| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898334
Identifier: 159898334
GI number: 159898334
Start: 2103527
End: 2103817
Strand: Direct
Name: 159898334
Synonym: Haur_1810
Alternate gene names: NA
Gene position: 2103527-2103817 (Clockwise)
Preceding gene: 159898333
Following gene: 159898338
Centisome position: 33.14
GC content: 44.67
Gene sequence:
>291_bases ATGCAATCTCAGGCAACCATTCCGACCGCACTTGGTTCGAGCTACATCAAAAAATTGTGCAAGCACTACGCCCACAAAAT CAAAGTCGAATACGACGATCAACAAGGTACGGCCTATTTTGCCATGGGCACATGTGCAATGCAAGCTGAAGCTGAACGCT TGATTTTTGTGATTGATGCAGAGACCAGTGAGGCTATTGGAGCCATCCAACACATTATGGATGAACATTTTGAGCAATTT GCCTTTCGCGAAAAACTCAAAATTGAATGGCAAGCGGTCGAGGCTGAATAA
Upstream 100 bases:
>100_bases TGTGGCTAAATATAGCTTCGTGCCCTTCGTGTCCTTCGTGGTTTCATCCTTCGTGTCCTTCGTGGATCAATCAACGACTA TTTTGTATAAGGAGCATTTC
Downstream 100 bases:
>100_bases AGCTTCTGAAAGAGGAGCGATCAGCATTGATTTATGGTTTGTGCCCTTCGTGGATCATCATAATTGATCCACGAAGGGCA CAAGCTTTAACTAGTTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MQSQATIPTALGSSYIKKLCKHYAHKIKVEYDDQQGTAYFAMGTCAMQAEAERLIFVIDAETSEAIGAIQHIMDEHFEQF AFREKLKIEWQAVEAE
Sequences:
>Translated_96_residues MQSQATIPTALGSSYIKKLCKHYAHKIKVEYDDQQGTAYFAMGTCAMQAEAERLIFVIDAETSEAIGAIQHIMDEHFEQF AFREKLKIEWQAVEAE >Mature_96_residues MQSQATIPTALGSSYIKKLCKHYAHKIKVEYDDQQGTAYFAMGTCAMQAEAERLIFVIDAETSEAIGAIQHIMDEHFEQF AFREKLKIEWQAVEAE
Specific function: Unknown
COG id: COG3553
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10931; Mature: 10931
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSQATIPTALGSSYIKKLCKHYAHKIKVEYDDQQGTAYFAMGTCAMQAEAERLIFVIDA CCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECHHHHHCCCCEEEEEEEC ETSEAIGAIQHIMDEHFEQFAFREKLKIEWQAVEAE CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC >Mature Secondary Structure MQSQATIPTALGSSYIKKLCKHYAHKIKVEYDDQQGTAYFAMGTCAMQAEAERLIFVIDA CCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECHHHHHCCCCEEEEEEEC ETSEAIGAIQHIMDEHFEQFAFREKLKIEWQAVEAE CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA