Click here to switch to the map view.

The map label for this gene is 159897758

Identifier: 159897758

GI number: 159897758

Start: 1422206

End: 1424233

Strand: Direct

Name: 159897758

Synonym: Haur_1229

Alternate gene names: NA

Gene position: 1422206-1424233 (Clockwise)

Preceding gene: 159897756

Following gene: 159897760

Centisome position: 22.41

GC content: 49.65

Gene sequence:

>2028_bases
ATGCACACACACAATGGACGTTGGTCGCGTTCGTTAGCGGTCGGTTTTGCGGTGTTGGCGGCGTTTGTGTTAGCGCCAAT
TGCTTCGATTTCGGCCCATAGCAATCATGATCATAAGATTTATGTTGCACCATTTGGCAAAGATGAGGGTGATTGTTCGA
AGATTTGGCAGCCCTGTGCGACGATCGATTATGCGATTAGCCGCGGGACTGGCAAGGGTGATGAAATTCGGGTTGCTGCT
GGCGATTATAGCTACGATGCTCAGGCGGTTGGCTTATTGCTGAGCCGCCAGATTCCGGTGCACGGTGGTTTTAGCGCTCG
TGATAATTTCATGCAGCAGGATACCAAGGCCAATCCAACCTATATCGCTGGGATTCCTAGCCGCTACCGCGAACGCTTGG
CGGCAATTGGCTTTGCGCGGGTCGAAGATCGCGATGGTCGCAATACCCCAGAACTTGAGCGGATGCAAATTCCAACTGAA
TTGGAAACGCCAAGTGCTGCTCAGCCTTGTACCAATGGTATGGCTGGCATCTTTGAGTGCAACGGCATCGACTTCTTGGG
CAGCGTGCCGCTCTCAAGTTTTCGGGTAAATGGTAGTGGAGCCACCGATGGCAGCAACTTGTGGGGCCACGTCGATCTCA
ATACCGATCGCGAATATGCGATTATTGGGGTTAACAATGGCACTGGCGTAGTTGATGTGACTGATCCCACCAATCCGGTG
GTGATTGGCACGGTGCCAGGTAATAATTCGCAATGGCGCGAAGTTAAGGTCTATCAATATTTCAACCAAGCCCAAAATCG
CTGGAACGCCTATGCCTATCTTTCAACCGAAAATCGTACCCAAGGGTTGCAGATCGTTGATCTCAATCACTTGAGTGATC
CAACGCCTTCGGTTAGTTTGGCGGCAACCTATACCGCCGATTTTGGCTCATCGCACACTGTCTATATTAAGAATGTTGAT
TTCAGCACCAACGTAGCGTTGCCTGGTAAAACTGCGGCGTTGTATATGAACGGGGTCGGCAAAAACGGCAGTCGCTTGAG
TTCAGGTGTGTTCCGCGCCTTTGATATCAGCAATCCGTTGACTCCGCAGATTATTGATAGTGGCGTGCCGGATACCAATA
TTAGCTACACCCACGACGATACCAGCATGATCATTACCGATTCGCGGACTTCGGCATGTGCGCCTGGTCACCAAGCCTCG
TGCGAAATAATGTTTGATTTCAGCGAATCGTCGGTCGAAATTTGGGATATTACCGATTCGGCTGCCCCATTCCATATTAG
TTCACGGCCTTATTCGGGCAGTGGCTACACCCACTCAGGCTGGTATAGCGACGATAAAATGTACGTCTTTATCCAAGATG
AATTGGATGAACAAAATTTTGGCCACAACACTCGTGTGCGCACGATGGATATTCATGATCTGGATAATCCAACCATCAGC
GCGACGTGGGATGGCCCAACTCGGGCAATTGACCATAACGGCTACACGATTGGCAACAAATATTATATGTCGAACTATTT
GCGTGGTTTGACGATTCTTGACATAACCAATCCAAATAACATCCAAGAAGCCGCTTTCTTTGATACCTATCCTGGTAGCA
ATTCGGCCAGTTTTGATGGAGCTTGGGGGGTTTATCCCTACTTGCCAAGCGGCACCTTGATGATCAGCGATATTTCACGC
GGCTTGATTTTGGTGCGCGAACCAACTAGTACCCCTGATCAAGCGATTGCTGGCTTGGAAGCAACCAACGATGGCCCAAC
CGTTGCTGGCGAGGCGACCAATTTTGATGCAGCAATTCGGGCTGGTACAAACGTGACCTATGCGTGGGATTTTGGTGATG
GTACAGCTGTGGTAACTTCAACCAACACCACGATGAGTCATACCTATCCAAACGTTGGTAATTATACGGTTGAGTTAACT
GCCAGCAATGGTACTAATTCGCAAACAGCTACAACAACCGTGGTGGTGCAAGCGCCACCACAAACCGAATGGAAAATTTG
GCTGCCCTTTGCGATTCGGGCGGAATAA

Upstream 100 bases:

>100_bases
CAGCTGTTTAACATTATACACATATTAAGAATCGCGTATAATAGGGCATCTCCAAAGGCGGCCCCTGTTTTTTCCGATGG
TCCTACAGTGAGGTTCTGGC

Downstream 100 bases:

>100_bases
CGCTTAAATCCTTTGGAGATCAGCAGGCGGGGCATTTGCCCCGCCTGTTGCGTTAATTTTAGAGGGCAGTGCGTGGATGC
TGTTTGTGCCAAACCCGTTT

Product: PKD domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MHTHNGRWSRSLAVGFAVLAAFVLAPIASISAHSNHDHKIYVAPFGKDEGDCSKIWQPCATIDYAISRGTGKGDEIRVAA
GDYSYDAQAVGLLLSRQIPVHGGFSARDNFMQQDTKANPTYIAGIPSRYRERLAAIGFARVEDRDGRNTPELERMQIPTE
LETPSAAQPCTNGMAGIFECNGIDFLGSVPLSSFRVNGSGATDGSNLWGHVDLNTDREYAIIGVNNGTGVVDVTDPTNPV
VIGTVPGNNSQWREVKVYQYFNQAQNRWNAYAYLSTENRTQGLQIVDLNHLSDPTPSVSLAATYTADFGSSHTVYIKNVD
FSTNVALPGKTAALYMNGVGKNGSRLSSGVFRAFDISNPLTPQIIDSGVPDTNISYTHDDTSMIITDSRTSACAPGHQAS
CEIMFDFSESSVEIWDITDSAAPFHISSRPYSGSGYTHSGWYSDDKMYVFIQDELDEQNFGHNTRVRTMDIHDLDNPTIS
ATWDGPTRAIDHNGYTIGNKYYMSNYLRGLTILDITNPNNIQEAAFFDTYPGSNSASFDGAWGVYPYLPSGTLMISDISR
GLILVREPTSTPDQAIAGLEATNDGPTVAGEATNFDAAIRAGTNVTYAWDFGDGTAVVTSTNTTMSHTYPNVGNYTVELT
ASNGTNSQTATTTVVVQAPPQTEWKIWLPFAIRAE

Sequences:

>Translated_675_residues
MHTHNGRWSRSLAVGFAVLAAFVLAPIASISAHSNHDHKIYVAPFGKDEGDCSKIWQPCATIDYAISRGTGKGDEIRVAA
GDYSYDAQAVGLLLSRQIPVHGGFSARDNFMQQDTKANPTYIAGIPSRYRERLAAIGFARVEDRDGRNTPELERMQIPTE
LETPSAAQPCTNGMAGIFECNGIDFLGSVPLSSFRVNGSGATDGSNLWGHVDLNTDREYAIIGVNNGTGVVDVTDPTNPV
VIGTVPGNNSQWREVKVYQYFNQAQNRWNAYAYLSTENRTQGLQIVDLNHLSDPTPSVSLAATYTADFGSSHTVYIKNVD
FSTNVALPGKTAALYMNGVGKNGSRLSSGVFRAFDISNPLTPQIIDSGVPDTNISYTHDDTSMIITDSRTSACAPGHQAS
CEIMFDFSESSVEIWDITDSAAPFHISSRPYSGSGYTHSGWYSDDKMYVFIQDELDEQNFGHNTRVRTMDIHDLDNPTIS
ATWDGPTRAIDHNGYTIGNKYYMSNYLRGLTILDITNPNNIQEAAFFDTYPGSNSASFDGAWGVYPYLPSGTLMISDISR
GLILVREPTSTPDQAIAGLEATNDGPTVAGEATNFDAAIRAGTNVTYAWDFGDGTAVVTSTNTTMSHTYPNVGNYTVELT
ASNGTNSQTATTTVVVQAPPQTEWKIWLPFAIRAE
>Mature_675_residues
MHTHNGRWSRSLAVGFAVLAAFVLAPIASISAHSNHDHKIYVAPFGKDEGDCSKIWQPCATIDYAISRGTGKGDEIRVAA
GDYSYDAQAVGLLLSRQIPVHGGFSARDNFMQQDTKANPTYIAGIPSRYRERLAAIGFARVEDRDGRNTPELERMQIPTE
LETPSAAQPCTNGMAGIFECNGIDFLGSVPLSSFRVNGSGATDGSNLWGHVDLNTDREYAIIGVNNGTGVVDVTDPTNPV
VIGTVPGNNSQWREVKVYQYFNQAQNRWNAYAYLSTENRTQGLQIVDLNHLSDPTPSVSLAATYTADFGSSHTVYIKNVD
FSTNVALPGKTAALYMNGVGKNGSRLSSGVFRAFDISNPLTPQIIDSGVPDTNISYTHDDTSMIITDSRTSACAPGHQAS
CEIMFDFSESSVEIWDITDSAAPFHISSRPYSGSGYTHSGWYSDDKMYVFIQDELDEQNFGHNTRVRTMDIHDLDNPTIS
ATWDGPTRAIDHNGYTIGNKYYMSNYLRGLTILDITNPNNIQEAAFFDTYPGSNSASFDGAWGVYPYLPSGTLMISDISR
GLILVREPTSTPDQAIAGLEATNDGPTVAGEATNFDAAIRAGTNVTYAWDFGDGTAVVTSTNTTMSHTYPNVGNYTVELT
ASNGTNSQTATTTVVVQAPPQTEWKIWLPFAIRAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73268; Mature: 73268

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTHNGRWSRSLAVGFAVLAAFVLAPIASISAHSNHDHKIYVAPFGKDEGDCSKIWQPCA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCHH
TIDYAISRGTGKGDEIRVAAGDYSYDAQAVGLLLSRQIPVHGGFSARDNFMQQDTKANPT
HEEHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCE
YIAGIPSRYRERLAAIGFARVEDRDGRNTPELERMQIPTELETPSAAQPCTNGMAGIFEC
EEECCCHHHHHHHHHHCEEEEECCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEE
NGIDFLGSVPLSSFRVNGSGATDGSNLWGHVDLNTDREYAIIGVNNGTGVVDVTDPTNPV
CCCCEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCCCCCE
VIGTVPGNNSQWREVKVYQYFNQAQNRWNAYAYLSTENRTQGLQIVDLNHLSDPTPSVSL
EEEEECCCCCCCEEEEHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
AATYTADFGSSHTVYIKNVDFSTNVALPGKTAALYMNGVGKNGSRLSSGVFRAFDISNPL
EEEEEECCCCCCEEEEEECCCCCCEECCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCC
TPQIIDSGVPDTNISYTHDDTSMIITDSRTSACAPGHQASCEIMFDFSESSVEIWDITDS
CHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
AAPFHISSRPYSGSGYTHSGWYSDDKMYVFIQDELDEQNFGHNTRVRTMDIHDLDNPTIS
CCCEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEE
ATWDGPTRAIDHNGYTIGNKYYMSNYLRGLTILDITNPNNIQEAAFFDTYPGSNSASFDG
EECCCCCEEECCCCEEECCCHHHHHHCCCEEEEEECCCCCCCHHEEEECCCCCCCCCCCC
AWGVYPYLPSGTLMISDISRGLILVREPTSTPDQAIAGLEATNDGPTVAGEATNFDAAIR
CCCCCEECCCCEEEEEECCCCEEEEECCCCCHHHHHCCCEECCCCCEEECCCCCCCCEEE
AGTNVTYAWDFGDGTAVVTSTNTTMSHTYPNVGNYTVELTASNGTNSQTATTTVVVQAPP
CCCCEEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECCC
QTEWKIWLPFAIRAE
CCCEEEEEEEEEECC
>Mature Secondary Structure
MHTHNGRWSRSLAVGFAVLAAFVLAPIASISAHSNHDHKIYVAPFGKDEGDCSKIWQPCA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHCCHH
TIDYAISRGTGKGDEIRVAAGDYSYDAQAVGLLLSRQIPVHGGFSARDNFMQQDTKANPT
HEEHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCE
YIAGIPSRYRERLAAIGFARVEDRDGRNTPELERMQIPTELETPSAAQPCTNGMAGIFEC
EEECCCHHHHHHHHHHCEEEEECCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEE
NGIDFLGSVPLSSFRVNGSGATDGSNLWGHVDLNTDREYAIIGVNNGTGVVDVTDPTNPV
CCCCEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCCCCCE
VIGTVPGNNSQWREVKVYQYFNQAQNRWNAYAYLSTENRTQGLQIVDLNHLSDPTPSVSL
EEEEECCCCCCCEEEEHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
AATYTADFGSSHTVYIKNVDFSTNVALPGKTAALYMNGVGKNGSRLSSGVFRAFDISNPL
EEEEEECCCCCCEEEEEECCCCCCEECCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCC
TPQIIDSGVPDTNISYTHDDTSMIITDSRTSACAPGHQASCEIMFDFSESSVEIWDITDS
CHHHHHCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
AAPFHISSRPYSGSGYTHSGWYSDDKMYVFIQDELDEQNFGHNTRVRTMDIHDLDNPTIS
CCCEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEE
ATWDGPTRAIDHNGYTIGNKYYMSNYLRGLTILDITNPNNIQEAAFFDTYPGSNSASFDG
EECCCCCEEECCCCEEECCCHHHHHHCCCEEEEEECCCCCCCHHEEEECCCCCCCCCCCC
AWGVYPYLPSGTLMISDISRGLILVREPTSTPDQAIAGLEATNDGPTVAGEATNFDAAIR
CCCCCEECCCCEEEEEECCCCEEEEECCCCCHHHHHCCCEECCCCCEEECCCCCCCCEEE
AGTNVTYAWDFGDGTAVVTSTNTTMSHTYPNVGNYTVELTASNGTNSQTATTTVVVQAPP
CCCCEEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECCC
QTEWKIWLPFAIRAE
CCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA