Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897913

Identifier: 159897913

GI number: 159897913

Start: 1601316

End: 1601765

Strand: Reverse

Name: 159897913

Synonym: Haur_1387

Alternate gene names: NA

Gene position: 1601765-1601316 (Counterclockwise)

Preceding gene: 159897914

Following gene: 159897912

Centisome position: 25.24

GC content: 56.44

Gene sequence:

>450_bases
ATGGATAGTCTACTGATTGGTGCGGTGGTATGGCTGATCGGCCTCACCATTGTCGTGATGGTTGGGGCATGGATGTTTGC
GCGGGGCTACCTCTCGGTTGTCCGCGAAAACGTTAGCTTGAAAGCCGAGTTGCATGCCGTGCGTGATGCGGCTAAACGCG
AACTGGCGGCACTCAGTGCCCAGTTCGATTTGGCGCTGAGCGCCTTGCGGCGTGAAGTGATCAATGCCCGTGAACGCTGG
ACGATCGATGCCTATGCGCTCATGGATGCCCAGTTGTACATCCAAGCCCTCGAAGACACCTGTCATCACCATCAGATCCC
CTTGCCCAAAAAGCCTCGGCGGGCAGGCCTTGATCGCCCAACCACCTCTCCACGAACCGACGATCAACACACGGGGCTTG
ACCCCATTGATGAATTATTATCACCCCTTGGACAAGGAGCATCGGTATGA

Upstream 100 bases:

>100_bases
CTGCACAGACCAATTTAACCTGTTGCTTTTTGTTTTCCTCCTTTCTGTGCAAACCCCTTCTTGCCTGGCCTTCGCTTCCT
CCTGATGTGGTTGGGGATCT

Downstream 100 bases:

>100_bases
CCCTAACTCAAACCGCCATCGCGCTGGTCATTGTGACCACCCTCTCGTTCGCTGTTGGTTTTCTCAAATCGGCTGCCCCC
AAAGCGGCAAACGCCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MDSLLIGAVVWLIGLTIVVMVGAWMFARGYLSVVRENVSLKAELHAVRDAAKRELAALSAQFDLALSALRREVINARERW
TIDAYALMDAQLYIQALEDTCHHHQIPLPKKPRRAGLDRPTTSPRTDDQHTGLDPIDELLSPLGQGASV

Sequences:

>Translated_149_residues
MDSLLIGAVVWLIGLTIVVMVGAWMFARGYLSVVRENVSLKAELHAVRDAAKRELAALSAQFDLALSALRREVINARERW
TIDAYALMDAQLYIQALEDTCHHHQIPLPKKPRRAGLDRPTTSPRTDDQHTGLDPIDELLSPLGQGASV
>Mature_149_residues
MDSLLIGAVVWLIGLTIVVMVGAWMFARGYLSVVRENVSLKAELHAVRDAAKRELAALSAQFDLALSALRREVINARERW
TIDAYALMDAQLYIQALEDTCHHHQIPLPKKPRRAGLDRPTTSPRTDDQHTGLDPIDELLSPLGQGASV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16491; Mature: 16491

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLIGAVVWLIGLTIVVMVGAWMFARGYLSVVRENVSLKAELHAVRDAAKRELAALSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QFDLALSALRREVINARERWTIDAYALMDAQLYIQALEDTCHHHQIPLPKKPRRAGLDRP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TTSPRTDDQHTGLDPIDELLSPLGQGASV
CCCCCCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSLLIGAVVWLIGLTIVVMVGAWMFARGYLSVVRENVSLKAELHAVRDAAKRELAALSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QFDLALSALRREVINARERWTIDAYALMDAQLYIQALEDTCHHHQIPLPKKPRRAGLDRP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TTSPRTDDQHTGLDPIDELLSPLGQGASV
CCCCCCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA