| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898227
Identifier: 159898227
GI number: 159898227
Start: 1981595
End: 1982029
Strand: Direct
Name: 159898227
Synonym: Haur_1703
Alternate gene names: NA
Gene position: 1981595-1982029 (Clockwise)
Preceding gene: 159898222
Following gene: 159898228
Centisome position: 31.22
GC content: 46.67
Gene sequence:
>435_bases ATGAATGTGGGTGTAGGACGGCGGATACTGTTGTGGGGTGTTGGCGTGTTAATGGCGTTGGTTGCGGCAGTTCCTTCAGC TGGGTATGCTGCGATGCCGCAATCGGCCTTTGCTGTGCCAGGTTGTAGTATCGTTGTTAATAAACCCTCGGTTGGCACCC GCAAAATTAATAATCAATCTGTGTCTGTGGTCATTGGCTATGTCCAAGTGAATTGCAATACAACCCAGAGCCAAATTACA ATCAATCGCACGATTCAAAAAAGCCAAGGCAATCAAGTGCTTATCTCCTATACAGCCCAACCTGCGTATACCTGCTATCA AGTTAAGTGGTGTGGTGCTGAAGTTTGGTATTCCTATTCGTCAGGCACATGGCAAACCTTTGGTTCGTCAAGCCATACCG ATTATGTGATTGGCTCAGGCACGATTAATCTCTAA
Upstream 100 bases:
>100_bases TAGGTTGTTGACTGCGGCTAGGCTATTGTACAACACATACCTGTGCTGCTTGACGCAGCCAAATGTGAGCATTAGTTTGT GATTTGGAAGGAGTTTTCTG
Downstream 100 bases:
>100_bases AGCTGGCTGGATTCGTATTTTGTAGGGCAAATTGTTAATCAAGGAACATACAATGAAGATATACCTCCGACTTACACTGG CTCTGATTGTTTTCAGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNVGVGRRILLWGVGVLMALVAAVPSAGYAAMPQSAFAVPGCSIVVNKPSVGTRKINNQSVSVVIGYVQVNCNTTQSQIT INRTIQKSQGNQVLISYTAQPAYTCYQVKWCGAEVWYSYSSGTWQTFGSSSHTDYVIGSGTINL
Sequences:
>Translated_144_residues MNVGVGRRILLWGVGVLMALVAAVPSAGYAAMPQSAFAVPGCSIVVNKPSVGTRKINNQSVSVVIGYVQVNCNTTQSQIT INRTIQKSQGNQVLISYTAQPAYTCYQVKWCGAEVWYSYSSGTWQTFGSSSHTDYVIGSGTINL >Mature_144_residues MNVGVGRRILLWGVGVLMALVAAVPSAGYAAMPQSAFAVPGCSIVVNKPSVGTRKINNQSVSVVIGYVQVNCNTTQSQIT INRTIQKSQGNQVLISYTAQPAYTCYQVKWCGAEVWYSYSSGTWQTFGSSSHTDYVIGSGTINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15390; Mature: 15390
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVGVGRRILLWGVGVLMALVAAVPSAGYAAMPQSAFAVPGCSIVVNKPSVGTRKINNQS CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEECCCE VSVVIGYVQVNCNTTQSQITINRTIQKSQGNQVLISYTAQPAYTCYQVKWCGAEVWYSYS EEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEC SGTWQTFGSSSHTDYVIGSGTINL CCEEEECCCCCCCCEEEECCEECC >Mature Secondary Structure MNVGVGRRILLWGVGVLMALVAAVPSAGYAAMPQSAFAVPGCSIVVNKPSVGTRKINNQS CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEECCCE VSVVIGYVQVNCNTTQSQITINRTIQKSQGNQVLISYTAQPAYTCYQVKWCGAEVWYSYS EEEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECCEEEEEEEC SGTWQTFGSSSHTDYVIGSGTINL CCEEEECCCCCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA