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The map label for this gene is oppC [H]

Identifier: 159898423

GI number: 159898423

Start: 2291945

End: 2292838

Strand: Direct

Name: oppC [H]

Synonym: Haur_1899

Alternate gene names: 159898423

Gene position: 2291945-2292838 (Clockwise)

Preceding gene: 159898422

Following gene: 159898424

Centisome position: 36.11

GC content: 50.78

Gene sequence:

>894_bases
ATGGCAGTTAATCAGCTTTCACAACCCACAGCCCAAGAGGAGCTTCCGGTAGCGGAATCGCTGCTCAAGGTGTTTTGGCG
GCGCTATCGCCGCAATGCTATGGCTTTGGTTGGCTTAGTTTTAGTCATTATCTTTGTCATCCTAGCCATTTTTGCCCCTT
GGATTGCCCCATACCACTATAACGATCAGAATCTGGCTGCAACGTGGCAAAAGCCTTCCAGTACCTATTGGTTTGGAACT
GATGATGTTGGCCGTGATCAATTGAGCCGGATTATTTATGCGGTGCGCACTGCGGCAATTGTTGGCTTGGGCACATCGAT
TCTATCCTTAATAATCGGGGCGGCGATTGGCTCGGTCTCAGGTATGCGCGGTGGCTTAACCGACACCTTTTTGATGCGCT
TAGTTGAGATTTTCAATTCGTTTCCTTCGACCTTGTTGGCGATTATTTTGGCGACGACGCTCGGCCAAAAAGTAACCACG
ATTGTGATTGCGTTGGCGATTACTAACTGGGCGGGCTATGCTCGGTTGATTCGTGGCCAAGTGCTTTCGTTGAAAAATCA
GGAATATGTGCAGGCCGCCCGCACGCTGGGGGCGAGCGAATGGCACATCATTACCAAATATGTGTTGCCCAACATTCTTG
GCCCAATCGCGGTGGCGCTGAGCTTTGGGATTCCCTATGCCATGGTTGCCGAGGCTGGGCTTTCGGTAATTGGGGTTGGG
ATTCGACCACCAGAGCCATCGTGGGGCAACTTGATTAACTTGGGGATTAGCAAAATGCGCGGCTTCCCGCACTTAGCCGT
TTGGCCAACCCTTTTGTTTAGCATCACGCTATTAGCCTTTACGTGGTTTGGCGATGGCTTGCAAGAAATCTTCAACACGA
AAGGGGAACGCTAA

Upstream 100 bases:

>100_bases
TTTATTAGCCGACATCCTGTATAGCATCCTTGATCCGCGGATTAAGCTCGAAGCCTAATTTGGTTGTTCCACGCTCTAGT
CTCAAAGGAGAGCTTGTATC

Downstream 100 bases:

>100_bases
TGGGTGCGCCATTATTGGAAGTCAAGGATCTCAAAGTCGAGTTCAAGCGGCCTGGTGGCGTGGTGCATGCAGTCAACGGG
GTTAATTTTACGCTTGAAGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAVNQLSQPTAQEELPVAESLLKVFWRRYRRNAMALVGLVLVIIFVILAIFAPWIAPYHYNDQNLAATWQKPSSTYWFGT
DDVGRDQLSRIIYAVRTAAIVGLGTSILSLIIGAAIGSVSGMRGGLTDTFLMRLVEIFNSFPSTLLAIILATTLGQKVTT
IVIALAITNWAGYARLIRGQVLSLKNQEYVQAARTLGASEWHIITKYVLPNILGPIAVALSFGIPYAMVAEAGLSVIGVG
IRPPEPSWGNLINLGISKMRGFPHLAVWPTLLFSITLLAFTWFGDGLQEIFNTKGER

Sequences:

>Translated_297_residues
MAVNQLSQPTAQEELPVAESLLKVFWRRYRRNAMALVGLVLVIIFVILAIFAPWIAPYHYNDQNLAATWQKPSSTYWFGT
DDVGRDQLSRIIYAVRTAAIVGLGTSILSLIIGAAIGSVSGMRGGLTDTFLMRLVEIFNSFPSTLLAIILATTLGQKVTT
IVIALAITNWAGYARLIRGQVLSLKNQEYVQAARTLGASEWHIITKYVLPNILGPIAVALSFGIPYAMVAEAGLSVIGVG
IRPPEPSWGNLINLGISKMRGFPHLAVWPTLLFSITLLAFTWFGDGLQEIFNTKGER
>Mature_296_residues
AVNQLSQPTAQEELPVAESLLKVFWRRYRRNAMALVGLVLVIIFVILAIFAPWIAPYHYNDQNLAATWQKPSSTYWFGTD
DVGRDQLSRIIYAVRTAAIVGLGTSILSLIIGAAIGSVSGMRGGLTDTFLMRLVEIFNSFPSTLLAIILATTLGQKVTTI
VIALAITNWAGYARLIRGQVLSLKNQEYVQAARTLGASEWHIITKYVLPNILGPIAVALSFGIPYAMVAEAGLSVIGVGI
RPPEPSWGNLINLGISKMRGFPHLAVWPTLLFSITLLAFTWFGDGLQEIFNTKGER

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=37.0503597122302, Blast_Score=201, Evalue=6e-53,
Organism=Escherichia coli, GI1787760, Length=255, Percent_Identity=35.2941176470588, Blast_Score=170, Evalue=9e-44,
Organism=Escherichia coli, GI1787498, Length=294, Percent_Identity=34.3537414965986, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1789964, Length=301, Percent_Identity=38.5382059800665, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=31.3807531380753, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787549, Length=278, Percent_Identity=29.8561151079137, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=27.1493212669683, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32503; Mature: 32371

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNQLSQPTAQEELPVAESLLKVFWRRYRRNAMALVGLVLVIIFVILAIFAPWIAPYHY
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
NDQNLAATWQKPSSTYWFGTDDVGRDQLSRIIYAVRTAAIVGLGTSILSLIIGAAIGSVS
CCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMRGGLTDTFLMRLVEIFNSFPSTLLAIILATTLGQKVTTIVIALAITNWAGYARLIRGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSLKNQEYVQAARTLGASEWHIITKYVLPNILGPIAVALSFGIPYAMVAEAGLSVIGVG
HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEECC
IRPPEPSWGNLINLGISKMRGFPHLAVWPTLLFSITLLAFTWFGDGLQEIFNTKGER
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVNQLSQPTAQEELPVAESLLKVFWRRYRRNAMALVGLVLVIIFVILAIFAPWIAPYHY
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
NDQNLAATWQKPSSTYWFGTDDVGRDQLSRIIYAVRTAAIVGLGTSILSLIIGAAIGSVS
CCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMRGGLTDTFLMRLVEIFNSFPSTLLAIILATTLGQKVTTIVIALAITNWAGYARLIRGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSLKNQEYVQAARTLGASEWHIITKYVLPNILGPIAVALSFGIPYAMVAEAGLSVIGVG
HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEECC
IRPPEPSWGNLINLGISKMRGFPHLAVWPTLLFSITLLAFTWFGDGLQEIFNTKGER
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]