| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897900
Identifier: 159897900
GI number: 159897900
Start: 1591303
End: 1591728
Strand: Reverse
Name: 159897900
Synonym: Haur_1374
Alternate gene names: NA
Gene position: 1591728-1591303 (Counterclockwise)
Preceding gene: 159897901
Following gene: 159897899
Centisome position: 25.08
GC content: 58.45
Gene sequence:
>426_bases ATGGCGAAGAAAGGCGTAGCCCAGTACCAATCCTTTGCCAAGCGCTTTCGCGTGCGCATTGATGGCGCAACCCGCGACCT GCTGAACGAGGCGGCGCTGGCAGGTGAAGGGCATGCCAAACAAAATATGGTGGCCAATAACAGCATTGATACCGGCTTTG CCTTGAATAGCATCCATGCCGTATTGGTCGATGGGCAAGGGGTCGATGCGGCCACGACCGATCTGCCAGATAAGCACGGC GATGTGGTGCAGCGTACATCCGCTGGATTGCCTGCCATGGGCGACAACACCAGCGCGGTCGGCTGCGCAGCCACCTATGC GATCTACATCGAACTGCGAGCACCCTTTTTGTTTCCCGCGCTCGATCAGGTCAAGGCCGATTTTGGCAGCATCGTGCAGG TCGTGCGCCGCAAGCGAGGCTTGTAA
Upstream 100 bases:
>100_bases GACCAGTCCATTGGCATTCGACATAGTGGGCGATCCATCTACCGTTGGCACGGCCATCGTAGTGGAGCTGGCCACCGTCA CCCGCGAGGAGGTCTAAGTC
Downstream 100 bases:
>100_bases TGGTTGACCTGATTGCTGCCATCATCACCGCCATGAGCACACCTGCCGTGACCGCACTGGTAAGCAATCGGGTGTGGGTG GGGCCGGATTTGCCGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAKKGVAQYQSFAKRFRVRIDGATRDLLNEAALAGEGHAKQNMVANNSIDTGFALNSIHAVLVDGQGVDAATTDLPDKHG DVVQRTSAGLPAMGDNTSAVGCAATYAIYIELRAPFLFPALDQVKADFGSIVQVVRRKRGL
Sequences:
>Translated_141_residues MAKKGVAQYQSFAKRFRVRIDGATRDLLNEAALAGEGHAKQNMVANNSIDTGFALNSIHAVLVDGQGVDAATTDLPDKHG DVVQRTSAGLPAMGDNTSAVGCAATYAIYIELRAPFLFPALDQVKADFGSIVQVVRRKRGL >Mature_140_residues AKKGVAQYQSFAKRFRVRIDGATRDLLNEAALAGEGHAKQNMVANNSIDTGFALNSIHAVLVDGQGVDAATTDLPDKHGD VVQRTSAGLPAMGDNTSAVGCAATYAIYIELRAPFLFPALDQVKADFGSIVQVVRRKRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14973; Mature: 14842
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKGVAQYQSFAKRFRVRIDGATRDLLNEAALAGEGHAKQNMVANNSIDTGFALNSIHA CCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEECCCEEE VLVDGQGVDAATTDLPDKHGDVVQRTSAGLPAMGDNTSAVGCAATYAIYIELRAPFLFPA EEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHEEEEEEEEECCCCHHHH LDQVKADFGSIVQVVRRKRGL HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKKGVAQYQSFAKRFRVRIDGATRDLLNEAALAGEGHAKQNMVANNSIDTGFALNSIHA CCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEECCCEEE VLVDGQGVDAATTDLPDKHGDVVQRTSAGLPAMGDNTSAVGCAATYAIYIELRAPFLFPA EEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHEEEEEEEEECCCCHHHH LDQVKADFGSIVQVVRRKRGL HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA