Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898500

Identifier: 159898500

GI number: 159898500

Start: 2431247

End: 2433130

Strand: Direct

Name: 159898500

Synonym: Haur_1976

Alternate gene names: NA

Gene position: 2431247-2433130 (Clockwise)

Preceding gene: 159898499

Following gene: 159898503

Centisome position: 38.31

GC content: 50.58

Gene sequence:

>1884_bases
ATGGCAGACCCAATAGAAGTACCCAACGACAAACTGCAATTTAGCCAATTTCATCAGCCCAGCCTCAAAACTGGTTTGTA
TCAGATTGTCGTAACCCATCAAATTTCGACCAACGAGCCAGCACAACCCAAGATTCCGCAGACAGAATTTAGCGCGACGC
GCAAATTTTATGTTGCTGGCGAACGATTTAGCCTTGATCCCAAGGATATTTATGCAGTCTACCCACCTGACGGTAGCCTA
AGCGACCATTCGACGATTTTGCCGCACCTGATTTTGAACCGCTCGACCTTGCCTTGGGAGCGTCAAGCTGACCCTAATAA
TGAAGATTTGCCGTGGCTGAGCTTATTGATGTTTACCGCCGATCAAACTCCGCTTGCCCAAACCATGACCTTGGGTGAGT
TGCAGCAATCAGCTAGCGTTGGCGTGAAATTTCCCAGCTTCGATTTAGAGCCGGGCCAAACGAGCGATGATCGAGTGGTG
GTGATTGACGTTGCCAAACAGTTGTTAGCGCGTTTGTTACCAAGCAATACCGATTTAGCCTATCAAGCCCATATTCGCCA
AGCGATTGCCAACGATGGCACACCAACCGGACAGGAGCGAGCGGTGATTTTGGGTAATCGCCTGCCCGGCCCGAATCAGA
TTAATACGGTGTTTTTGGTTTCGTTGGAAAACCGCTATACCAGTGCTGGCTTCGATTTTCAACAAGCCAGCGATTCAGAT
TTGATTCGCTTGGTGGTGCTGAGCAGTTGGCGTTTTGCGTCGCCACCAGCCGCCCAACAGCAATTTGCTGATCTCATGCT
TGGCTTGAATTATAGCCCCAGTAATCTCCGGCTAGCCACCAATGCCAACCCTTTGGCTGAACACTATGCGGCCCAAGGCT
ATGCATTACTGCCTCACAACATGCGCCAAGCCAACCAATCGATCTCGTGGTATCGTGGGCCGTTGGGAGTTGGCCAACAT
ACTGCCCAATTGCCTTTGCCGGCCTTAGCCGCCGATAGTTTACTGGCCTATGATTCAACCACGGGCATGTTTGATGTTTC
GTATGCAGCGGCATGGGAATTAGGGCGCTTGATGATGTTGCAGACCAAGCAAATTTCAACCAGTTTGTATGCTTGGAAGC
GTGGGCAAATTCAACAGAAAAAGAGCCAAAACACCCCAACTGCCCGCTTCCAACCGCAACGTTTACAAAGCCGCAGTCTG
GCAAGCGCTGCTCCCGCCGATGTTCAAGCGTGGTTTAAAGGGCTAGCCCAATTGCAAGGCGTGCCATTCAACTACCTTGT
GCCCGATGAAACGATGCTGCCAAATGAAGCAATTCGCTTCTTCCAGCTTGATCCAGCTTGGATGGCTTGTTTATGTGATG
GAGCGCTAAGCATTGGCCGCGCGACCACGGGCGATTTGACCCATGAGCAAGCGCTTGATCTACCGACGTTGCTCGGTGGA
CTGCCTACCGTAACTGGCTTTATCATGCGCTCGGCAGTTGTGGCAGGCTGGCCCAATATTATTATCGAAGCGAGCGATGC
TGCTGGCGGGAACATTGATCAGATTCGGCTGGAAAAATTGGCTGATAGCGTTTTGATTGGCTTGTTTGCTGGCGAGGTGG
CGCGTTTTAGCTTCAAGCTGCACGCCGAAACCCTGCACTTTGGCTTTGATCCGGCTAATCAACAATACCCTACGCTGCAT
AAACAATTGCGTGATAGCAATGGCGTTGAAACTGATCAAGTGATTGCAACTATTCCCTGGCAAGATGAGGCTTATTCGGT
GGTGGGTTTAGCTCAACTCGCTAGTTCAATGCAACAAATTGTGCCACAAGCCTCCTTTACATCGGCCCAATTTGCCCTGC
AAATGATCGAAGGCAGTGCAAGCGTTTGCTTTGAACAGGCTTGA

Upstream 100 bases:

>100_bases
CGCTTAACCTGCAATCGAGCTTGGCACAAAGTTATGTGATTGCGCCGCAAGTTGGCAGTTATGCTGATGAGCACTAAATT
GTGATACTGAGGATGAATGT

Downstream 100 bases:

>100_bases
TTAGGTGGTTAATCTTGAACGAGGTGAATGCTGCTACTCACCTCGTTCGCGAGCCGATTGGTGCAGATAATTGGCATACA
TTGCCTCAACCACCCGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MADPIEVPNDKLQFSQFHQPSLKTGLYQIVVTHQISTNEPAQPKIPQTEFSATRKFYVAGERFSLDPKDIYAVYPPDGSL
SDHSTILPHLILNRSTLPWERQADPNNEDLPWLSLLMFTADQTPLAQTMTLGELQQSASVGVKFPSFDLEPGQTSDDRVV
VIDVAKQLLARLLPSNTDLAYQAHIRQAIANDGTPTGQERAVILGNRLPGPNQINTVFLVSLENRYTSAGFDFQQASDSD
LIRLVVLSSWRFASPPAAQQQFADLMLGLNYSPSNLRLATNANPLAEHYAAQGYALLPHNMRQANQSISWYRGPLGVGQH
TAQLPLPALAADSLLAYDSTTGMFDVSYAAAWELGRLMMLQTKQISTSLYAWKRGQIQQKKSQNTPTARFQPQRLQSRSL
ASAAPADVQAWFKGLAQLQGVPFNYLVPDETMLPNEAIRFFQLDPAWMACLCDGALSIGRATTGDLTHEQALDLPTLLGG
LPTVTGFIMRSAVVAGWPNIIIEASDAAGGNIDQIRLEKLADSVLIGLFAGEVARFSFKLHAETLHFGFDPANQQYPTLH
KQLRDSNGVETDQVIATIPWQDEAYSVVGLAQLASSMQQIVPQASFTSAQFALQMIEGSASVCFEQA

Sequences:

>Translated_627_residues
MADPIEVPNDKLQFSQFHQPSLKTGLYQIVVTHQISTNEPAQPKIPQTEFSATRKFYVAGERFSLDPKDIYAVYPPDGSL
SDHSTILPHLILNRSTLPWERQADPNNEDLPWLSLLMFTADQTPLAQTMTLGELQQSASVGVKFPSFDLEPGQTSDDRVV
VIDVAKQLLARLLPSNTDLAYQAHIRQAIANDGTPTGQERAVILGNRLPGPNQINTVFLVSLENRYTSAGFDFQQASDSD
LIRLVVLSSWRFASPPAAQQQFADLMLGLNYSPSNLRLATNANPLAEHYAAQGYALLPHNMRQANQSISWYRGPLGVGQH
TAQLPLPALAADSLLAYDSTTGMFDVSYAAAWELGRLMMLQTKQISTSLYAWKRGQIQQKKSQNTPTARFQPQRLQSRSL
ASAAPADVQAWFKGLAQLQGVPFNYLVPDETMLPNEAIRFFQLDPAWMACLCDGALSIGRATTGDLTHEQALDLPTLLGG
LPTVTGFIMRSAVVAGWPNIIIEASDAAGGNIDQIRLEKLADSVLIGLFAGEVARFSFKLHAETLHFGFDPANQQYPTLH
KQLRDSNGVETDQVIATIPWQDEAYSVVGLAQLASSMQQIVPQASFTSAQFALQMIEGSASVCFEQA
>Mature_626_residues
ADPIEVPNDKLQFSQFHQPSLKTGLYQIVVTHQISTNEPAQPKIPQTEFSATRKFYVAGERFSLDPKDIYAVYPPDGSLS
DHSTILPHLILNRSTLPWERQADPNNEDLPWLSLLMFTADQTPLAQTMTLGELQQSASVGVKFPSFDLEPGQTSDDRVVV
IDVAKQLLARLLPSNTDLAYQAHIRQAIANDGTPTGQERAVILGNRLPGPNQINTVFLVSLENRYTSAGFDFQQASDSDL
IRLVVLSSWRFASPPAAQQQFADLMLGLNYSPSNLRLATNANPLAEHYAAQGYALLPHNMRQANQSISWYRGPLGVGQHT
AQLPLPALAADSLLAYDSTTGMFDVSYAAAWELGRLMMLQTKQISTSLYAWKRGQIQQKKSQNTPTARFQPQRLQSRSLA
SAAPADVQAWFKGLAQLQGVPFNYLVPDETMLPNEAIRFFQLDPAWMACLCDGALSIGRATTGDLTHEQALDLPTLLGGL
PTVTGFIMRSAVVAGWPNIIIEASDAAGGNIDQIRLEKLADSVLIGLFAGEVARFSFKLHAETLHFGFDPANQQYPTLHK
QLRDSNGVETDQVIATIPWQDEAYSVVGLAQLASSMQQIVPQASFTSAQFALQMIEGSASVCFEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68784; Mature: 68652

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPIEVPNDKLQFSQFHQPSLKTGLYQIVVTHQISTNEPAQPKIPQTEFSATRKFYVAG
CCCCCCCCCCCHHHHHCCCCHHHHCEEEEEEEEEECCCCCCCCCCCCCHHHCCEEEEEEC
ERFSLDPKDIYAVYPPDGSLSDHSTILPHLILNRSTLPWERQADPNNEDLPWLSLLMFTA
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC
DQTPLAQTMTLGELQQSASVGVKFPSFDLEPGQTSDDRVVVIDVAKQLLARLLPSNTDLA
CCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHH
YQAHIRQAIANDGTPTGQERAVILGNRLPGPNQINTVFLVSLENRYTSAGFDFQQASDSD
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
LIRLVVLSSWRFASPPAAQQQFADLMLGLNYSPSNLRLATNANPLAEHYAAQGYALLPHN
EEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCEEECCCH
MRQANQSISWYRGPLGVGQHTAQLPLPALAADSLLAYDSTTGMFDVSYAAAWELGRLMML
HHHHHCCCCEECCCCCCCCCCCCCCCCHHHHCCEEEECCCCCEEEEHHHHHHHHHHEEEE
QTKQISTSLYAWKRGQIQQKKSQNTPTARFQPQRLQSRSLASAAPADVQAWFKGLAQLQG
EHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
VPFNYLVPDETMLPNEAIRFFQLDPAWMACLCDGALSIGRATTGDLTHEQALDLPTLLGG
CCCEEECCCCCCCCCHHEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHCC
LPTVTGFIMRSAVVAGWPNIIIEASDAAGGNIDQIRLEKLADSVLIGLFAGEVARFSFKL
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
HAETLHFGFDPANQQYPTLHKQLRDSNGVETDQVIATIPWQDEAYSVVGLAQLASSMQQI
EEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
VPQASFTSAQFALQMIEGSASVCFEQA
CCCCCCCHHHHHHHHHCCCHHHHEECC
>Mature Secondary Structure 
ADPIEVPNDKLQFSQFHQPSLKTGLYQIVVTHQISTNEPAQPKIPQTEFSATRKFYVAG
CCCCCCCCCCHHHHHCCCCHHHHCEEEEEEEEEECCCCCCCCCCCCCHHHCCEEEEEEC
ERFSLDPKDIYAVYPPDGSLSDHSTILPHLILNRSTLPWERQADPNNEDLPWLSLLMFTA
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC
DQTPLAQTMTLGELQQSASVGVKFPSFDLEPGQTSDDRVVVIDVAKQLLARLLPSNTDLA
CCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHH
YQAHIRQAIANDGTPTGQERAVILGNRLPGPNQINTVFLVSLENRYTSAGFDFQQASDSD
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
LIRLVVLSSWRFASPPAAQQQFADLMLGLNYSPSNLRLATNANPLAEHYAAQGYALLPHN
EEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCEEECCCH
MRQANQSISWYRGPLGVGQHTAQLPLPALAADSLLAYDSTTGMFDVSYAAAWELGRLMML
HHHHHCCCCEECCCCCCCCCCCCCCCCHHHHCCEEEECCCCCEEEEHHHHHHHHHHEEEE
QTKQISTSLYAWKRGQIQQKKSQNTPTARFQPQRLQSRSLASAAPADVQAWFKGLAQLQG
EHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
VPFNYLVPDETMLPNEAIRFFQLDPAWMACLCDGALSIGRATTGDLTHEQALDLPTLLGG
CCCEEECCCCCCCCCHHEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHCC
LPTVTGFIMRSAVVAGWPNIIIEASDAAGGNIDQIRLEKLADSVLIGLFAGEVARFSFKL
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
HAETLHFGFDPANQQYPTLHKQLRDSNGVETDQVIATIPWQDEAYSVVGLAQLASSMQQI
EEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
VPQASFTSAQFALQMIEGSASVCFEQA
CCCCCCCHHHHHHHHHCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA