| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897804
Identifier: 159897804
GI number: 159897804
Start: 1484680
End: 1485990
Strand: Reverse
Name: 159897804
Synonym: Haur_1275
Alternate gene names: NA
Gene position: 1485990-1484680 (Counterclockwise)
Preceding gene: 159897805
Following gene: 159897800
Centisome position: 23.41
GC content: 51.95
Gene sequence:
>1311_bases ATGGCCGCACCAATCGTTCAAGCTGATTTTGAAGTAATGGATCAAGTTGCCCAGCGCCTTAGCAAAAATGCTGAGAGTGT TACGGCAATGCAAAATACGCTCAAACAAACTATTGAAGACTTACGCTCAACATGGTTGGGTGATGCTGCGGTTGCATTTC AAAAAGAAATGCAGGCTGATATTTTGCCTGCAGTGCAACGGCTGATCAACGCTTTCCAAACCGCCCAAAGTACAACCTTA GAAATTAAGAAAGTTTTACAAGAAGCCGAGCAAGAGGCCGCCAATCTATTTAAAGGCGATCCAACTGGTGGCTCAGCCAG CACCCAAAGCGCTAGTTCAAGCGCTGGTGGCGGTGGAGCCTCAAGTGCTGGTGGCGATACTGCGGCAGCCAGTGCTAGCC CAAGTAATGTTGGCGTAATGGCTGGTGGCACCAGCAGCGCTTCTGCCAGTGGCAGTGGCGGCGGCGGTGGTGGCGGTGGC GGTGCAGCCTCGGCTCAAGCAAGTGGCGGCGGCGGTGGTGGTGGTGGCGGAGCAGCCTCAGCTCAACCAACTGGCCAACA ACCCAAGGCTACCAGTGGTGGCGGCGGTGGCGGTGGTGGTGGTGGCGGAACAGCCTCAGCCCAACCAACTGGTGGTAATG CAGCCGCTGCAGGTAATGCAAGCCTTGGTAAACTCTCTGAAAAATACGAAACTGGTGGCCGTGGCCCAGGCACGGTTTCA TCAGGCAAAGGCGACCTTGGCGGCGCTTCATATGGCTCATACCAAATGACCAGCCAAACTGCCATCAAAAAAGATGGCAA AATTGTCTTTGTTAATGGCGGACGGGTCGCTGAATTTTTACGCAACCCTGCTGGTGCACAATATGCTGAAGAATTTAAGG GCTTGAAACCAGGGAGCGCTGAATTTACCGCCAAGTGGAAGCAAATTGCTGCTCGCGATCCACAAGGCTTTGCTGCTGCC CAACATCAGTATATTGAAAACACCCACTATCAGCCTCAAGTCAACAAGCTCAAGGCAGCTGGCTTTGATGTAAACAACTA TTCGCCAGCAATGCGCGATGTTGTTTGGTCAACCTCAGTTCAACATGGCCCAGGCGCAAGCGTGATCACCAATGCGCTCC GTGGCAAAGATCTTAGCCAAATGAGCGAATCGCAAATTATCAATGCGATTTACACCGAACGTAGCAAAACCCTCGATAAT GGGCGCTTGGCCTATTTCAAAAATACCAGCGATGCTGGGGTTATTCAAGGCTTGAAAAACCGCTTCGTCAACGAACGCAA AGATGCCTTGAACATGTCGGCAAATCACTAG
Upstream 100 bases:
>100_bases CTACCATGACTCCCCAGAGCAGGATACGGTTAAGATTTTGGCAATAGCCTACCGTCGAGGGCTATTACCACCCTTTTAGC ACGCTAGTGTTGGAGGATTC
Downstream 100 bases:
>100_bases ATCCCGGTCTTTTTTTACAAACGCCCCGCACGATCAAACGATCGGCGGGGCGTTTGCTTGGTTAAGCTGGTTGCTTATGG AATGATATACCAAACATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MAAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQADILPAVQRLINAFQTAQSTTL EIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGASSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGG GAASAQASGGGGGGGGGAASAQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSAEFTAKWKQIAARDPQGFAAA QHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSVQHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDN GRLAYFKNTSDAGVIQGLKNRFVNERKDALNMSANH
Sequences:
>Translated_436_residues MAAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQADILPAVQRLINAFQTAQSTTL EIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGASSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGG GAASAQASGGGGGGGGGAASAQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSAEFTAKWKQIAARDPQGFAAA QHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSVQHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDN GRLAYFKNTSDAGVIQGLKNRFVNERKDALNMSANH >Mature_435_residues AAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQADILPAVQRLINAFQTAQSTTLE IKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGASSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGGG AASAQASGGGGGGGGGAASAQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVSS GKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSAEFTAKWKQIAARDPQGFAAAQ HQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSVQHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDNG RLAYFKNTSDAGVIQGLKNRFVNERKDALNMSANH
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43698; Mature: 43567
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQAD CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ILPAVQRLINAFQTAQSTTLEIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGGGAASAQASGGGGGGGGGAAS CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSA CCCCCCCCCCCCCEECHHHHHHCCCCEEEEEECCHHHHHHHCCCCHHHHHHHCCCCCCCH EFTAKWKQIAARDPQGFAAAQHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSV HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC QHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDNGRLAYFKNTSDAGVIQGLKN CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH RFVNERKDALNMSANH HHHHHHHHHHCCCCCC >Mature Secondary Structure AAPIVQADFEVMDQVAQRLSKNAESVTAMQNTLKQTIEDLRSTWLGDAAVAFQKEMQAD CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ILPAVQRLINAFQTAQSTTLEIKKVLQEAEQEAANLFKGDPTGGSASTQSASSSAGGGGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SSAGGDTAAASASPSNVGVMAGGTSSASASGSGGGGGGGGGAASAQASGGGGGGGGGAAS CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQPTGQQPKATSGGGGGGGGGGGTASAQPTGGNAAAAGNASLGKLSEKYETGGRGPGTVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC SGKGDLGGASYGSYQMTSQTAIKKDGKIVFVNGGRVAEFLRNPAGAQYAEEFKGLKPGSA CCCCCCCCCCCCCEECHHHHHHCCCCEEEEEECCHHHHHHHCCCCHHHHHHHCCCCCCCH EFTAKWKQIAARDPQGFAAAQHQYIENTHYQPQVNKLKAAGFDVNNYSPAMRDVVWSTSV HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC QHGPGASVITNALRGKDLSQMSESQIINAIYTERSKTLDNGRLAYFKNTSDAGVIQGLKN CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH RFVNERKDALNMSANH HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA