| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898464
Identifier: 159898464
GI number: 159898464
Start: 2352345
End: 2353091
Strand: Direct
Name: 159898464
Synonym: Haur_1940
Alternate gene names: NA
Gene position: 2352345-2353091 (Clockwise)
Preceding gene: 159898463
Following gene: 159898465
Centisome position: 37.06
GC content: 50.33
Gene sequence:
>747_bases ATGACGCATAATCTAACGAACGAACACCTGCCCGTTGATGATCAACCAACTAGCCAAGCAATCGCCAAACTATTACGTGA CTTTGGTGCGCATCCCAGTCAAGAATTTCATGCCCGCCAGGCCAATGCTCCGTGGTTACAAGCGACCGCACCGCAGCGGC GAGTCAACTGGTACTGGCGTGGCATGCTGATGGCTGGGCTTATGCTGTTGCTTTGGTTTACCCTGCCAAGCGGCTTTGTG GCTGCCCTTGATGAATTTTTTGGCTTGTATCGTGCCCCATCGGATACAGTTGAAGCGCCACAAGGGACAATTCTGCCAGA AGCACCCGCCATCGCAACGCTTGAAGAAGCCTCGGCGTTAGTTGGGTTTGATATTCTCACGCCGTCGCCACTTCCGGAAA TAGTCCAACAATCAAAGATTACCGTGACGGGCGAGCAACCAGACAACATGTTTGCGAGGATTGATTATCGCGATGCATAT GGCTATAGTTACCTTTCGTTGACTGCCAAACGTGGGCCTCTCTACCTTCAGATTGGCGCGACCGCCAATGTTGAGATTGT GCAAGTTGGTAATGTGAGTGGTGAATATGTGCAGGGTGGCTTTATTGTGAGGGGAAATGTCTCGGAATGGGATTCGTCAT ATGCGAACAAAACCTTGCGTTGGCAAATTGGCGATATCTCCTATTCACTTTCATCGGTGCATCTTAGCAAGCAAGCACTG ATTGATCTCGCAGCGGGAATGCAATAA
Upstream 100 bases:
>100_bases CAACACCTTGGTTGTTCCGAAAACGCCGTATCAGTGAGCATCCACCGTGCCTTGCGAATTCTGCAAACCCAGTATGCAAC TTTAGCTGAGGAGCTTTTCA
Downstream 100 bases:
>100_bases ATCGCATGGTTGCTGCTCTGCATCGCCGCTTGGTTGTGCTGAGCAGCATTTGCATGGTCAGCCTCAATTGCAGTATGATC AAACGGGGAATGATCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTHNLTNEHLPVDDQPTSQAIAKLLRDFGAHPSQEFHARQANAPWLQATAPQRRVNWYWRGMLMAGLMLLLWFTLPSGFV AALDEFFGLYRAPSDTVEAPQGTILPEAPAIATLEEASALVGFDILTPSPLPEIVQQSKITVTGEQPDNMFARIDYRDAY GYSYLSLTAKRGPLYLQIGATANVEIVQVGNVSGEYVQGGFIVRGNVSEWDSSYANKTLRWQIGDISYSLSSVHLSKQAL IDLAAGMQ
Sequences:
>Translated_248_residues MTHNLTNEHLPVDDQPTSQAIAKLLRDFGAHPSQEFHARQANAPWLQATAPQRRVNWYWRGMLMAGLMLLLWFTLPSGFV AALDEFFGLYRAPSDTVEAPQGTILPEAPAIATLEEASALVGFDILTPSPLPEIVQQSKITVTGEQPDNMFARIDYRDAY GYSYLSLTAKRGPLYLQIGATANVEIVQVGNVSGEYVQGGFIVRGNVSEWDSSYANKTLRWQIGDISYSLSSVHLSKQAL IDLAAGMQ >Mature_247_residues THNLTNEHLPVDDQPTSQAIAKLLRDFGAHPSQEFHARQANAPWLQATAPQRRVNWYWRGMLMAGLMLLLWFTLPSGFVA ALDEFFGLYRAPSDTVEAPQGTILPEAPAIATLEEASALVGFDILTPSPLPEIVQQSKITVTGEQPDNMFARIDYRDAYG YSYLSLTAKRGPLYLQIGATANVEIVQVGNVSGEYVQGGFIVRGNVSEWDSSYANKTLRWQIGDISYSLSSVHLSKQALI DLAAGMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27330; Mature: 27199
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHNLTNEHLPVDDQPTSQAIAKLLRDFGAHPSQEFHARQANAPWLQATAPQRRVNWYWR CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHH GMLMAGLMLLLWFTLPSGFVAALDEFFGLYRAPSDTVEAPQGTILPEAPAIATLEEASAL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VGFDILTPSPLPEIVQQSKITVTGEQPDNMFARIDYRDAYGYSYLSLTAKRGPLYLQIGA EEEECCCCCCCHHHHHCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECC TANVEIVQVGNVSGEYVQGGFIVRGNVSEWDSSYANKTLRWQIGDISYSLSSVHLSKQAL CCCEEEEEECCCCCCEEECCEEEECCCHHHHHHHCCCEEEEEECCEEEEHHHHHHHHHHH IDLAAGMQ HHHHCCCC >Mature Secondary Structure THNLTNEHLPVDDQPTSQAIAKLLRDFGAHPSQEFHARQANAPWLQATAPQRRVNWYWR CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHH GMLMAGLMLLLWFTLPSGFVAALDEFFGLYRAPSDTVEAPQGTILPEAPAIATLEEASAL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VGFDILTPSPLPEIVQQSKITVTGEQPDNMFARIDYRDAYGYSYLSLTAKRGPLYLQIGA EEEECCCCCCCHHHHHCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECC TANVEIVQVGNVSGEYVQGGFIVRGNVSEWDSSYANKTLRWQIGDISYSLSSVHLSKQAL CCCEEEEEECCCCCCEEECCEEEECCCHHHHHHHCCCEEEEEECCEEEEHHHHHHHHHHH IDLAAGMQ HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA