Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898466

Identifier: 159898466

GI number: 159898466

Start: 2353809

End: 2355551

Strand: Reverse

Name: 159898466

Synonym: Haur_1942

Alternate gene names: NA

Gene position: 2355551-2353809 (Counterclockwise)

Preceding gene: 159898467

Following gene: 159898462

Centisome position: 37.12

GC content: 52.09

Gene sequence:

>1743_bases
ATGCAATTTGTTATTCAACAATCGAAACTAAACGTAAAAACTAGCTCGTTATTCGTCTTTGGTTTGGCGTTATTGCTCTA
TACCATAACCCTCTTACCAGGGCTTGGCGGTGGTGATACCGCCGAATTTCAGCGCGTTGGCCCAACCCTTGAGGTCGCCC
ATAGCACAGGCTACCCGCTTTATAGCATCCTAACGTGGCTTTGGAGCAAGCTTATTCCACTTGGGAGTATTGCTTGGCGG
GTTAATCTCTTTTCGGCGTTCGTTGCCGCCCTCAGTTTAAGCAGCTTCAACCAACTTGCCCAAACGAGCGGCCTTGCCCA
ACGTTGGGCCTTGGCTGGCACTGCCATGCTTGGGCTATCGTCAAGCTTTTGGCAACAGGCTACTCAAGCCGAAATTTATG
CGTTTGCGGTGCTTTTGCAGGTCAGCACGCTTGGGCTGATCGTCGCTTGGTGGCAACAACGCATACCGTTTTGGCTGCTT
GGGCTAGCGGCAGGCCTGATGCTTGGGCATCATCGCAGCAGCGTGTTTATTCTGCCATGGATGCTGATTGCCTGTTGTTG
GCAGCAACGCCCAAGTGTACGGCAGTGGCTGTTGGCGGTTGGGGCTGGCTGTTTAAGCTTTCTGCCCTATTTGTATATCG
TTTGGCGTGCCCCAGCTTGGCAAAATGGTTGGGCATTGCTTACTGATTATCTGCTTGGCAGTGCTGGCGGGGCATGGTTT
GATCCTCAACGAGCGCTCGATCAAGGCTGGCAACGGCTCTTCGAGGTGCAAATCCAGCTGTTTGGGCCACAATTAACCTG
GCTGGGCTTGGGCTTAGCTGGGATTGGCTGGTGGCAGTGTTGGCAAAAACAACGGCCACTCGCAATAATGCTTGGTGGTA
GCTATTGCAGCATTTTGGGCTTTTGTTTGGTCTATTTCGTTGACGATCTGGCGGTGTTTGGGCTGGGAGCCTATGTTGCC
CAAGCCTTGTTGATTGGCTTTGGGTTGGCCGCGTTGCCATGGCCACGCTGGGGGCTGGGCTTGGCCTGCGGCATCAGTCT
GTGGTTGGCTTGGCAGACATGGCCACAAATTCACCAATCCAATACCGCCCAACCTGAACAACTTGCCAGACAACGCTTGG
CCGAACCACTCGCTGCCAATAGCCTCGTGATTGGTGATGGTTGGAGCATTGAGAGTTTGCGCTATCTGCAAACCGTTGAG
CAGCTACGGCCAGATCTCGAATTTAGCTTTCAAGCCGAGCAGCAACGGATTCGCGATCAATTAGCCCAAGGTCGCCAGAT
CTATGCCTTGCAGGCGATCCCTGAATTGGGCTTGCAGCATCGTAAAGTTGGCGATTGGTGGCAGATCGAGAATATTCCTC
AGCAGTTTAAGCAACAAGTCGCTATTGTGTGGCAGAATGGTATTCAATTAACTGGATTTGATTTACCGGCTCAAGCTCAA
GATCAGCTGTTAATTGGGCTACGTTGGCAAACCAGCCAGCAATTACCGAGCTTAATTCGCTTCATTCATGTGCTTGATCA
AACTGGCCAGTTGGTTGCGCAAACTGATAGCCCAACCAATCCTAGCAGCGAATTTTGGCCCCTAGCCCAAGCCCAAACCG
ACCTATTGGCGGTCAATTTGCCGCAGTATTTGCCAGCAGGCAACTATAGCGTCATTGTCGGCTGGTACGATTTGGGTGGG
CAGCGGATTGCGCTCACTCCTCAGCAAAATACCTATCTGCTTGGCATGGTTATGCTCGATTGA

Upstream 100 bases:

>100_bases
AGGCTACAATTTGCAATTAATTGCAGGCTAACCCTACGCCCGCTTGACAGCGAAGCAGGCCAACCTGATAATCCTAGCCG
AGAAGCATGCTAGATAAATT

Downstream 100 bases:

>100_bases
GGTTCGTGCACTCCTAGCCTCGTGTTTTCAAGAATTAGTTACAAACCTGTGTTGTGTTATCACCACCCTTCCGTCCCGCC
TCAAGGCGGGAGACGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPLYSILTWLWSKLIPLGSIAWR
VNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLSSSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLL
GLAAGLMLGHHRSSVFILPWMLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF
DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILGFCLVYFVDDLAVFGLGAYVA
QALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQSNTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVE
QLRPDLEFSFQAEQQRIRDQLAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ
DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNLPQYLPAGNYSVIVGWYDLGG
QRIALTPQQNTYLLGMVMLD

Sequences:

>Translated_580_residues
MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPLYSILTWLWSKLIPLGSIAWR
VNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLSSSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLL
GLAAGLMLGHHRSSVFILPWMLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF
DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILGFCLVYFVDDLAVFGLGAYVA
QALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQSNTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVE
QLRPDLEFSFQAEQQRIRDQLAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ
DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNLPQYLPAGNYSVIVGWYDLGG
QRIALTPQQNTYLLGMVMLD
>Mature_580_residues
MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPLYSILTWLWSKLIPLGSIAWR
VNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLSSSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLL
GLAAGLMLGHHRSSVFILPWMLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF
DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILGFCLVYFVDDLAVFGLGAYVA
QALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQSNTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVE
QLRPDLEFSFQAEQQRIRDQLAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ
DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNLPQYLPAGNYSVIVGWYDLGG
QRIALTPQQNTYLLGMVMLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64854; Mature: 64854

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPL
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCCH
YSILTWLWSKLIPLGSIAWRVNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLLGLAAGLMLGHHRSSVFILPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHH
MLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILG
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
FCLVYFVDDLAVFGLGAYVAQALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
NTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVEQLRPDLEFSFQAEQQRIRDQ
CCCCHHHHHHHHHHCCHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ
HHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCC
DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNL
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEC
PQYLPAGNYSVIVGWYDLGGQRIALTPQQNTYLLGMVMLD
HHHCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPL
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCCH
YSILTWLWSKLIPLGSIAWRVNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLLGLAAGLMLGHHRSSVFILPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHH
MLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILG
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
FCLVYFVDDLAVFGLGAYVAQALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
NTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVEQLRPDLEFSFQAEQQRIRDQ
CCCCHHHHHHHHHHCCHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ
HHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCC
DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNL
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEC
PQYLPAGNYSVIVGWYDLGGQRIALTPQQNTYLLGMVMLD
HHHCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA