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The map label for this gene is hycF [C]

Identifier: 159897825

GI number: 159897825

Start: 1505785

End: 1506039

Strand: Direct

Name: hycF [C]

Synonym: Haur_1296

Alternate gene names: 159897825

Gene position: 1505785-1506039 (Clockwise)

Preceding gene: 159897824

Following gene: 159897827

Centisome position: 23.73

GC content: 49.8

Gene sequence:

>255_bases
ATGGTATTACCTGTGATTAATTTGCAACGTTGTATTGCCTGTGGTGCCTGTGAACATGTTTGCCCAACTGCCGCAGTGGC
AATTGAGCAACAGCATGCGGTCTTAGTCAAACCCGAAGCCTGTACCTTTTGCGATCGCTGCGAAATTGCCTGCCCAACCG
AAGCGATTAGCCGTTCGTTTGCAATTCGCTTTGCCCCAAGCAGCCAGCCATTAACTAAAGCTCAGCTTGGGCAGCTAAAC
CTTGGGGATCGATAA

Upstream 100 bases:

>100_bases
CGGGATTAGTGGTTCACAACGGAAAACGATTAAAAACCTATCCTTGAGGGACTGGGTGAGGGAACGAATGAACTGTTACA
GCTACTGATCGGAGTTGGTG

Downstream 100 bases:

>100_bases
TTTCGATTATGCCGCGCTCAAGCCGAATTAAGCCTTGGGCATCAAAGGCCTTCAAGGCTCGCCCGACCATCTCACGCACT
GAGCCAATATGCGCGGCCAT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MVLPVINLQRCIACGACEHVCPTAAVAIEQQHAVLVKPEACTFCDRCEIACPTEAISRSFAIRFAPSSQPLTKAQLGQLN
LGDR

Sequences:

>Translated_84_residues
MVLPVINLQRCIACGACEHVCPTAAVAIEQQHAVLVKPEACTFCDRCEIACPTEAISRSFAIRFAPSSQPLTKAQLGQLN
LGDR
>Mature_84_residues
MVLPVINLQRCIACGACEHVCPTAAVAIEQQHAVLVKPEACTFCDRCEIACPTEAISRSFAIRFAPSSQPLTKAQLGQLN
LGDR

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9026; Mature: 9026

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
9.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPVINLQRCIACGACEHVCPTAAVAIEQQHAVLVKPEACTFCDRCEIACPTEAISRSF
CCCCCCCHHHHHHCCCCCCCCCCHHEEECCCCEEEECCCCCCCCCCCCCCCCHHHHCCEE
AIRFAPSSQPLTKAQLGQLNLGDR
EEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLPVINLQRCIACGACEHVCPTAAVAIEQQHAVLVKPEACTFCDRCEIACPTEAISRSF
CCCCCCCHHHHHHCCCCCCCCCCHHEEECCCCEEEECCCCCCCCCCCCCCCCHHHHCCEE
AIRFAPSSQPLTKAQLGQLNLGDR
EEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA