Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897828

Identifier: 159897828

GI number: 159897828

Start: 1507179

End: 1508441

Strand: Direct

Name: 159897828

Synonym: Haur_1299

Alternate gene names: NA

Gene position: 1507179-1508441 (Clockwise)

Preceding gene: 159897827

Following gene: 159897829

Centisome position: 23.75

GC content: 51.78

Gene sequence:

>1263_bases
ATGATGGCGCGGCATAGTAAATTATTTTGGCTTAGCGGCTTGGTAGCCTTGTTGCTGGCGACGATTGTGCATCTGGCTTT
GACGGCGGCTGGCCCACAGCGCTGGGATGCTTGGGTGCATCTGCTGCTGTATGGCTGGATCAGCTGTAGTATTTTTGCGG
TGAATTACCACACAACTCCGGTATTCAGTGGCCGCAATTTCCCCAAACCAGCGTGGTTGGAGTTGCATTGGTTGGTTTGG
AGTTTGGGTGTCGTGCTGGCCAGCAGTGGCTTGGTTTGGTATAGCCAACTCAGTTATCGCTTAGGCTTGGGTTTGGAGTG
GCTGGGCAGTTGGTTGTTTATGTGGAATATTATGCAACTGTTGCGTAGCCCTAAATTGCGCCCAAGCATGCCATCATCAC
CCTTGCAACAACAGATTGATCGACTCTCGACCCTCGCCACGAAAACCTCTGGAGCCAGTTTACCCCTAGCGCTGAGCTTA
ATTCTTGCTCGTGAATTTGGCTTGATTCATTCCCGTTGGCTTTTGAGCGCTGAGCATTTATTGACCCTTGGTTGGATGAT
GTTGATGATTATTGGCGTAGCCTGCCATGTCTTGCCGCGTTGGTCAGGCCAAGCAACCCGTGATCCGCGTTGGCTAAAAG
TGGGCTTGAGCTTGCATCATCTTGGTTTGCTGAGCATTGTGCTTGGCTTGGGCGTTGATCTGCCTGCCCTCTTTGCGCTT
GGAGCCAGTTTCATTTTAGTGGCCTTAGCGTGTTGTGTTTGGCTGTTGATTCCGGCCTTGGCTACTCCGCCTGTCAAGCA
ACCAAGCCAATTGAGCATTGTGCAGCCGCGCCGCATCGGCCCCTTGACCATGTGGTCGATTCGCGCGGCAGTCTTTTATT
TGGCAGTTGGGATTGGCTTGGGCATTAGTTTTGCCTTTGATCGGGCTTTGGGTGCGCAACTTCGCCCAATCCATGTTGAA
TCGAATTTAGCGGGCTTTGCGACGATCCTGATTTATGGAATGGCCTATTTTATGATTCCACGCTTTATGGGGCGACCGTT
GGGCTTGGCCAATATTGCTAATTGGCAGGTGTTTTTGGCGATTAGCGCGGTAGCCATTATTGATCTTGGGTGGGCTGGAT
TAGTGGCTGGCTTGGCTTGGGCACGCTGGTTGCTGGTGTTTGGGGCTAGTATCCATGGCTTGGCGGCACTGCTATTTAGT
TTGAGCATGCTAGCGACGATCTATCAGCCTGTGCCATTGCGGCGTTTGGCGCATAAATCTTAA

Upstream 100 bases:

>100_bases
TCCCACAATCACCAAGCATAATGCCATGTGAGAAATATCGCTGTGCAGATCGATCAATCTCCGTAAACTAGCCTTAGATT
GGCTCGTTGATGGAGTGATA

Downstream 100 bases:

>100_bases
CTCAGCTTTAATTCTTGGGCTGGCGTTGTAGCGTATAGTGGGGCTGTGTTGAATTGAGGGTTGTGCAAGAGTTCTGTGCA
TTGCCCCAACTAGAAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MMARHSKLFWLSGLVALLLATIVHLALTAAGPQRWDAWVHLLLYGWISCSIFAVNYHTTPVFSGRNFPKPAWLELHWLVW
SLGVVLASSGLVWYSQLSYRLGLGLEWLGSWLFMWNIMQLLRSPKLRPSMPSSPLQQQIDRLSTLATKTSGASLPLALSL
ILAREFGLIHSRWLLSAEHLLTLGWMMLMIIGVACHVLPRWSGQATRDPRWLKVGLSLHHLGLLSIVLGLGVDLPALFAL
GASFILVALACCVWLLIPALATPPVKQPSQLSIVQPRRIGPLTMWSIRAAVFYLAVGIGLGISFAFDRALGAQLRPIHVE
SNLAGFATILIYGMAYFMIPRFMGRPLGLANIANWQVFLAISAVAIIDLGWAGLVAGLAWARWLLVFGASIHGLAALLFS
LSMLATIYQPVPLRRLAHKS

Sequences:

>Translated_420_residues
MMARHSKLFWLSGLVALLLATIVHLALTAAGPQRWDAWVHLLLYGWISCSIFAVNYHTTPVFSGRNFPKPAWLELHWLVW
SLGVVLASSGLVWYSQLSYRLGLGLEWLGSWLFMWNIMQLLRSPKLRPSMPSSPLQQQIDRLSTLATKTSGASLPLALSL
ILAREFGLIHSRWLLSAEHLLTLGWMMLMIIGVACHVLPRWSGQATRDPRWLKVGLSLHHLGLLSIVLGLGVDLPALFAL
GASFILVALACCVWLLIPALATPPVKQPSQLSIVQPRRIGPLTMWSIRAAVFYLAVGIGLGISFAFDRALGAQLRPIHVE
SNLAGFATILIYGMAYFMIPRFMGRPLGLANIANWQVFLAISAVAIIDLGWAGLVAGLAWARWLLVFGASIHGLAALLFS
LSMLATIYQPVPLRRLAHKS
>Mature_420_residues
MMARHSKLFWLSGLVALLLATIVHLALTAAGPQRWDAWVHLLLYGWISCSIFAVNYHTTPVFSGRNFPKPAWLELHWLVW
SLGVVLASSGLVWYSQLSYRLGLGLEWLGSWLFMWNIMQLLRSPKLRPSMPSSPLQQQIDRLSTLATKTSGASLPLALSL
ILAREFGLIHSRWLLSAEHLLTLGWMMLMIIGVACHVLPRWSGQATRDPRWLKVGLSLHHLGLLSIVLGLGVDLPALFAL
GASFILVALACCVWLLIPALATPPVKQPSQLSIVQPRRIGPLTMWSIRAAVFYLAVGIGLGISFAFDRALGAQLRPIHVE
SNLAGFATILIYGMAYFMIPRFMGRPLGLANIANWQVFLAISAVAIIDLGWAGLVAGLAWARWLLVFGASIHGLAALLFS
LSMLATIYQPVPLRRLAHKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46275; Mature: 46275

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMARHSKLFWLSGLVALLLATIVHLALTAAGPQRWDAWVHLLLYGWISCSIFAVNYHTTP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCC
VFSGRNFPKPAWLELHWLVWSLGVVLASSGLVWYSQLSYRLGLGLEWLGSWLFMWNIMQL
EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRSPKLRPSMPSSPLQQQIDRLSTLATKTSGASLPLALSLILAREFGLIHSRWLLSAEHL
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGWMMLMIIGVACHVLPRWSGQATRDPRWLKVGLSLHHLGLLSIVLGLGVDLPALFAL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHH
GASFILVALACCVWLLIPALATPPVKQPSQLSIVQPRRIGPLTMWSIRAAVFYLAVGIGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GISFAFDRALGAQLRPIHVESNLAGFATILIYGMAYFMIPRFMGRPLGLANIANWQVFLA
HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHH
ISAVAIIDLGWAGLVAGLAWARWLLVFGASIHGLAALLFSLSMLATIYQPVPLRRLAHKS
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MMARHSKLFWLSGLVALLLATIVHLALTAAGPQRWDAWVHLLLYGWISCSIFAVNYHTTP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCC
VFSGRNFPKPAWLELHWLVWSLGVVLASSGLVWYSQLSYRLGLGLEWLGSWLFMWNIMQL
EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRSPKLRPSMPSSPLQQQIDRLSTLATKTSGASLPLALSLILAREFGLIHSRWLLSAEHL
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGWMMLMIIGVACHVLPRWSGQATRDPRWLKVGLSLHHLGLLSIVLGLGVDLPALFAL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHH
GASFILVALACCVWLLIPALATPPVKQPSQLSIVQPRRIGPLTMWSIRAAVFYLAVGIGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GISFAFDRALGAQLRPIHVESNLAGFATILIYGMAYFMIPRFMGRPLGLANIANWQVFLA
HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHH
ISAVAIIDLGWAGLVAGLAWARWLLVFGASIHGLAALLFSLSMLATIYQPVPLRRLAHKS
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA