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The map label for this gene is yfhA [H]

Identifier: 159898332

GI number: 159898332

Start: 2101413

End: 2102519

Strand: Direct

Name: yfhA [H]

Synonym: Haur_1808

Alternate gene names: 159898332

Gene position: 2101413-2102519 (Clockwise)

Preceding gene: 159898331

Following gene: 159898333

Centisome position: 33.11

GC content: 55.37

Gene sequence:

>1107_bases
ATGGATCGACTTTCGCTGAACCCAACCACGAGTGCTGCTCACGAGCTAAACCTAGCTCAGCCATTTACAGGCCAACCAAC
TGGCTTGTGGTTGCTGCGCTTTGGCCGTTTGAGCCTGCTGTTGGATCGACGGGCTTGGCTGGCAAGTTTGCTTTTGCTGC
TTGCGACGGTAGTTTTGGTTGGCCTGAGCCTCGGCAGTGGCACAGTCAAAATCGCCCCACTTGATGCCTTGGCAGCTTTG
TTTAATCAAGGCGAAACCAAAAATATCTTTATTGTGCGCGATTTACGGCTGACGCGGGTTTTGGCAGGTGGCATGGCTGG
CGCTGCTTTGGGTATGGCTGGCTGTTTGTTGCAAACGCTCAGTCGCAATCGGCTGGCCAACCCCGATACGATTGGGATCG
ATAATGCTGCGACGGCCTTTGCGGTTGCCTCGGTTGTGGGAGTTAGCACAACTCTCGCGCCCTCAGGCATGGCCTTGATT
GGCGCAATCACCATGCTTTCCTTAACCTTTGCCTTGAGTGGCGGGGCTGGCACACGTGGCTATCGTTTCTTAATCACTGG
GCTGGGCTTGGGCGCAATCTGTGGAGCTGCCACCAATTTGATGCTAGCACGTGCCCCAATTGATGCTGCCAACGATGCTT
TTCCTTGGACAATTGGCAGCTTGAACGATCGTTCGGGAATTACTGTAAGTTTGCTGGCTTGGGGCGTGGTGATATTACTC
CCGCTGGCTGCGATCGTGGGTAAACGCCTTAATTTGGTGCGCTTGCCCGATGCGGTTGCCCAAAGTTTGGGGGTGCGGGT
CAATCGCTTGCGCTTCTTCACGATTTTGTTGGCGGGCAGCTTGACCGGCCTTGCGGTTGCGGTTGCTGGCCCTGTTGGCA
TGATTGGCTTGGCGGCACCTGAATTAGGGCGGCGCTTGGCTGGCCCGCGCACTGTGCCGATTGTGCCTTCGGCCTTGGCT
GGCGCATGCTTTACCATGCTGGCTGATTTGCTTGGCCGCACTTTGTTCAGCCCAACTGAAATTCCGGTGGGCATTGTTAC
AGCCTTAGTTGGCGGCCCTTACTTATTATGGTTCCTGTTGCGAACCCCGCGAGGCAAACAATTATGA

Upstream 100 bases:

>100_bases
AACCGAAACCCCGCTGGGTGTGATTTCAGCATTAATTGGTGCGCCAATTTTGGTGCTGATTGTGCGCAGCCAACGCTTAC
CAGCGCTCTAGGAGAATGGC

Downstream 100 bases:

>100_bases
GTGTTTCTCCCCCAGCGGCGTTGCAAACCCAAAATTTGGTCTTGGGCTACCAACGCACAACGATTATTGATCAGCTGAAT
GCCTCGATTCCCCATGGCCA

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MDRLSLNPTTSAAHELNLAQPFTGQPTGLWLLRFGRLSLLLDRRAWLASLLLLLATVVLVGLSLGSGTVKIAPLDALAAL
FNQGETKNIFIVRDLRLTRVLAGGMAGAALGMAGCLLQTLSRNRLANPDTIGIDNAATAFAVASVVGVSTTLAPSGMALI
GAITMLSLTFALSGGAGTRGYRFLITGLGLGAICGAATNLMLARAPIDAANDAFPWTIGSLNDRSGITVSLLAWGVVILL
PLAAIVGKRLNLVRLPDAVAQSLGVRVNRLRFFTILLAGSLTGLAVAVAGPVGMIGLAAPELGRRLAGPRTVPIVPSALA
GACFTMLADLLGRTLFSPTEIPVGIVTALVGGPYLLWFLLRTPRGKQL

Sequences:

>Translated_368_residues
MDRLSLNPTTSAAHELNLAQPFTGQPTGLWLLRFGRLSLLLDRRAWLASLLLLLATVVLVGLSLGSGTVKIAPLDALAAL
FNQGETKNIFIVRDLRLTRVLAGGMAGAALGMAGCLLQTLSRNRLANPDTIGIDNAATAFAVASVVGVSTTLAPSGMALI
GAITMLSLTFALSGGAGTRGYRFLITGLGLGAICGAATNLMLARAPIDAANDAFPWTIGSLNDRSGITVSLLAWGVVILL
PLAAIVGKRLNLVRLPDAVAQSLGVRVNRLRFFTILLAGSLTGLAVAVAGPVGMIGLAAPELGRRLAGPRTVPIVPSALA
GACFTMLADLLGRTLFSPTEIPVGIVTALVGGPYLLWFLLRTPRGKQL
>Mature_368_residues
MDRLSLNPTTSAAHELNLAQPFTGQPTGLWLLRFGRLSLLLDRRAWLASLLLLLATVVLVGLSLGSGTVKIAPLDALAAL
FNQGETKNIFIVRDLRLTRVLAGGMAGAALGMAGCLLQTLSRNRLANPDTIGIDNAATAFAVASVVGVSTTLAPSGMALI
GAITMLSLTFALSGGAGTRGYRFLITGLGLGAICGAATNLMLARAPIDAANDAFPWTIGSLNDRSGITVSLLAWGVVILL
PLAAIVGKRLNLVRLPDAVAQSLGVRVNRLRFFTILLAGSLTGLAVAVAGPVGMIGLAAPELGRRLAGPRTVPIVPSALA
GACFTMLADLLGRTLFSPTEIPVGIVTALVGGPYLLWFLLRTPRGKQL

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=326, Percent_Identity=33.4355828220859, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1786804, Length=329, Percent_Identity=34.0425531914894, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1790741, Length=278, Percent_Identity=36.3309352517986, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786347, Length=276, Percent_Identity=31.1594202898551, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1786805, Length=296, Percent_Identity=34.1216216216216, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788004, Length=309, Percent_Identity=30.0970873786408, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38024; Mature: 38024

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLSLNPTTSAAHELNLAQPFTGQPTGLWLLRFGRLSLLLDRRAWLASLLLLLATVVLV
CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSLGSGTVKIAPLDALAALFNQGETKNIFIVRDLRLTRVLAGGMAGAALGMAGCLLQTL
HHCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHH
SRNRLANPDTIGIDNAATAFAVASVVGVSTTLAPSGMALIGAITMLSLTFALSGGAGTRG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
YRFLITGLGLGAICGAATNLMLARAPIDAANDAFPWTIGSLNDRSGITVSLLAWGVVILL
EEEEEECCCHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
PLAAIVGKRLNLVRLPDAVAQSLGVRVNRLRFFTILLAGSLTGLAVAVAGPVGMIGLAAP
HHHHHHCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCH
ELGRRLAGPRTVPIVPSALAGACFTMLADLLGRTLFSPTEIPVGIVTALVGGPYLLWFLL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH
RTPRGKQL
HCCCCCCC
>Mature Secondary Structure
MDRLSLNPTTSAAHELNLAQPFTGQPTGLWLLRFGRLSLLLDRRAWLASLLLLLATVVLV
CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSLGSGTVKIAPLDALAALFNQGETKNIFIVRDLRLTRVLAGGMAGAALGMAGCLLQTL
HHCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHH
SRNRLANPDTIGIDNAATAFAVASVVGVSTTLAPSGMALIGAITMLSLTFALSGGAGTRG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
YRFLITGLGLGAICGAATNLMLARAPIDAANDAFPWTIGSLNDRSGITVSLLAWGVVILL
EEEEEECCCHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
PLAAIVGKRLNLVRLPDAVAQSLGVRVNRLRFFTILLAGSLTGLAVAVAGPVGMIGLAAP
HHHHHHCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCH
ELGRRLAGPRTVPIVPSALAGACFTMLADLLGRTLFSPTEIPVGIVTALVGGPYLLWFLL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH
RTPRGKQL
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]