| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pknK [H]
Identifier: 159898419
GI number: 159898419
Start: 2284237
End: 2286840
Strand: Direct
Name: pknK [H]
Synonym: Haur_1895
Alternate gene names: 159898419
Gene position: 2284237-2286840 (Clockwise)
Preceding gene: 159898416
Following gene: 159898420
Centisome position: 35.99
GC content: 50.31
Gene sequence:
>2604_bases ATGCCGATTGAAATTCTAGCGACCAAACTAGCGATTCCTAGCTTGCGCATGCAGGGTGTACCACGCTTACGGCTCAGCGC TAAACTTGAGCGTGGCTTGAACCAACGCCTTAGTTTGGTGGTAGCACCCGCTGGTTTTGGCAAAACCACCTTGCTGAGTA CATGGTTTGAGCAAACCACCCATGCCAAAGCCTGGTTAACCCTCGATCCACGAGATAATGATCCCTTGCGTTTTTTGGGT TATCTGGTGGCTGCGCTGCAAACCGTCGAGCCAGCGATTGGCCAAAGTGTCCAGCAAGCGCTCCAAGCAGCCCAACCAGC CGCCAGCGAAAACCTGTTAATTAGCCTAATTAACGAGCTACACCAGATTCGCCAACCAATCATTTTGGTGCTCGATGATT ACCATGTGATCGAGCACCAGGCGGTTGACGATATGCTCAACTTTTTGCTCGAACACCAGCCAACTAAGCTACACCTTGTG CTAGCTACGCGCGAAGATCCCCAATTACCGTTGGCTCGCCTGCGTGCTCGTGGTCAATTGAATGAAATTCGAGTAGCCGA TTTGCGCTTTAGTTTGGCTGAAAGTGGCGAGTTTTTGCGCAACGTGATGGGTTTGCAACTGCCAGATCAGGCAATCGCCA AACTCGAAGCTCGTACCGAAGGTTGGATTGCAGGCTTGCAACTGGCAGCACTCTCACTACAAGGCCAGCCCGATCCTAGC AGTTTTATCGAAACCTTCAGCGGCCAACATCAATTTATCTTAGATTATTTGCTCGCAGAGGTTTTGCAACACCAATCAGC CGAAATTCAAACCTTTTTGGTGCAAACCTCAATGCTCGAGCGTATGTGTGGGCCGTTATGCGATGCCGTGTTAAACCAAA CCACCAGCCAAGCCCTGCTCGAACAAATCGATCAGGCTAATTTATTTGTTGTGGCGCTCGATCAACAGCGCTATTGGTAT CGTTATCATCAGCTATTTGGTGATTTATTGCGCCAACGCTTGACCCAACAAGCCAATCCGCAACAGCTTGCAGGCTTGCA TCAACGGGCGAGTGCATGGTATCAACAGCAGGGATTATTGCTCGAAGCGTTTCAGCATGCCACCGCTGCCCACGATTATC AACAGGCCGAGCGATTAATGGAGCAAATGCCGCTGCATTCGAACGGCAATGTCTCGGCGATGCTGAATTGGCTAGCTGGA TTGCCCACTAGTGTGCTTGATCAACAACCATCGTTGTGGGTACGATTTGCAGCAATTTTATTGGTGCTCGGCCAAACCAG CGGAGTTGAACTAAAATTGCAAGCTGCCGAGCGCGGATTACAATCCCTACCAGTAAATCTGCGCAACCGTGATTTACTGG GCCAAATCGCCGCTGCCCGGGCAACCCTAGCCCTCACTCAATATCAGATTGAAACGATTATCCAGCAAGCTCAGCGAGCA TTCGAATATTTACATCCACAGAATTTGCCATTTCGCGCGACTGCCAATTGGGCTTTGGCCTATGCCTATCAAGTACGCGG CGAGCGCCAAAACACCAATATAGCGCTGACTGCTGCGATCAACTTCAGCCAACAATCAAACGATACCTTCACCCTGATTT TGGCTTCGATTGGTATGGGTCAGCTTCAGGAGAGCAATCTTGAGCTACATCGGGCCGCCGCAACCTATCGTCATGTTTTG CAATTGGCGGGTGAGCAACCACAGCAAATTATCTCCGAAGCACATTTGGGTTTAGCACGAATTCATTATCAATGGAATGA TTTGGCCACGACTGAACAGCATGCCCAGCAAAGCCTGCACCTAGCTAGGCAATACGAGCAAGGTATTGATCGTTTTATTG TGGGTGAATTGATGTTGGCCCAACTTAAATTAGCTCGTAACGATCACGTGGGTGCTCAGCGACTGCTCGATCAAACTGAA CAATTGGCACGCCAGCAACATTTTAGTGCCCGTTTTGGCGAGATCGGCTATTGGCGAATTCAACTGCTGTTGCGCCAAGC CAAATTCGCTGCCGCCACCCAACTAGCCACCGAGCATCAACTATTAATCTGCCAAGCCCAAATCGCCTTAGCCCAAGCCA AATCAGCCACAGCAATCGCGTTGCTAGAGCCATTGCAGCAACTAGCCCAAAACTGGCCTGATCAACGCTTGCAAATCGAG TTACTGTTGGCCTTGGCCTATGCTGCCCAGCAACAGCCTGAACCTGCTCTGGTAGCACTCAAACAGGCGATAGCGCTGGC TGAACCACATCAATTAATCCGTAGTTTGCTTGATCATGGGTCAGCAATCCAGCAACTTTTACAATTGGCAAGTGATCATG GTTTCAATTCGCCGTTAATCAAGCATGCATTAATTGAATTTGCTAAGCGCCAGCCCTCAGTTCAGCCACAAACCCACACC CTTGAGCGTTTGAGCGAGCGCGAACTCGAAGTCTTGCAGCAAATTGCCACCGGCCTGACTGACCGCGAAATTGGCGAACG CTTGTATCTCTCCATGTATACCGTCAAAGTGCATGCCCGCAACATTTATGCCAAACTCGAAGTTAGCAATCGCACCCAAG CGGTTGCCCGCGCCCGGACGCTAGGCCTGCTTCCCCATAACTAA
Upstream 100 bases:
>100_bases GCACGCTATGCTCAACGACGGCTTAGTGCAATGGGGCATTGATAGTTAAGCCCTTTAAGCTTATTGACGCTAGCAACTTA CGGCTTTTATAATACAACCT
Downstream 100 bases:
>100_bases ATTTCAAACTACGCAGAATTGAAAATGCTGCCTACCTCGCTGAATAACTCGTTTGAGGTATGACAGGCTGCCCGCCAAAT TATATGCTGCTGGCAGTTAT
Product: ATP-dependent transcription regulator LuxR
Products: NA
Alternate protein names: Protein kinase K [H]
Number of amino acids: Translated: 867; Mature: 866
Protein sequence:
>867_residues MPIEILATKLAIPSLRMQGVPRLRLSAKLERGLNQRLSLVVAPAGFGKTTLLSTWFEQTTHAKAWLTLDPRDNDPLRFLG YLVAALQTVEPAIGQSVQQALQAAQPAASENLLISLINELHQIRQPIILVLDDYHVIEHQAVDDMLNFLLEHQPTKLHLV LATREDPQLPLARLRARGQLNEIRVADLRFSLAESGEFLRNVMGLQLPDQAIAKLEARTEGWIAGLQLAALSLQGQPDPS SFIETFSGQHQFILDYLLAEVLQHQSAEIQTFLVQTSMLERMCGPLCDAVLNQTTSQALLEQIDQANLFVVALDQQRYWY RYHQLFGDLLRQRLTQQANPQQLAGLHQRASAWYQQQGLLLEAFQHATAAHDYQQAERLMEQMPLHSNGNVSAMLNWLAG LPTSVLDQQPSLWVRFAAILLVLGQTSGVELKLQAAERGLQSLPVNLRNRDLLGQIAAARATLALTQYQIETIIQQAQRA FEYLHPQNLPFRATANWALAYAYQVRGERQNTNIALTAAINFSQQSNDTFTLILASIGMGQLQESNLELHRAAATYRHVL QLAGEQPQQIISEAHLGLARIHYQWNDLATTEQHAQQSLHLARQYEQGIDRFIVGELMLAQLKLARNDHVGAQRLLDQTE QLARQQHFSARFGEIGYWRIQLLLRQAKFAAATQLATEHQLLICQAQIALAQAKSATAIALLEPLQQLAQNWPDQRLQIE LLLALAYAAQQQPEPALVALKQAIALAEPHQLIRSLLDHGSAIQQLLQLASDHGFNSPLIKHALIEFAKRQPSVQPQTHT LERLSERELEVLQQIATGLTDREIGERLYLSMYTVKVHARNIYAKLEVSNRTQAVARARTLGLLPHN
Sequences:
>Translated_867_residues MPIEILATKLAIPSLRMQGVPRLRLSAKLERGLNQRLSLVVAPAGFGKTTLLSTWFEQTTHAKAWLTLDPRDNDPLRFLG YLVAALQTVEPAIGQSVQQALQAAQPAASENLLISLINELHQIRQPIILVLDDYHVIEHQAVDDMLNFLLEHQPTKLHLV LATREDPQLPLARLRARGQLNEIRVADLRFSLAESGEFLRNVMGLQLPDQAIAKLEARTEGWIAGLQLAALSLQGQPDPS SFIETFSGQHQFILDYLLAEVLQHQSAEIQTFLVQTSMLERMCGPLCDAVLNQTTSQALLEQIDQANLFVVALDQQRYWY RYHQLFGDLLRQRLTQQANPQQLAGLHQRASAWYQQQGLLLEAFQHATAAHDYQQAERLMEQMPLHSNGNVSAMLNWLAG LPTSVLDQQPSLWVRFAAILLVLGQTSGVELKLQAAERGLQSLPVNLRNRDLLGQIAAARATLALTQYQIETIIQQAQRA FEYLHPQNLPFRATANWALAYAYQVRGERQNTNIALTAAINFSQQSNDTFTLILASIGMGQLQESNLELHRAAATYRHVL QLAGEQPQQIISEAHLGLARIHYQWNDLATTEQHAQQSLHLARQYEQGIDRFIVGELMLAQLKLARNDHVGAQRLLDQTE QLARQQHFSARFGEIGYWRIQLLLRQAKFAAATQLATEHQLLICQAQIALAQAKSATAIALLEPLQQLAQNWPDQRLQIE LLLALAYAAQQQPEPALVALKQAIALAEPHQLIRSLLDHGSAIQQLLQLASDHGFNSPLIKHALIEFAKRQPSVQPQTHT LERLSERELEVLQQIATGLTDREIGERLYLSMYTVKVHARNIYAKLEVSNRTQAVARARTLGLLPHN >Mature_866_residues PIEILATKLAIPSLRMQGVPRLRLSAKLERGLNQRLSLVVAPAGFGKTTLLSTWFEQTTHAKAWLTLDPRDNDPLRFLGY LVAALQTVEPAIGQSVQQALQAAQPAASENLLISLINELHQIRQPIILVLDDYHVIEHQAVDDMLNFLLEHQPTKLHLVL ATREDPQLPLARLRARGQLNEIRVADLRFSLAESGEFLRNVMGLQLPDQAIAKLEARTEGWIAGLQLAALSLQGQPDPSS FIETFSGQHQFILDYLLAEVLQHQSAEIQTFLVQTSMLERMCGPLCDAVLNQTTSQALLEQIDQANLFVVALDQQRYWYR YHQLFGDLLRQRLTQQANPQQLAGLHQRASAWYQQQGLLLEAFQHATAAHDYQQAERLMEQMPLHSNGNVSAMLNWLAGL PTSVLDQQPSLWVRFAAILLVLGQTSGVELKLQAAERGLQSLPVNLRNRDLLGQIAAARATLALTQYQIETIIQQAQRAF EYLHPQNLPFRATANWALAYAYQVRGERQNTNIALTAAINFSQQSNDTFTLILASIGMGQLQESNLELHRAAATYRHVLQ LAGEQPQQIISEAHLGLARIHYQWNDLATTEQHAQQSLHLARQYEQGIDRFIVGELMLAQLKLARNDHVGAQRLLDQTEQ LARQQHFSARFGEIGYWRIQLLLRQAKFAAATQLATEHQLLICQAQIALAQAKSATAIALLEPLQQLAQNWPDQRLQIEL LLALAYAAQQQPEPALVALKQAIALAEPHQLIRSLLDHGSAIQQLLQLASDHGFNSPLIKHALIEFAKRQPSVQPQTHTL ERLSERELEVLQQIATGLTDREIGERLYLSMYTVKVHARNIYAKLEVSNRTQAVARARTLGLLPHN
Specific function: Modulates the activity of transcription regulator virS via phosphorylation [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cell membrane. Note=Probably attached to cell membrane through interactions mediated by its C- terminal region (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=918, Percent_Identity=27.6688453159041, Blast_Score=213, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR016236 - InterPro: IPR011990 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 97363; Mature: 97232
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEILATKLAIPSLRMQGVPRLRLSAKLERGLNQRLSLVVAPAGFGKTTLLSTWFEQTT CCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC HAKAWLTLDPRDNDPLRFLGYLVAALQTVEPAIGQSVQQALQAAQPAASENLLISLINEL CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HQIRQPIILVLDDYHVIEHQAVDDMLNFLLEHQPTKLHLVLATREDPQLPLARLRARGQL HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHCCCC NEIRVADLRFSLAESGEFLRNVMGLQLPDQAIAKLEARTEGWIAGLQLAALSLQGQPDPS CCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH SFIETFSGQHQFILDYLLAEVLQHQSAEIQTFLVQTSMLERMCGPLCDAVLNQTTSQALL HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQIDQANLFVVALDQQRYWYRYHQLFGDLLRQRLTQQANPQQLAGLHQRASAWYQQQGLL HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHH LEAFQHATAAHDYQQAERLMEQMPLHSNGNVSAMLNWLAGLPTSVLDQQPSLWVRFAAIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHH LVLGQTSGVELKLQAAERGLQSLPVNLRNRDLLGQIAAARATLALTQYQIETIIQQAQRA HHHCCCCCCEEEEHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEYLHPQNLPFRATANWALAYAYQVRGERQNTNIALTAAINFSQQSNDTFTLILASIGMG HHHHCCCCCCCEEECCHHEEEHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEHEECCCCC QLQESNLELHRAAATYRHVLQLAGEQPQQIISEAHLGLARIHYQWNDLATTEQHAQQSLH HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHH LARQYEQGIDRFIVGELMLAQLKLARNDHVGAQRLLDQTEQLARQQHFSARFGEIGYWRI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QLLLRQAKFAAATQLATEHQLLICQAQIALAQAKSATAIALLEPLQQLAQNWPDQRLQIE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH LLLALAYAAQQQPEPALVALKQAIALAEPHQLIRSLLDHGSAIQQLLQLASDHGFNSPLI HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH KHALIEFAKRQPSVQPQTHTLERLSERELEVLQQIATGLTDREIGERLYLSMYTVKVHAR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEC NIYAKLEVSNRTQAVARARTLGLLPHN EEEEEEEECCHHHHHHHHHHHCCCCCC >Mature Secondary Structure PIEILATKLAIPSLRMQGVPRLRLSAKLERGLNQRLSLVVAPAGFGKTTLLSTWFEQTT CHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC HAKAWLTLDPRDNDPLRFLGYLVAALQTVEPAIGQSVQQALQAAQPAASENLLISLINEL CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HQIRQPIILVLDDYHVIEHQAVDDMLNFLLEHQPTKLHLVLATREDPQLPLARLRARGQL HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHCCCC NEIRVADLRFSLAESGEFLRNVMGLQLPDQAIAKLEARTEGWIAGLQLAALSLQGQPDPS CCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH SFIETFSGQHQFILDYLLAEVLQHQSAEIQTFLVQTSMLERMCGPLCDAVLNQTTSQALL HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQIDQANLFVVALDQQRYWYRYHQLFGDLLRQRLTQQANPQQLAGLHQRASAWYQQQGLL HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHH LEAFQHATAAHDYQQAERLMEQMPLHSNGNVSAMLNWLAGLPTSVLDQQPSLWVRFAAIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHH LVLGQTSGVELKLQAAERGLQSLPVNLRNRDLLGQIAAARATLALTQYQIETIIQQAQRA HHHCCCCCCEEEEHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEYLHPQNLPFRATANWALAYAYQVRGERQNTNIALTAAINFSQQSNDTFTLILASIGMG HHHHCCCCCCCEEECCHHEEEHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEHEECCCCC QLQESNLELHRAAATYRHVLQLAGEQPQQIISEAHLGLARIHYQWNDLATTEQHAQQSLH HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHH LARQYEQGIDRFIVGELMLAQLKLARNDHVGAQRLLDQTEQLARQQHFSARFGEIGYWRI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QLLLRQAKFAAATQLATEHQLLICQAQIALAQAKSATAIALLEPLQQLAQNWPDQRLQIE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH LLLALAYAAQQQPEPALVALKQAIALAEPHQLIRSLLDHGSAIQQLLQLASDHGFNSPLI HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH KHALIEFAKRQPSVQPQTHTLERLSERELEVLQQIATGLTDREIGERLYLSMYTVKVHAR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEC NIYAKLEVSNRTQAVARARTLGLLPHN EEEEEEEECCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]