| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897898
Identifier: 159897898
GI number: 159897898
Start: 1590278
End: 1590874
Strand: Reverse
Name: 159897898
Synonym: Haur_1372
Alternate gene names: NA
Gene position: 1590874-1590278 (Counterclockwise)
Preceding gene: 159897899
Following gene: 159897897
Centisome position: 25.07
GC content: 57.12
Gene sequence:
>597_bases ATGCCAACCGATGTTGCTGCTGTAACGATGAGTAATGCCACGTTGTTCTATGCGCCTGTGGGCACAACCCTGCCTGCTGA TAGCCTGGCCGTTGGGGCCGCGTGGCCCGTAGGTTGGGTACAGTACGGCTTGACCAGTGCCCCACTGGTGGTGGCCTATA GCTACGAAACCAAAGCACCCGAAATCCAAGAAGCCTTGGGCGCAGTCAAGCGCAAAAAGGTCAGCGAAGAATTAACCGCC GAAACGACCATGGCCCAGCTCGATTTCGCCGGATTGCCCAGTACATGGGGTGGAACCAATACCGTGGTGGCCTCGGGCGT GGGCCAAGTCGGCAAAGAAACCTTCAAAATTGGTGGCGCGGCCCAGTTACCCATCCGCATGTGGGGCTTTGAAGCCGAAC AAGAGGACGAGGAGGGCAATGTCTTTCCGGTGCGCGGCTTTATTTGGAAAGCCACAGCGGAAGAAGGCGGCGAGTTGGAA TTTAGCAAAGAAGATTGGACGGGTCTCCCGCTGAAGCTGTCCGCCTTGGAAGACTTATCGCGCACCAAGGGCGAGCGGTT ATTTCAATTAGTCCGCGTGGTTGAGGCCGCGTCCTAA
Upstream 100 bases:
>100_bases AACAACCTTGTGGCTGTTCGCCTTGTCGGGCTGGACGGCCCATATCAAGAATTATTAGATCAAATCGATTTCGACCGATT TCACTACAAAGGAGGTTGGA
Downstream 100 bases:
>100_bases GGGGTTGAGAGCGCGAGAAGGTTTGGTTTGATTAACATTTGCAAAGGATACACACCCATGGCTGTCATGCTTTCCCTGAC CATCGGCGGCGAGGTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPTDVAAVTMSNATLFYAPVGTTLPADSLAVGAAWPVGWVQYGLTSAPLVVAYSYETKAPEIQEALGAVKRKKVSEELTA ETTMAQLDFAGLPSTWGGTNTVVASGVGQVGKETFKIGGAAQLPIRMWGFEAEQEDEEGNVFPVRGFIWKATAEEGGELE FSKEDWTGLPLKLSALEDLSRTKGERLFQLVRVVEAAS
Sequences:
>Translated_198_residues MPTDVAAVTMSNATLFYAPVGTTLPADSLAVGAAWPVGWVQYGLTSAPLVVAYSYETKAPEIQEALGAVKRKKVSEELTA ETTMAQLDFAGLPSTWGGTNTVVASGVGQVGKETFKIGGAAQLPIRMWGFEAEQEDEEGNVFPVRGFIWKATAEEGGELE FSKEDWTGLPLKLSALEDLSRTKGERLFQLVRVVEAAS >Mature_197_residues PTDVAAVTMSNATLFYAPVGTTLPADSLAVGAAWPVGWVQYGLTSAPLVVAYSYETKAPEIQEALGAVKRKKVSEELTAE TTMAQLDFAGLPSTWGGTNTVVASGVGQVGKETFKIGGAAQLPIRMWGFEAEQEDEEGNVFPVRGFIWKATAEEGGELEF SKEDWTGLPLKLSALEDLSRTKGERLFQLVRVVEAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21160; Mature: 21029
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDVAAVTMSNATLFYAPVGTTLPADSLAVGAAWPVGWVQYGLTSAPLVVAYSYETKAP CCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCCCCEEEEEECCCCCC EIQEALGAVKRKKVSEELTAETTMAQLDFAGLPSTWGGTNTVVASGVGQVGKETFKIGGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHCHHHEECCCC AQLPIRMWGFEAEQEDEEGNVFPVRGFIWKATAEEGGELEFSKEDWTGLPLKLSALEDLS EECCEEEECCCCCCCCCCCCEEEECCEEEEECCCCCCCEEECCCCCCCCCEEHHHHHHHH RTKGERLFQLVRVVEAAS HHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTDVAAVTMSNATLFYAPVGTTLPADSLAVGAAWPVGWVQYGLTSAPLVVAYSYETKAP CCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCCCCEEEEEECCCCCC EIQEALGAVKRKKVSEELTAETTMAQLDFAGLPSTWGGTNTVVASGVGQVGKETFKIGGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHCHHHEECCCC AQLPIRMWGFEAEQEDEEGNVFPVRGFIWKATAEEGGELEFSKEDWTGLPLKLSALEDLS EECCEEEECCCCCCCCCCCCEEEECCEEEEECCCCCCCEEECCCCCCCCCEEHHHHHHHH RTKGERLFQLVRVVEAAS HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA