Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897804

Identifier: 159897804

GI number: 159897804

Start: 1484680

End: 1485990

Strand: Reverse

Name: 159897804

Synonym: Haur_1275

Alternate gene names: NA

Gene position: 1485990-1484680 (Counterclockwise)

Preceding gene: 159897805

Following gene: 159897800

Centisome position: 23.41

GC content: 51.95

Gene sequence:

>1311_bases
ATGGCCGCACCAATCGTTCAAGCTGATTTTGAAGTAATGGATCAAGTTGCCCAGCGCCTTAGCAAAAATGCTGAGAGTGT
TACGGCAATGCAAAATACGCTCAAACAAACTATTGAAGACTTACGCTCAACATGGTTGGGTGATGCTGCGGTTGCATTTC
AAAAAGAAATGCAGGCTGATATTTTGCCTGCAGTGCAACGGCTGATCAACGCTTTCCAAACCGCCCAAAGTACAACCTTA
GAAATTAAGAAAGTTTTACAAGAAGCCGAGCAAGAGGCCGCCAATCTATTTAAAGGCGATCCAACTGGTGGCTCAGCCAG
CACCCAAAGCGCTAGTTCAAGCGCTGGTGGCGGTGGAGCCTCAAGTGCTGGTGGCGATACTGCGGCAGCCAGTGCTAGCC
CAAGTAATGTTGGCGTAATGGCTGGTGGCACCAGCAGCGCTTCTGCCAGTGGCAGTGGCGGCGGCGGTGGTGGCGGTGGC
GGTGCAGCCTCGGCTCAAGCAAGTGGCGGCGGCGGTGGTGGTGGTGGCGGAGCAGCCTCAGCTCAACCAACTGGCCAACA
ACCCAAGGCTACCAGTGGTGGCGGCGGTGGCGGTGGTGGTGGTGGCGGAACAGCCTCAGCCCAACCAACTGGTGGTAATG
CAGCCGCTGCAGGTAATGCAAGCCTTGGTAAACTCTCTGAAAAATACGAAACTGGTGGCCGTGGCCCAGGCACGGTTTCA
TCAGGCAAAGGCGACCTTGGCGGCGCTTCATATGGCTCATACCAAATGACCAGCCAAACTGCCATCAAAAAAGATGGCAA
AATTGTCTTTGTTAATGGCGGACGGGTCGCTGAATTTTTACGCAACCCTGCTGGTGCACAATATGCTGAAGAATTTAAGG
GCTTGAAACCAGGGAGCGCTGAATTTACCGCCAAGTGGAAGCAAATTGCTGCTCGCGATCCACAAGGCTTTGCTGCTGCC
CAACATCAGTATATTGAAAACACCCACTATCAGCCTCAAGTCAACAAGCTCAAGGCAGCTGGCTTTGATGTAAACAACTA
TTCGCCAGCAATGCGCGATGTTGTTTGGTCAACCTCAGTTCAACATGGCCCAGGCGCAAGCGTGATCACCAATGCGCTCC
GTGGCAAAGATCTTAGCCAAATGAGCGAATCGCAAATTATCAATGCGATTTACACCGAACGTAGCAAAACCCTCGATAAT
GGGCGCTTGGCCTATTTCAAAAATACCAGCGATGCTGGGGTTATTCAAGGCTTGAAAAACCGCTTCGTCAACGAACGCAA
AGATGCCTTGAACATGTCGGCAAATCACTAG

Upstream 100 bases:

>100_bases
CTACCATGACTCCCCAGAGCAGGATACGGTTAAGATTTTGGCAATAGCCTACCGTCGAGGGCTATTACCACCCTTTTAGC
ACGCTAGTGTTGGAGGATTC

Downstream 100 bases:

>100_bases
ATCCCGGTCTTTTTTTACAAACGCCCCGCACGATCAAACGATCGGCGGGGCGTTTGCTTGGTTAAGCTGGTTGCTTATGG
AATGATATACCAAACATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MAAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQADILPAVQRLINAFQTAQSTTL
EIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGASSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGG
GAASAQASGGGGGGGGGAASAQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS
SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSAEFTAKWKQIAARDPQGFAAA
QHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSVQHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDN
GRLAYFKNTSDAGVIQGLKNRFVNERKDALNMSANH

Sequences:

>Translated_436_residues
MAAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQADILPAVQRLINAFQTAQSTTL
EIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGASSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGG
GAASAQASGGGGGGGGGAASAQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS
SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSAEFTAKWKQIAARDPQGFAAA
QHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSVQHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDN
GRLAYFKNTSDAGVIQGLKNRFVNERKDALNMSANH
>Mature_435_residues
AAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQADILPAVQRLINAFQTAQSTTLE
IKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGASSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGGG
AASAQASGGGGGGGGGAASAQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVSS
GKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSAEFTAKWKQIAARDPQGFAAAQ
HQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSVQHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDNG
RLAYFKNTSDAGVIQGLKNRFVNERKDALNMSANH

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43698; Mature: 43567

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQAD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ILPAVQRLINAFQTAQSTTLEIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGGGAASAQASGGGGGGGGGAAS
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSA
CCCCCCCCCCCCCEECHHHHHHCCCCEEEEEECCHHHHHHHCCCCHHHHHHHCCCCCCCH
EFTAKWKQIAARDPQGFAAAQHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSV
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC
QHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDNGRLAYFKNTSDAGVIQGLKN
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
RFVNERKDALNMSANH
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQAD
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ILPAVQRLINAFQTAQSTTLEIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGGGAASAQASGGGGGGGGGAAS
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSA
CCCCCCCCCCCCCEECHHHHHHCCCCEEEEEECCHHHHHHHCCCCHHHHHHHCCCCCCCH
EFTAKWKQIAARDPQGFAAAQHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSV
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC
QHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDNGRLAYFKNTSDAGVIQGLKN
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
RFVNERKDALNMSANH
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA