Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898471

Identifier: 159898471

GI number: 159898471

Start: 2360895

End: 2361125

Strand: Reverse

Name: 159898471

Synonym: Haur_1947

Alternate gene names: NA

Gene position: 2361125-2360895 (Counterclockwise)

Preceding gene: 159898474

Following gene: 159898469

Centisome position: 37.2

GC content: 48.48

Gene sequence:

>231_bases
ATGGATTGGCAAGCACTTTCAGATCGGGCATTGATCGCCGAGATTGATCATGCCTTACGTCATCGTGCCCACGCCGCACT
CAAGCTCTGGCAACTTATTGCCCCGCAGATCGACCCAGCACAACAAGCCTATGGCGATTTGCTGCAACGCTATTTAGAGC
AAAATATAGAATTGGCCGAGGCAATCCATCAGTGGCTTTTGGTACAGATAGCTAAGCAAATTGCTGATTAA

Upstream 100 bases:

>100_bases
ACAATCCTTTAACCGCTTGGTGCTTAATCATACATAGCTAGCTTGATCTCTTATAATCAGGCCATAAAATCGCTAATTTT
AGTGAAGATAGGAGGTTTGA

Downstream 100 bases:

>100_bases
TCGGTTGGCGCAGCAGTATTACTCATGCCCAAAGCTTTGGTTGCGATCGCTTGAAGCAGCTCGCGTAATGCAGCAGGTTG
TAGCACCACCACTGGAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MDWQALSDRALIAEIDHALRHRAHAALKLWQLIAPQIDPAQQAYGDLLQRYLEQNIELAEAIHQWLLVQIAKQIAD

Sequences:

>Translated_76_residues
MDWQALSDRALIAEIDHALRHRAHAALKLWQLIAPQIDPAQQAYGDLLQRYLEQNIELAEAIHQWLLVQIAKQIAD
>Mature_76_residues
MDWQALSDRALIAEIDHALRHRAHAALKLWQLIAPQIDPAQQAYGDLLQRYLEQNIELAEAIHQWLLVQIAKQIAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8762; Mature: 8762

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWQALSDRALIAEIDHALRHRAHAALKLWQLIAPQIDPAQQAYGDLLQRYLEQNIELAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
AIHQWLLVQIAKQIAD
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWQALSDRALIAEIDHALRHRAHAALKLWQLIAPQIDPAQQAYGDLLQRYLEQNIELAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
AIHQWLLVQIAKQIAD
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA