| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898396
Identifier: 159898396
GI number: 159898396
Start: 2214053
End: 2214586
Strand: Direct
Name: 159898396
Synonym: Haur_1872
Alternate gene names: NA
Gene position: 2214053-2214586 (Clockwise)
Preceding gene: 159898389
Following gene: 159898397
Centisome position: 34.89
GC content: 44.01
Gene sequence:
>534_bases ATGAGTCAACTTAAAGCCGGTAGTCGGGCAACTATGCCTATGATGGTCGTCGGTGGCTTCCTTGTGTTGGTTGGTCTTTT GGTTTTTTATGCACCTTTTGAAGTCAGCCCTGTGGTGCAAGCGCTGATTCCACTCGTTATGGGGATTGTGATGTTGGTGA TGGCCGTGATCAGTTCCACGGTTTTTTTATTTACTGGCGGGAGTTTATTGACCGGTATTGGCTTAGGCTTTTTGTTGAAT GCAACTGCATTTAGTGATGCCAGCTCGCCAAGCCGCTTTGGGATTTTGTGTGTCACCTTTGGCATAGGTTGGTTGTTTTC GGCGGTTGGGAGCAAATTGGTTTTGAAAAAAAGTGATTGGCTTTCGTTTATTCCGGGGGTGGTTTTTGCTGGTTTTGGTG GCGCTTTATTAGCCAATTTGGTCTCAAGTGATCAAATGACCAATCTGAATCGCTTTTTTGGGCTTTTTCGGTTTTGGCCT TTGATTTTGATTATTGCCGGCTTTACCTTTATGTTTAAACGCTCTAAATCATAA
Upstream 100 bases:
>100_bases TGGTTACTCAGCAAGTGTCCCAACCTGCTGATAGTTAATCCTCAATCAACATCAAAATTTTGCGATCAATCCAAATTCCG TGTGTGTGAAGGGGTTCATA
Downstream 100 bases:
>100_bases ATTTGGCTCACACAACTTCTCACTGCCGCTTAATTGATTTACAACATATTACCCAGAAGAGGCGCTCGTTCTATGACTCA AACGACAACTTCTATCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSQLKAGSRATMPMMVVGGFLVLVGLLVFYAPFEVSPVVQALIPLVMGIVMLVMAVISSTVFLFTGGSLLTGIGLGFLLN ATAFSDASSPSRFGILCVTFGIGWLFSAVGSKLVLKKSDWLSFIPGVVFAGFGGALLANLVSSDQMTNLNRFFGLFRFWP LILIIAGFTFMFKRSKS
Sequences:
>Translated_177_residues MSQLKAGSRATMPMMVVGGFLVLVGLLVFYAPFEVSPVVQALIPLVMGIVMLVMAVISSTVFLFTGGSLLTGIGLGFLLN ATAFSDASSPSRFGILCVTFGIGWLFSAVGSKLVLKKSDWLSFIPGVVFAGFGGALLANLVSSDQMTNLNRFFGLFRFWP LILIIAGFTFMFKRSKS >Mature_176_residues SQLKAGSRATMPMMVVGGFLVLVGLLVFYAPFEVSPVVQALIPLVMGIVMLVMAVISSTVFLFTGGSLLTGIGLGFLLNA TAFSDASSPSRFGILCVTFGIGWLFSAVGSKLVLKKSDWLSFIPGVVFAGFGGALLANLVSSDQMTNLNRFFGLFRFWPL ILIIAGFTFMFKRSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18911; Mature: 18780
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLKAGSRATMPMMVVGGFLVLVGLLVFYAPFEVSPVVQALIPLVMGIVMLVMAVISST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VFLFTGGSLLTGIGLGFLLNATAFSDASSPSRFGILCVTFGIGWLFSAVGSKLVLKKSDW HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCHHH LSFIPGVVFAGFGGALLANLVSSDQMTNLNRFFGLFRFWPLILIIAGFTFMFKRSKS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQLKAGSRATMPMMVVGGFLVLVGLLVFYAPFEVSPVVQALIPLVMGIVMLVMAVISST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VFLFTGGSLLTGIGLGFLLNATAFSDASSPSRFGILCVTFGIGWLFSAVGSKLVLKKSDW HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCHHH LSFIPGVVFAGFGGALLANLVSSDQMTNLNRFFGLFRFWPLILIIAGFTFMFKRSKS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA