| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897892
Identifier: 159897892
GI number: 159897892
Start: 1580328
End: 1581278
Strand: Reverse
Name: 159897892
Synonym: Haur_1366
Alternate gene names: NA
Gene position: 1581278-1580328 (Counterclockwise)
Preceding gene: 159897893
Following gene: 159897888
Centisome position: 24.92
GC content: 39.01
Gene sequence:
>951_bases ATGGAAGATCTCAATATCAACGAAAATGAATCCGTAATGGGTATAGGAGTACGATGGACGAAAACCTCTCATGAAACTCA TAAACAAGAAGAGTCAGTGATCGACATACCAGAGAGCATTCGTGCAAATTTAAGAAACCTCCATGCCCTCTATCTTTATG GGCTTCCGGCCAAGCTCGATGGCAACAATAAGGTTATCCGCAAATCAATAACATACCAAAAGTCTTGGCCTAGTGCATGG CACGTATTTGATGATGAAATGAAAAACCGTATTAAAACCGTTGGAATAGCTCTGGAAATAGACAGCCAGTTTATGCTTAT CAATTGTAACCTTGAGGGATTTGGGCGATTTTTGTACCCAGAAACCCAGATTGATACATTATTTAATCAGTGGGTAGATA TAGGTGTTTATGATTTTTTGAATCTATCAGATTTGCAGAGGTATAAAAACCGAAGAAAGAAATTAGGGGCCAATGTAAAT ATAATCAGTATGAGCCAAGTTAATATTGGCATATTACGAGCATGGACGTATCTAGAAAACTGTATTATAAGAATCACATC ATCCTGGGAGCGACTTACAAAATATGCGCTTCCCGCATACTTTGGTCTGATACCTCCTAAAAAAGATAGTGAATGGAAAA CATTATTTGATGAAAGTATCCCTACAAAGATTAAAGGGAATGATAACCAATGCTATTTTTTTGACGCGTTCAATAAGATA CGCATAGCTTATATAGGCAAGACCAGTGAACTGAAAGTATTGCGAAATGCCTTGATACATGAGTTATCGCCACGACCCAT AGGAGCCATATCAACATCCGCGAATCAACCGCACACATTAGACGGATTACACAAGCTCGTTGTAGTCGAGCATGACAAGT TTCGTGAAGCGCTCTTATTGTTTGCAGGCATCATTCGGAGTAAGACATCCGAAAACCAATTCGTTGACTAG
Upstream 100 bases:
>100_bases ATGTATTGGTTCATGCAGCCTAGTAGGTCAAGCGAAGATGTCATATATTTATCATTAACGCCGCATTGTTGTTCTGACAG GATAATGCTGGGAGGGCATC
Downstream 100 bases:
>100_bases CCTATGACACTCAAGCTGCTTAAGCAACCGTGTGCGCCCTCGTAGCGCAAGTTGGGTGAAAGCCACCGATCAGCCTTGAC AGTGCCAATCGGCGGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLDGNNKVIRKSITYQKSWPSAW HVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYPETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVN IISMSQVNIGILRAWTYLENCIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLLFAGIIRSKTSENQFVD
Sequences:
>Translated_316_residues MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLDGNNKVIRKSITYQKSWPSAW HVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYPETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVN IISMSQVNIGILRAWTYLENCIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLLFAGIIRSKTSENQFVD >Mature_316_residues MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLDGNNKVIRKSITYQKSWPSAW HVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYPETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVN IISMSQVNIGILRAWTYLENCIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLLFAGIIRSKTSENQFVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36468; Mature: 36468
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLD CCCCCCCCCCCEEEEEEEEECCCCHHHHHHCHHCCCCHHHHHHHHHEEEEEEEECCEEEC GNNKVIRKSITYQKSWPSAWHVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYP CCCCEEEEECCCCCCCCCHHCEEHHHHHHHHEEEEEEEEECCEEEEEEECHHHCCCCCCC ETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVNIISMSQVNIGILRAWTYLEN CHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH CIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI HHEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEEEECCCEE RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLL EEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCEEEEEEECHHHHHHHHH FAGIIRSKTSENQFVD HHHHHHCCCCCCCCCC >Mature Secondary Structure MEDLNINENESVMGIGVRWTKTSHETHKQEESVIDIPESIRANLRNLHALYLYGLPAKLD CCCCCCCCCCCEEEEEEEEECCCCHHHHHHCHHCCCCHHHHHHHHHEEEEEEEECCEEEC GNNKVIRKSITYQKSWPSAWHVFDDEMKNRIKTVGIALEIDSQFMLINCNLEGFGRFLYP CCCCEEEEECCCCCCCCCHHCEEHHHHHHHHEEEEEEEEECCEEEEEEECHHHCCCCCCC ETQIDTLFNQWVDIGVYDFLNLSDLQRYKNRRKKLGANVNIISMSQVNIGILRAWTYLEN CHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH CIIRITSSWERLTKYALPAYFGLIPPKKDSEWKTLFDESIPTKIKGNDNQCYFFDAFNKI HHEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEEEECCCEE RIAYIGKTSELKVLRNALIHELSPRPIGAISTSANQPHTLDGLHKLVVVEHDKFREALLL EEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHCCEEEEEEECHHHHHHHHH FAGIIRSKTSENQFVD HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA