAITAARA HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH ALSGNRWFIDWTIPVVYRQADQRERPAWHTRLADFLDARLLSPSYRRGFRAAVIVLALGL HHCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IIGGLSRAIFWPSQLRVNLELLRTGAFLWAIIGVTCTLLVDHFMTSWRPPHLAPHEIVAR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RYASRGGMLLGYAIGGWAGALLLGGLFLSIGELISPPIWQALFLGLVGWSSLWGYVVARS HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC ESRAAHNNWRLYPQLYVAKNGWLSVYLGMLLLLFIVPLGLLTAYGQSLVGLILSSGLGSA CCCCCCCCCEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AMGVTALTMIYSFDRERRAKLG HHHHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA