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The map label for this gene is 159898506

Identifier: 159898506

GI number: 159898506

Start: 2437078

End: 2437884

Strand: Direct

Name: 159898506

Synonym: Haur_1982

Alternate gene names: NA

Gene position: 2437078-2437884 (Clockwise)

Preceding gene: 159898503

Following gene: 159898507

Centisome position: 38.4

GC content: 48.33

Gene sequence:

>807_bases
ATGAGTGTTGATTCTGCGACGAACCCATTATTTAATCAAACTCTTGAAAGCTTAATCCGATTAAATAATCAATCTGGCAA
AGGTTTAAGTTTAGAGTCATTGCTTGAGCGAACCCATGATCTTGGGCACTATCTGACGGAATCCGAAACGATTCCCTCAA
ATAACGAAATTATCGCGTGGCATTGGGCAGATTATGCCGTTGTGCAGGCGCTGCGCGAGCCAACCGACCCTGCTCATAGC
GATACTTGGCAAACCACGATGCTTTTGATTCATAGCATCGTCAAGAAACAATCGCACATCTGGCAAGCTGATCCAAGTAA
TACATTTGAGGATGTTTGTTCGACCTGCCTCTTGACGGTCTGGGCTGCCCTTCCTTCCTTTCGCTATCATAGTAGCCTCC
AAACGTGGGCTATGACGGTTATCATAAACGCAATTCGAAAGCAGAACCGCCTAACACGGGCGACCAAGCGTGATCCAAAG
CAACGGGCTGAGCCAGGGCTTGAAGCCTTGCTGCATATTCCAGCCGCAGAGCAGACACAGCCCGAAGCAATTATCATGGC
CCAGGAATTTCTCGTGATTATCAACGAAGTTTTAGCGCATCCTGAGTATAAACTCGTGCGTGAGGTCTTTCTGTTAGCCG
TCATCCTCGATATGAAAGGCTCCGATATTGCTAAGCGCTTAGGGGTGGCCCAATCGACGGTATCGCAACGCTTAGCTGCC
GCCCGAGCGCTTTTGGCAAAGCACGAGCGCATTCGCAAATGGCTAGATAGCTTGTTTGATTCTGAGGATTCGGCTGAGAA
TGAATAA

Upstream 100 bases:

>100_bases
GCATGATTTGTGGGGATCAATTACAATGGTTGTGATTAACTGCTAGGTATAGCCATTTGATACTCATCACTGCTGGAATC
GATGCGAAGGAGAATCGCTA

Downstream 100 bases:

>100_bases
AATAGAGCGCCGTGGGAACTAAAGCAAGTATGAATAATATCGATAAAGCTTGGTCTTTACAGATGGCATTCAGGTTAAGT
ACTATCTATTTAGGTAGATT

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSVDSATNPLFNQTLESLIRLNNQSGKGLSLESLLERTHDLGHYLTESETIPSNNEIIAWHWADYAVVQALREPTDPAHS
DTWQTTMLLIHSIVKKQSHIWQADPSNTFEDVCSTCLLTVWAALPSFRYHSSLQTWAMTVIINAIRKQNRLTRATKRDPK
QRAEPGLEALLHIPAAEQTQPEAIIMAQEFLVIINEVLAHPEYKLVREVFLLAVILDMKGSDIAKRLGVAQSTVSQRLAA
ARALLAKHERIRKWLDSLFDSEDSAENE

Sequences:

>Translated_268_residues
MSVDSATNPLFNQTLESLIRLNNQSGKGLSLESLLERTHDLGHYLTESETIPSNNEIIAWHWADYAVVQALREPTDPAHS
DTWQTTMLLIHSIVKKQSHIWQADPSNTFEDVCSTCLLTVWAALPSFRYHSSLQTWAMTVIINAIRKQNRLTRATKRDPK
QRAEPGLEALLHIPAAEQTQPEAIIMAQEFLVIINEVLAHPEYKLVREVFLLAVILDMKGSDIAKRLGVAQSTVSQRLAA
ARALLAKHERIRKWLDSLFDSEDSAENE
>Mature_267_residues
SVDSATNPLFNQTLESLIRLNNQSGKGLSLESLLERTHDLGHYLTESETIPSNNEIIAWHWADYAVVQALREPTDPAHSD
TWQTTMLLIHSIVKKQSHIWQADPSNTFEDVCSTCLLTVWAALPSFRYHSSLQTWAMTVIINAIRKQNRLTRATKRDPKQ
RAEPGLEALLHIPAAEQTQPEAIIMAQEFLVIINEVLAHPEYKLVREVFLLAVILDMKGSDIAKRLGVAQSTVSQRLAAA
RALLAKHERIRKWLDSLFDSEDSAENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30267; Mature: 30136

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDSATNPLFNQTLESLIRLNNQSGKGLSLESLLERTHDLGHYLTESETIPSNNEIIAW
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
HWADYAVVQALREPTDPAHSDTWQTTMLLIHSIVKKQSHIWQADPSNTFEDVCSTCLLTV
ECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
WAALPSFRYHSSLQTWAMTVIINAIRKQNRLTRATKRDPKQRAEPGLEALLHIPAAEQTQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHCCCCCCCC
PEAIIMAQEFLVIINEVLAHPEYKLVREVFLLAVILDMKGSDIAKRLGVAQSTVSQRLAA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ARALLAKHERIRKWLDSLFDSEDSAENE
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVDSATNPLFNQTLESLIRLNNQSGKGLSLESLLERTHDLGHYLTESETIPSNNEIIAW
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
HWADYAVVQALREPTDPAHSDTWQTTMLLIHSIVKKQSHIWQADPSNTFEDVCSTCLLTV
ECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
WAALPSFRYHSSLQTWAMTVIINAIRKQNRLTRATKRDPKQRAEPGLEALLHIPAAEQTQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHCCCCCCCC
PEAIIMAQEFLVIINEVLAHPEYKLVREVFLLAVILDMKGSDIAKRLGVAQSTVSQRLAA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ARALLAKHERIRKWLDSLFDSEDSAENE
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA