Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898276

Identifier: 159898276

GI number: 159898276

Start: 2038634

End: 2040031

Strand: Direct

Name: 159898276

Synonym: Haur_1752

Alternate gene names: NA

Gene position: 2038634-2040031 (Clockwise)

Preceding gene: 159898275

Following gene: 159898277

Centisome position: 32.12

GC content: 50.57

Gene sequence:

>1398_bases
ATGCGTCGTATGATCGTTTTTGCTATTGTTGTCTTGTTGATGGCCGCGTGTAGCTCGCAATGGCCTAGCGCCCCAATTGC
CAAAAGTACTCCTCATAATCCAGCCAATTTTCCTCCCAGCCCGCAAAACTCACCTACCATTGGTCAATGCCCGGTTTTTC
CACTTGATAACATTTGGAATACCCCAATCGACACCTTGCCTGTCCACCCTCGTTCGAGCCAATATATTGCCAGCATTGGC
GGCAGCGAAACCTTGCACCCTGATTTTGGCGCGGCCCAATGGAATGGTGGTGATATTGGGATTCCCTATGTGGTTGTGCC
CGCTAACCAACCAACTGTGACCGTTAATTTTGTCGATTATCCGCATGAGAGTGACCCCACCACTGGCTCAGGCCAATACC
CAGTGCCACCGAATGCGCCACGTGAGCATGGTAGCGACCATCATGTGTTGGTGGTGCGTGAAGGTGAATGTAAGCTGTAT
GAGCTGTACAATGCCACCAAAATTAACGATACAACTTGGAATGCCAGTAACGGAGCAATCTTTGATTTACGCTCGAATAG
CTTACGACCTGATACCTGGACTTCCGCTGATGCAGCAGGTTTGCCAATCTTGCCTGGCTTAGTGCGCTACGAAGAGGTGC
AAGCAGGCGAGATCAACCATGCAATTCGCTTTACGATTCAGCGTTCACAACGGGCCTATGTCTGGCCAGCGCGGCATTTT
GCGTCATCAATTACCGACCAAAATGTGCCACCAATGGGTATGCGCTTTCGGCTCAAGGCATCGTTTGATATTTCGGGGTT
TTCCAGCGAGATGCAAGTTATTTTGCGGGCAATGCAGCGCTATGGCATCATTGTGGCCGATAATGGTTCAGATTGGTATA
TTTCTGGCGCACCGAATCCCAATTGGGATGACGATAATTTGGTGAGTAGTTTCGACCAAATTCGCGGTGATCATTTTGAA
GCTATGGATAGCTCGAGCTTGCAACTCAACCCTGATTCGGCAGCGGTTATCGCTAGTGCTGCCCCGCAACCAAGCAAATT
GGCCGAATTTGGGGGCGTTGATCAAGGCCAACAATTGCGCTATGCGATTACAGTGGTTGGCACAGGCAGCCCACAAACCA
TGAATGATCAACTGCCTGATGGCCTAACAATTGTTCCGGCGAGCGCCACGATTAACCCAAGCAATTTGGCGGCCCCAGCC
ATTAGCAACAATAGTGTTCAGTGGAGCGGCACAATTCCCAATTCGCAGAGTGCGGTGATTAGCTTTCGTGCAACGGTCAG
CACCAACGAGCGCCGCGTTATTATCAATACTGCCCAGATTAATGCTGCCACAGTGCAGGCCAGCATTATTGCCAATGGCT
ATCGTGTTTGGTCGCCCATGGTGCGCAAACTGAAGTAG

Upstream 100 bases:

>100_bases
ATGAGCGAGCCAAGTACTTAACTAGCGACAAGGCAAAAAGGCTGTGGTAGACTGCCAATAGCGCTCCCTGATTATCCGCA
GCAAACCAAAGGAGGCCTTG

Downstream 100 bases:

>100_bases
GAGGTTTTGTGAACGAATTCGAGCCGATCTATCATCCTGAAAGTCGCCCGCTGAGTGTATGGCTTGCGCCAAGTAGCAAA
CTTGCCCGTGCTGATCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MRRMIVFAIVVLLMAACSSQWPSAPIAKSTPHNPANFPPSPQNSPTIGQCPVFPLDNIWNTPIDTLPVHPRSSQYIASIG
GSETLHPDFGAAQWNGGDIGIPYVVVPANQPTVTVNFVDYPHESDPTTGSGQYPVPPNAPREHGSDHHVLVVREGECKLY
ELYNATKINDTTWNASNGAIFDLRSNSLRPDTWTSADAAGLPILPGLVRYEEVQAGEINHAIRFTIQRSQRAYVWPARHF
ASSITDQNVPPMGMRFRLKASFDISGFSSEMQVILRAMQRYGIIVADNGSDWYISGAPNPNWDDDNLVSSFDQIRGDHFE
AMDSSSLQLNPDSAAVIASAAPQPSKLAEFGGVDQGQQLRYAITVVGTGSPQTMNDQLPDGLTIVPASATINPSNLAAPA
ISNNSVQWSGTIPNSQSAVISFRATVSTNERRVIINTAQINAATVQASIIANGYRVWSPMVRKLK

Sequences:

>Translated_465_residues
MRRMIVFAIVVLLMAACSSQWPSAPIAKSTPHNPANFPPSPQNSPTIGQCPVFPLDNIWNTPIDTLPVHPRSSQYIASIG
GSETLHPDFGAAQWNGGDIGIPYVVVPANQPTVTVNFVDYPHESDPTTGSGQYPVPPNAPREHGSDHHVLVVREGECKLY
ELYNATKINDTTWNASNGAIFDLRSNSLRPDTWTSADAAGLPILPGLVRYEEVQAGEINHAIRFTIQRSQRAYVWPARHF
ASSITDQNVPPMGMRFRLKASFDISGFSSEMQVILRAMQRYGIIVADNGSDWYISGAPNPNWDDDNLVSSFDQIRGDHFE
AMDSSSLQLNPDSAAVIASAAPQPSKLAEFGGVDQGQQLRYAITVVGTGSPQTMNDQLPDGLTIVPASATINPSNLAAPA
ISNNSVQWSGTIPNSQSAVISFRATVSTNERRVIINTAQINAATVQASIIANGYRVWSPMVRKLK
>Mature_465_residues
MRRMIVFAIVVLLMAACSSQWPSAPIAKSTPHNPANFPPSPQNSPTIGQCPVFPLDNIWNTPIDTLPVHPRSSQYIASIG
GSETLHPDFGAAQWNGGDIGIPYVVVPANQPTVTVNFVDYPHESDPTTGSGQYPVPPNAPREHGSDHHVLVVREGECKLY
ELYNATKINDTTWNASNGAIFDLRSNSLRPDTWTSADAAGLPILPGLVRYEEVQAGEINHAIRFTIQRSQRAYVWPARHF
ASSITDQNVPPMGMRFRLKASFDISGFSSEMQVILRAMQRYGIIVADNGSDWYISGAPNPNWDDDNLVSSFDQIRGDHFE
AMDSSSLQLNPDSAAVIASAAPQPSKLAEFGGVDQGQQLRYAITVVGTGSPQTMNDQLPDGLTIVPASATINPSNLAAPA
ISNNSVQWSGTIPNSQSAVISFRATVSTNERRVIINTAQINAATVQASIIANGYRVWSPMVRKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50412; Mature: 50412

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMIVFAIVVLLMAACSSQWPSAPIAKSTPHNPANFPPSPQNSPTIGQCPVFPLDNIWN
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPIDTLPVHPRSSQYIASIGGSETLHPDFGAAQWNGGDIGIPYVVVPANQPTVTVNFVDY
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCEEEEEEEEC
PHESDPTTGSGQYPVPPNAPREHGSDHHVLVVREGECKLYELYNATKINDTTWNASNGAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEECCCCEECCCCCEE
FDLRSNSLRPDTWTSADAAGLPILPGLVRYEEVQAGEINHAIRFTIQRSQRAYVWPARHF
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCHHHH
ASSITDQNVPPMGMRFRLKASFDISGFSSEMQVILRAMQRYGIIVADNGSDWYISGAPNP
HHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCCCC
NWDDDNLVSSFDQIRGDHFEAMDSSSLQLNPDSAAVIASAAPQPSKLAEFGGVDQGQQLR
CCCCHHHHHHHHHHCCCCCHHCCCCCEEECCCCCEEEEECCCCHHHHHHHCCCCCCCEEE
YAITVVGTGSPQTMNDQLPDGLTIVPASATINPSNLAAPAISNNSVQWSGTIPNSQSAVI
EEEEEEECCCCCCCCCCCCCCEEEEECCCEECHHHCCCCCCCCCCEEEECCCCCCCCEEE
SFRATVSTNERRVIINTAQINAATVQASIIANGYRVWSPMVRKLK
EEEEEECCCCCEEEEEEEEECEEEEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MRRMIVFAIVVLLMAACSSQWPSAPIAKSTPHNPANFPPSPQNSPTIGQCPVFPLDNIWN
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPIDTLPVHPRSSQYIASIGGSETLHPDFGAAQWNGGDIGIPYVVVPANQPTVTVNFVDY
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCEEEEEEEEC
PHESDPTTGSGQYPVPPNAPREHGSDHHVLVVREGECKLYELYNATKINDTTWNASNGAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEECCCCEECCCCCEE
FDLRSNSLRPDTWTSADAAGLPILPGLVRYEEVQAGEINHAIRFTIQRSQRAYVWPARHF
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCHHHH
ASSITDQNVPPMGMRFRLKASFDISGFSSEMQVILRAMQRYGIIVADNGSDWYISGAPNP
HHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCCCC
NWDDDNLVSSFDQIRGDHFEAMDSSSLQLNPDSAAVIASAAPQPSKLAEFGGVDQGQQLR
CCCCHHHHHHHHHHCCCCCHHCCCCCEEECCCCCEEEEECCCCHHHHHHHCCCCCCCEEE
YAITVVGTGSPQTMNDQLPDGLTIVPASATINPSNLAAPAISNNSVQWSGTIPNSQSAVI
EEEEEEECCCCCCCCCCCCCCEEEEECCCEECHHHCCCCCCCCCCEEEECCCCCCCCEEE
SFRATVSTNERRVIINTAQINAATVQASIIANGYRVWSPMVRKLK
EEEEEECCCCCEEEEEEEEECEEEEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA