| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898466
Identifier: 159898466
GI number: 159898466
Start: 2353809
End: 2355551
Strand: Reverse
Name: 159898466
Synonym: Haur_1942
Alternate gene names: NA
Gene position: 2355551-2353809 (Counterclockwise)
Preceding gene: 159898467
Following gene: 159898462
Centisome position: 37.12
GC content: 52.09
Gene sequence:
>1743_bases ATGCAATTTGTTATTCAACAATCGAAACTAAACGTAAAAACTAGCTCGTTATTCGTCTTTGGTTTGGCGTTATTGCTCTA TACCATAACCCTCTTACCAGGGCTTGGCGGTGGTGATACCGCCGAATTTCAGCGCGTTGGCCCAACCCTTGAGGTCGCCC ATAGCACAGGCTACCCGCTTTATAGCATCCTAACGTGGCTTTGGAGCAAGCTTATTCCACTTGGGAGTATTGCTTGGCGG GTTAATCTCTTTTCGGCGTTCGTTGCCGCCCTCAGTTTAAGCAGCTTCAACCAACTTGCCCAAACGAGCGGCCTTGCCCA ACGTTGGGCCTTGGCTGGCACTGCCATGCTTGGGCTATCGTCAAGCTTTTGGCAACAGGCTACTCAAGCCGAAATTTATG CGTTTGCGGTGCTTTTGCAGGTCAGCACGCTTGGGCTGATCGTCGCTTGGTGGCAACAACGCATACCGTTTTGGCTGCTT GGGCTAGCGGCAGGCCTGATGCTTGGGCATCATCGCAGCAGCGTGTTTATTCTGCCATGGATGCTGATTGCCTGTTGTTG GCAGCAACGCCCAAGTGTACGGCAGTGGCTGTTGGCGGTTGGGGCTGGCTGTTTAAGCTTTCTGCCCTATTTGTATATCG TTTGGCGTGCCCCAGCTTGGCAAAATGGTTGGGCATTGCTTACTGATTATCTGCTTGGCAGTGCTGGCGGGGCATGGTTT GATCCTCAACGAGCGCTCGATCAAGGCTGGCAACGGCTCTTCGAGGTGCAAATCCAGCTGTTTGGGCCACAATTAACCTG GCTGGGCTTGGGCTTAGCTGGGATTGGCTGGTGGCAGTGTTGGCAAAAACAACGGCCACTCGCAATAATGCTTGGTGGTA GCTATTGCAGCATTTTGGGCTTTTGTTTGGTCTATTTCGTTGACGATCTGGCGGTGTTTGGGCTGGGAGCCTATGTTGCC CAAGCCTTGTTGATTGGCTTTGGGTTGGCCGCGTTGCCATGGCCACGCTGGGGGCTGGGCTTGGCCTGCGGCATCAGTCT GTGGTTGGCTTGGCAGACATGGCCACAAATTCACCAATCCAATACCGCCCAACCTGAACAACTTGCCAGACAACGCTTGG CCGAACCACTCGCTGCCAATAGCCTCGTGATTGGTGATGGTTGGAGCATTGAGAGTTTGCGCTATCTGCAAACCGTTGAG CAGCTACGGCCAGATCTCGAATTTAGCTTTCAAGCCGAGCAGCAACGGATTCGCGATCAATTAGCCCAAGGTCGCCAGAT CTATGCCTTGCAGGCGATCCCTGAATTGGGCTTGCAGCATCGTAAAGTTGGCGATTGGTGGCAGATCGAGAATATTCCTC AGCAGTTTAAGCAACAAGTCGCTATTGTGTGGCAGAATGGTATTCAATTAACTGGATTTGATTTACCGGCTCAAGCTCAA GATCAGCTGTTAATTGGGCTACGTTGGCAAACCAGCCAGCAATTACCGAGCTTAATTCGCTTCATTCATGTGCTTGATCA AACTGGCCAGTTGGTTGCGCAAACTGATAGCCCAACCAATCCTAGCAGCGAATTTTGGCCCCTAGCCCAAGCCCAAACCG ACCTATTGGCGGTCAATTTGCCGCAGTATTTGCCAGCAGGCAACTATAGCGTCATTGTCGGCTGGTACGATTTGGGTGGG CAGCGGATTGCGCTCACTCCTCAGCAAAATACCTATCTGCTTGGCATGGTTATGCTCGATTGA
Upstream 100 bases:
>100_bases AGGCTACAATTTGCAATTAATTGCAGGCTAACCCTACGCCCGCTTGACAGCGAAGCAGGCCAACCTGATAATCCTAGCCG AGAAGCATGCTAGATAAATT
Downstream 100 bases:
>100_bases GGTTCGTGCACTCCTAGCCTCGTGTTTTCAAGAATTAGTTACAAACCTGTGTTGTGTTATCACCACCCTTCCGTCCCGCC TCAAGGCGGGAGACGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPLYSILTWLWSKLIPLGSIAWR VNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLSSSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLL GLAAGLMLGHHRSSVFILPWMLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILGFCLVYFVDDLAVFGLGAYVA QALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQSNTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVE QLRPDLEFSFQAEQQRIRDQLAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNLPQYLPAGNYSVIVGWYDLGG QRIALTPQQNTYLLGMVMLD
Sequences:
>Translated_580_residues MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPLYSILTWLWSKLIPLGSIAWR VNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLSSSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLL GLAAGLMLGHHRSSVFILPWMLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILGFCLVYFVDDLAVFGLGAYVA QALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQSNTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVE QLRPDLEFSFQAEQQRIRDQLAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNLPQYLPAGNYSVIVGWYDLGG QRIALTPQQNTYLLGMVMLD >Mature_580_residues MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPLYSILTWLWSKLIPLGSIAWR VNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLSSSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLL GLAAGLMLGHHRSSVFILPWMLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILGFCLVYFVDDLAVFGLGAYVA QALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQSNTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVE QLRPDLEFSFQAEQQRIRDQLAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNLPQYLPAGNYSVIVGWYDLGG QRIALTPQQNTYLLGMVMLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64854; Mature: 64854
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCCH YSILTWLWSKLIPLGSIAWRVNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLLGLAAGLMLGHHRSSVFILPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHH MLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILG CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH FCLVYFVDDLAVFGLGAYVAQALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC NTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVEQLRPDLEFSFQAEQQRIRDQ CCCCHHHHHHHHHHCCHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ HHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCC DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNL CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEC PQYLPAGNYSVIVGWYDLGGQRIALTPQQNTYLLGMVMLD HHHCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEEEEEC >Mature Secondary Structure MQFVIQQSKLNVKTSSLFVFGLALLLYTITLLPGLGGGDTAEFQRVGPTLEVAHSTGYPL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCCH YSILTWLWSKLIPLGSIAWRVNLFSAFVAALSLSSFNQLAQTSGLAQRWALAGTAMLGLS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSFWQQATQAEIYAFAVLLQVSTLGLIVAWWQQRIPFWLLGLAAGLMLGHHRSSVFILPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHH MLIACCWQQRPSVRQWLLAVGAGCLSFLPYLYIVWRAPAWQNGWALLTDYLLGSAGGAWF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC DPQRALDQGWQRLFEVQIQLFGPQLTWLGLGLAGIGWWQCWQKQRPLAIMLGGSYCSILG CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH FCLVYFVDDLAVFGLGAYVAQALLIGFGLAALPWPRWGLGLACGISLWLAWQTWPQIHQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC NTAQPEQLARQRLAEPLAANSLVIGDGWSIESLRYLQTVEQLRPDLEFSFQAEQQRIRDQ CCCCHHHHHHHHHHCCHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAQGRQIYALQAIPELGLQHRKVGDWWQIENIPQQFKQQVAIVWQNGIQLTGFDLPAQAQ HHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCCC DQLLIGLRWQTSQQLPSLIRFIHVLDQTGQLVAQTDSPTNPSSEFWPLAQAQTDLLAVNL CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHCCCCEEEEEC PQYLPAGNYSVIVGWYDLGGQRIALTPQQNTYLLGMVMLD HHHCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA