| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cyaB [H]
Identifier: 159898134
GI number: 159898134
Start: 1870242
End: 1871828
Strand: Direct
Name: cyaB [H]
Synonym: Haur_1610
Alternate gene names: 159898134
Gene position: 1870242-1871828 (Clockwise)
Preceding gene: 159898133
Following gene: 159898135
Centisome position: 29.47
GC content: 51.86
Gene sequence:
>1587_bases ATGCCCGAACAACTACACCATGAACTCTCGTTATGCCATCGAGAGCTACGGGCGATCTACGACCTCGATGCGCTCCGCGA TACAACCGACTCGACCGAAACCTTTTTAACTGGCTGTGCCGCAATTATTCGTGGGGTGTTGCAGCCCGATTTGCTGCAAT TAATTACCCTTGATTTGGAAGATTGCCCCGCCCAAAATATTACAATTGAACGCTGGCGGCCACAGGATGCTGCTAGTTTG ATGCTGGCCCTGACTAATGCGTTGGCTGGCGGCGAAACCTCAACCTTGCAAGAGGGCGATTCAGAAATTATTGTGCGTTC GCTCTCGGTTAAGGGTGAGCGGCTGGGTGTGTTGGTGCTTGGCTCGGCTGATCACCATTGGTCGGCTGATAATCGGCGTT TGATGGATGCTATGTGTTCGCAAATCGATTCGGCCATGGCTGGCTTGCGCCTATTCCAACAAGTGCAATCGCGCAACCGC GAACTCGAAACGATCTATCGTTTGGATCGCTTGATCGATGCCACGCCCGATTTCGATCAAGGTTTGGGAGCAGCATTGGG CTTGCTCTCCGAGACGATTGGCGCTGCTTGGAGCTTTATTATGCTCTACACCGCCGAGGAGCATGAGCTTGAATTTCGTG CCGCTTCGCACGCTGATGTGGCCGACCCGTGCACTGAAGTGTCGCAAGTCTTGCGCGATTTGGCCCGCCAAACCGTTGAT CAAGGCAAATTGGTGCGCCGCGAACAGATCGATCAAACAATTGGAGCCTATATCGGCGTGCCCTTGATTTTGAAAAATCA AATTATTGGGGTTTTTGGTGGGGCGAATCCGCCAGGCACACGTGGTTTTAGCATTCACGAAGTTAAAATGCTGAACGCAA TTGCTTCGCAAATGGATACGGCGCTGTTTGAAGATCGCCAACAACGCCATATTCGCGAAACGTTTGCCCGCTATGTCAGC CCCGATGTAGTCGATTTGATGTTGCGCACGCCTGGCAATGATTATCTGAATGTGCATCGTCAACAATTATCGATGCTTTT TTCCGATATGCGCGGCTTTACCACGGTTTCCGAACAATTGCCTGCCGATGTGGTTGCTCGCATGCTCAACGAACATCTCT CGGCCATGACCACGATTATTCGCAATGCAGGTGGCACGGTCGATAAATTTGTGGGCGATGAAATTGTGGCCTTTTTTGGT GCGCCCTTGCCCTATGAGCAACACCCTTTGTTGGCGGTGCAAACTGGCTTGTTGATGCAGGCCCGTCATAACGAATTGAT GACCGAATGGCAGAAGCAAGGCTTGCCAGCAGTGGCAATTGGCATTGGGATTGCCTCAGGCGAGGTGGTCGTGGGCAATA TCGGCTCGTCGCAAATGATGAATTACACCGCGATTGGCTCGGATATGAATTTAGCAGCCCGCTTGTGTAGTGCCGCGTTG CCCAACCAAATTTTGGTCAGCCAAGCCACCTATGATGCGGTGCGTGAGCAAGTTCAGGCTGTGCCAGTGGCCCCATTGAG CTTGCGGCATATTTCGCAATTAGTGCAAGCCTACAGTATTGAAGCAGTGCTGAGTACTCAAGCCTAA
Upstream 100 bases:
>100_bases TGGTGCTGTCGCCCTTTTTTGTGCTATTCCGGCGCTGGCAGTTCATGCTATACTGGCGTTGTTAATCCACGTTTTGCTGG CTCAAGGAGGTGCTGCGCGT
Downstream 100 bases:
>100_bases GCGCAGCTTGGGACTGCTGTAACTTTGGATGTAGTGACGATCACGAGATCTATATTTAGGGGGTGCAGGGGGATTAAAGC CCCCTGCGTTTCCCTCCGGC
Product: GAF sensor-containing adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MPEQLHHELSLCHRELRAIYDLDALRDTTDSTETFLTGCAAIIRGVLQPDLLQLITLDLEDCPAQNITIERWRPQDAASL MLALTNALAGGETSTLQEGDSEIIVRSLSVKGERLGVLVLGSADHHWSADNRRLMDAMCSQIDSAMAGLRLFQQVQSRNR ELETIYRLDRLIDATPDFDQGLGAALGLLSETIGAAWSFIMLYTAEEHELEFRAASHADVADPCTEVSQVLRDLARQTVD QGKLVRREQIDQTIGAYIGVPLILKNQIIGVFGGANPPGTRGFSIHEVKMLNAIASQMDTALFEDRQQRHIRETFARYVS PDVVDLMLRTPGNDYLNVHRQQLSMLFSDMRGFTTVSEQLPADVVARMLNEHLSAMTTIIRNAGGTVDKFVGDEIVAFFG APLPYEQHPLLAVQTGLLMQARHNELMTEWQKQGLPAVAIGIGIASGEVVVGNIGSSQMMNYTAIGSDMNLAARLCSAAL PNQILVSQATYDAVREQVQAVPVAPLSLRHISQLVQAYSIEAVLSTQA
Sequences:
>Translated_528_residues MPEQLHHELSLCHRELRAIYDLDALRDTTDSTETFLTGCAAIIRGVLQPDLLQLITLDLEDCPAQNITIERWRPQDAASL MLALTNALAGGETSTLQEGDSEIIVRSLSVKGERLGVLVLGSADHHWSADNRRLMDAMCSQIDSAMAGLRLFQQVQSRNR ELETIYRLDRLIDATPDFDQGLGAALGLLSETIGAAWSFIMLYTAEEHELEFRAASHADVADPCTEVSQVLRDLARQTVD QGKLVRREQIDQTIGAYIGVPLILKNQIIGVFGGANPPGTRGFSIHEVKMLNAIASQMDTALFEDRQQRHIRETFARYVS PDVVDLMLRTPGNDYLNVHRQQLSMLFSDMRGFTTVSEQLPADVVARMLNEHLSAMTTIIRNAGGTVDKFVGDEIVAFFG APLPYEQHPLLAVQTGLLMQARHNELMTEWQKQGLPAVAIGIGIASGEVVVGNIGSSQMMNYTAIGSDMNLAARLCSAAL PNQILVSQATYDAVREQVQAVPVAPLSLRHISQLVQAYSIEAVLSTQA >Mature_527_residues PEQLHHELSLCHRELRAIYDLDALRDTTDSTETFLTGCAAIIRGVLQPDLLQLITLDLEDCPAQNITIERWRPQDAASLM LALTNALAGGETSTLQEGDSEIIVRSLSVKGERLGVLVLGSADHHWSADNRRLMDAMCSQIDSAMAGLRLFQQVQSRNRE LETIYRLDRLIDATPDFDQGLGAALGLLSETIGAAWSFIMLYTAEEHELEFRAASHADVADPCTEVSQVLRDLARQTVDQ GKLVRREQIDQTIGAYIGVPLILKNQIIGVFGGANPPGTRGFSIHEVKMLNAIASQMDTALFEDRQQRHIRETFARYVSP DVVDLMLRTPGNDYLNVHRQQLSMLFSDMRGFTTVSEQLPADVVARMLNEHLSAMTTIIRNAGGTVDKFVGDEIVAFFGA PLPYEQHPLLAVQTGLLMQARHNELMTEWQKQGLPAVAIGIGIASGEVVVGNIGSSQMMNYTAIGSDMNLAARLCSAALP NQILVSQATYDAVREQVQAVPVAPLSLRHISQLVQAYSIEAVLSTQA
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Homo sapiens, GI4557257, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 57979; Mature: 57848
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQLHHELSLCHRELRAIYDLDALRDTTDSTETFLTGCAAIIRGVLQPDLLQLITLDLE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCHH DCPAQNITIERWRPQDAASLMLALTNALAGGETSTLQEGDSEIIVRSLSVKGERLGVLVL CCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCEEEEEEE GSADHHWSADNRRLMDAMCSQIDSAMAGLRLFQQVQSRNRELETIYRLDRLIDATPDFDQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH GLGAALGLLSETIGAAWSFIMLYTAEEHELEFRAASHADVADPCTEVSQVLRDLARQTVD HHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QGKLVRREQIDQTIGAYIGVPLILKNQIIGVFGGANPPGTRGFSIHEVKMLNAIASQMDT HHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH ALFEDRQQRHIRETFARYVSPDVVDLMLRTPGNDYLNVHRQQLSMLFSDMRGFTTVSEQL HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHC PADVVARMLNEHLSAMTTIIRNAGGTVDKFVGDEIVAFFGAPLPYEQHPLLAVQTGLLMQ CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ARHNELMTEWQKQGLPAVAIGIGIASGEVVVGNIGSSQMMNYTAIGSDMNLAARLCSAAL HHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCCHHHCCCEECCCCHHHHHHHHHHHC PNQILVSQATYDAVREQVQAVPVAPLSLRHISQLVQAYSIEAVLSTQA CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PEQLHHELSLCHRELRAIYDLDALRDTTDSTETFLTGCAAIIRGVLQPDLLQLITLDLE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCHH DCPAQNITIERWRPQDAASLMLALTNALAGGETSTLQEGDSEIIVRSLSVKGERLGVLVL CCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCEEEEEEE GSADHHWSADNRRLMDAMCSQIDSAMAGLRLFQQVQSRNRELETIYRLDRLIDATPDFDQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH GLGAALGLLSETIGAAWSFIMLYTAEEHELEFRAASHADVADPCTEVSQVLRDLARQTVD HHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QGKLVRREQIDQTIGAYIGVPLILKNQIIGVFGGANPPGTRGFSIHEVKMLNAIASQMDT HHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH ALFEDRQQRHIRETFARYVSPDVVDLMLRTPGNDYLNVHRQQLSMLFSDMRGFTTVSEQL HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHC PADVVARMLNEHLSAMTTIIRNAGGTVDKFVGDEIVAFFGAPLPYEQHPLLAVQTGLLMQ CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ARHNELMTEWQKQGLPAVAIGIGIASGEVVVGNIGSSQMMNYTAIGSDMNLAARLCSAAL HHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCCHHHCCCEECCCCHHHHHHHHHHHC PNQILVSQATYDAVREQVQAVPVAPLSLRHISQLVQAYSIEAVLSTQA CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]