Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897892

Identifier: 159897892

GI number: 159897892

Start: 1580328

End: 1581278

Strand: Reverse

Name: 159897892

Synonym: Haur_1366

Alternate gene names: NA

Gene position: 1581278-1580328 (Counterclockwise)

Preceding gene: 159897893

Following gene: 159897888

Centisome position: 24.92

GC content: 39.01

Gene sequence:

>951_bases
ATGGAAGATCTCAATATCAACGAAAATGAATCCGTAATGGGTATAGGAGTACGATGGACGAAAACCTCTCATGAAACTCA
TAAACAAGAAGAGTCAGTGATCGACATACCAGAGAGCATTCGTGCAAATTTAAGAAACCTCCATGCCCTCTATCTTTATG
GGCTTCCGGCCAAGCTCGATGGCAACAATAAGGTTATCCGCAAATCAATAACATACCAAAAGTCTTGGCCTAGTGCATGG
CACGTATTTGATGATGAAATGAAAAACCGTATTAAAACCGTTGGAATAGCTCTGGAAATAGACAGCCAGTTTATGCTTAT
CAATTGTAACCTTGAGGGATTTGGGCGATTTTTGTACCCAGAAACCCAGATTGATACATTATTTAATCAGTGGGTAGATA
TAGGTGTTTATGATTTTTTGAATCTATCAGATTTGCAGAGGTATAAAAACCGAAGAAAGAAATTAGGGGCCAATGTAAAT
ATAATCAGTATGAGCCAAGTTAATATTGGCATATTACGAGCATGGACGTATCTAGAAAACTGTATTATAAGAATCACATC
ATCCTGGGAGCGACTTACAAAATATGCGCTTCCCGCATACTTTGGTCTGATACCTCCTAAAAAAGATAGTGAATGGAAAA
CATTATTTGATGAAAGTATCCCTACAAAGATTAAAGGGAATGATAACCAATGCTATTTTTTTGACGCGTTCAATAAGATA
CGCATAGCTTATATAGGCAAGACCAGTGAACTGAAAGTATTGCGAAATGCCTTGATACATGAGTTATCGCCACGACCCAT
AGGAGCCATATCAACATCCGCGAATCAACCGCACACATTAGACGGATTACACAAGCTCGTTGTAGTCGAGCATGACAAGT
TTCGTGAAGCGCTCTTATTGTTTGCAGGCATCATTCGGAGTAAGACATCCGAAAACCAATTCGTTGACTAG

Upstream 100 bases:

>100_bases
ATGTATTGGTTCATGCAGCCTAGTAGGTCAAGCGAAGATGTCATATATTTATCATTAACGCCGCATTGTTGTTCTGACAG
GATAATGCTGGGAGGGCATC

Downstream 100 bases:

>100_bases
CCTATGACACTCAAGCTGCTTAAGCAACCGTGTGCGCCCTCGTAGCGCAAGTTGGGTGAAAGCCACCGATCAGCCTTGAC
AGTGCCAATCGGCGGCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLDGNNKVIRKSITYQKSWPSAW
HVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYPETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVN
IISMSQVNIGILRAWTYLENCIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI
RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLLFAGIIRSKTSENQFVD

Sequences:

>Translated_316_residues
MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLDGNNKVIRKSITYQKSWPSAW
HVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYPETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVN
IISMSQVNIGILRAWTYLENCIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI
RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLLFAGIIRSKTSENQFVD
>Mature_316_residues
MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLDGNNKVIRKSITYQKSWPSAW
HVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYPETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVN
IISMSQVNIGILRAWTYLENCIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI
RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLLFAGIIRSKTSENQFVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36468; Mature: 36468

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLD
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHCHHCCCCHHHHHHHHHEEEEEEEECCEEEC
GNNKVIRKSITYQKSWPSAWHVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYP
CCCCEEEEECCCCCCCCCHHCEEHHHHHHHHEEEEEEEEECCEEEEEEECHHHCCCCCCC
ETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVNIISMSQVNIGILRAWTYLEN
CHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
CIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI
HHEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEEEECCCEE
RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLL
EEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCEEEEEEECHHHHHHHHH
FAGIIRSKTSENQFVD
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLD
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHCHHCCCCHHHHHHHHHEEEEEEEECCEEEC
GNNKVIRKSITYQKSWPSAWHVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYP
CCCCEEEEECCCCCCCCCHHCEEHHHHHHHHEEEEEEEEECCEEEEEEECHHHCCCCCCC
ETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVNIISMSQVNIGILRAWTYLEN
CHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
CIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI
HHEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEEEECCCEE
RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLL
EEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCEEEEEEECHHHHHHHHH
FAGIIRSKTSENQFVD
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA