Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897784

Identifier: 159897784

GI number: 159897784

Start: 1465358

End: 1466122

Strand: Direct

Name: 159897784

Synonym: Haur_1255

Alternate gene names: NA

Gene position: 1465358-1466122 (Clockwise)

Preceding gene: 159897783

Following gene: 159897785

Centisome position: 23.09

GC content: 47.71

Gene sequence:

>765_bases
ATGCCGAAGATTGTTTCCATCCATTCGTTTCGCCCAGGTACCGGTAAATCGCAATTAACTGCCAATATTGCAACAATTTT
GGCAGCCGCCGGCCAACGGGTGGCAATTATTGATAGCGATGTCCACTCGCCCTCAATCCAGTGGCTGTTTGGTTTGCCTG
AGGGCGCAATTACCCATAGCCTGAATGATTTTCTGTGGGGCAAATGTGGCATCGAATCAACCGCCGTTAATCTCAATCCA
ACGGTTCGCCATCCACTCAAGGGCCAAGTCTATTTAGTGCCATTTGCCACTCGCAATAGCACAATTGATTATGATATTAG
CCTACTCAGCGATAGTTTTGAGTTGTTGATCAATACCTTGCGGCTTGATGTGCTGCTGATCGATACGCAGCCTGGGGTGC
AATTCGCGGCGCTACCATCAATCGCCTTTTCGGATATTCAGGTGTTGGTGTTGCAGCTGCGCGAGCAAGATCTCCAAGGC
ACAGGCGTGGTGATCGATATTTCCGAGCAACTTGGCATTAGCGAAATGGTGCTGATTGTCAATCAAATTCCTGAGCATTA
TAATTTGCGCGAAGTCCAGCAAAAAATCGAGCAAATTTATCAACGCCCCGTCTTGGCTGCCTTGCCCTACGATGAATTGC
TCGCCGATTACAATCAGGCAAGTTTGTTGCTTGAACGAACTTCATCGAATATTTTTGTGGTAGAACATCCCGACCATCCA
ATCTCCCTACTTTTGACCAATGTGGCTGCAACCTTGACCGCTTAA

Upstream 100 bases:

>100_bases
GGCATTTTCGTCTTGCAATATCCCGACCATCCATTAAGCCAATCGCTGCGTGGAGTCGCCAATCGGTTAGTGTAATTTGT
GGAATGAGGGCGAGGCAACC

Downstream 100 bases:

>100_bases
TCGAACTCGGACATTGTTGTATTTGCGTAAAGGATGCTGGCTGCATGTTGAAACGGCTGGAACAAGGCTTAAAGTTACGT
CCAAATGAATGGCGTTTGGT

Product: putative cell division inhibitor minD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPKIVSIHSFRPGTGKSQLTANIATILAAAGQRVAIIDSDVHSPSIQWLFGLPEGAITHSLNDFLWGKCGIESTAVNLNP
TVRHPLKGQVYLVPFATRNSTIDYDISLLSDSFELLINTLRLDVLLIDTQPGVQFAALPSIAFSDIQVLVLQLREQDLQG
TGVVIDISEQLGISEMVLIVNQIPEHYNLREVQQKIEQIYQRPVLAALPYDELLADYNQASLLLERTSSNIFVVEHPDHP
ISLLLTNVAATLTA

Sequences:

>Translated_254_residues
MPKIVSIHSFRPGTGKSQLTANIATILAAAGQRVAIIDSDVHSPSIQWLFGLPEGAITHSLNDFLWGKCGIESTAVNLNP
TVRHPLKGQVYLVPFATRNSTIDYDISLLSDSFELLINTLRLDVLLIDTQPGVQFAALPSIAFSDIQVLVLQLREQDLQG
TGVVIDISEQLGISEMVLIVNQIPEHYNLREVQQKIEQIYQRPVLAALPYDELLADYNQASLLLERTSSNIFVVEHPDHP
ISLLLTNVAATLTA
>Mature_253_residues
PKIVSIHSFRPGTGKSQLTANIATILAAAGQRVAIIDSDVHSPSIQWLFGLPEGAITHSLNDFLWGKCGIESTAVNLNPT
VRHPLKGQVYLVPFATRNSTIDYDISLLSDSFELLINTLRLDVLLIDTQPGVQFAALPSIAFSDIQVLVLQLREQDLQGT
GVVIDISEQLGISEMVLIVNQIPEHYNLREVQQKIEQIYQRPVLAALPYDELLADYNQASLLLERTSSNIFVVEHPDHPI
SLLLTNVAATLTA

Specific function: Unknown

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010224
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27938; Mature: 27807

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVSIHSFRPGTGKSQLTANIATILAAAGQRVAIIDSDVHSPSIQWLFGLPEGAITHS
CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHH
LNDFLWGKCGIESTAVNLNPTVRHPLKGQVYLVPFATRNSTIDYDISLLSDSFELLINTL
HHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHH
RLDVLLIDTQPGVQFAALPSIAFSDIQVLVLQLREQDLQGTGVVIDISEQLGISEMVLIV
EEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHH
NQIPEHYNLREVQQKIEQIYQRPVLAALPYDELLADYNQASLLLERTSSNIFVVEHPDHP
HHCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHCCCHHEEEEEECCCCEEEEECCCCC
ISLLLTNVAATLTA
HHHHHHHHHHHHCC
>Mature Secondary Structure 
PKIVSIHSFRPGTGKSQLTANIATILAAAGQRVAIIDSDVHSPSIQWLFGLPEGAITHS
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHH
LNDFLWGKCGIESTAVNLNPTVRHPLKGQVYLVPFATRNSTIDYDISLLSDSFELLINTL
HHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHH
RLDVLLIDTQPGVQFAALPSIAFSDIQVLVLQLREQDLQGTGVVIDISEQLGISEMVLIV
EEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHH
NQIPEHYNLREVQQKIEQIYQRPVLAALPYDELLADYNQASLLLERTSSNIFVVEHPDHP
HHCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHCCCHHEEEEEECCCCEEEEECCCCC
ISLLLTNVAATLTA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]