| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is thrC [H]
Identifier: 159897747
GI number: 159897747
Start: 1409294
End: 1410931
Strand: Direct
Name: thrC [H]
Synonym: Haur_1218
Alternate gene names: 159897747
Gene position: 1409294-1410931 (Clockwise)
Preceding gene: 159897746
Following gene: 159897748
Centisome position: 22.21
GC content: 50.37
Gene sequence:
>1638_bases ATGACAGATTTAGTTTGCCAGAACTGTGGCCATATTCAGCCATACACCTTTCGTAGCTCGAATAGCTGTGCCCAATGTGC TAATGATTGGCTTGAGACGCATTACGATTATGCCAACTTTTGCGAGTTGGTGCGTAATCAGCAACTGAGCGGCCAGACGT TATGGCGCTATAGTAGCGTTTTGCCGGTGCCGCCACCAGCTGCGCCAACCCATGTTGGTGGAACGCCCTTGTTGCATGCC CAGCGCTTTGGTGGTTTGTTGGGCTTGCCACGCTTGTATATTAAAGATGAGCGCTATAGCCCAACCAATTCGTTTAAAGA TCGCCAAGCAGCTTTGGCCGTAGCCGCCTTAGTTTCGAATGATATTCGCGAATGCGTGATTGCCTCGACTGGCAATGCGG CGGTGGCCTATGCCTCGGCTTGTGCCGCAGTTGGCATCAAACTGTGGGTCTTTATGACCAGCGTGGTGCCAGAAGCAAAA TTACGCGAAGCGGCCTTGTTTGGGGCTGAGGTGATCAAAGTTAGTGGCAATTATGATCAAACTAAGCAGATTGCCGCTGA TTTTGCCCAAAACCGCAATATCATCTACGATCGTGGCGCTAACAGCATTCCGGCGCGGGAAGCCATGAAAACGATCAGCT ACGAAATTTGCGAGCAACTTGGCTGGCAAGCGCCCGATTGGTATATTCAGGCAGTTAGTGGTGGCTTGGGGCCATTAGGG GTTTATCACGGGTTTGCCGAATTGCATGCCATGGGCTTGACCCAGCGCGTACCTCAAACCGCGATTATTCAAGCTGAAGG CTGCTCACCGATGGTGCAGGCATTTCAGGCTGGCAAATCGGTGGCTGAAAAAGTTGTACCAAATACGCGGATTGCGATTC TTTCAACAGGCGATCCTGGTAAGATCTATACGCGGCTTTGGCAACGCATCCAAACATCGGGCGGTACGATGGAAGCCGTC ACCGATGAAGAGGCCTTCAGTGCAATGCGCTTATTGGCGCGAACTGAAGGTATTTCGGTGGAGCCAGCTACGGCTGTGGC ATTTGCGGGCCTGCAAAAAATGGTGGCCCAAGGCCAAGTTAACCCTGAAGAATTAATTGTGGTAAATTGTACTGGGCACA CCTTCCCAGTCGATAAGCATGTGCTGAACGATCAATGGCATATTGATGTACATGTCAGCGATACCCAACAATCAGCGCCC CAAGAAGGGCTTCAGGTGGCGCTGGAACAATTGAATGAAAAAGCGACAACGGTGTTGTTGATCGACGATAATCCTGATGA TGCTCAATTGGTGCAGCGTATTTTAGAGCGACGCAAAGCCTACCGCGTTTATCGGGCAACCGATGGTGCCGATGGTGTGC AACAAGCAATTCAACGGCTGCCTGATGCTATTGTGATGGATTTAATGATGCCAAATATGGATGGGTTTCAGGTGATGAGT ACCTTACGCCAACACCCCAAAACCCGTGATATTCCGATTATTGTGGTGAGCGCCAAGGATATTACGCCTGATGAGCGCCA TCATTTAGCCACCCATACCCGTGCTGTGTATCAAAAAGGCTCACTTTCACCAGTTGCCTTTGTCGAACAGGTTGTGAGTG TCATTGAACACAAAGAGCGTGATAGTGAGGACCAATGA
Upstream 100 bases:
>100_bases GATGAAGTTAATCCTAATGCAGCGCCAGCCAATCAACCTATGTCTGTAGAATAATGGTTATGCGCATTGTGCTGCGGCAT AAGCGCGTGGTAAGGGCGTT
Downstream 100 bases:
>100_bases GTACAACCGTTGTCTTATATATCGAAGATAACCCTGATAATATGCTGTTGGTGGAGCGCCTGTTGATTGCCCGTGGTTGT CAAATGCTCAAGGCAATCAA
Product: response regulator receiver protein
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTDLVCQNCGHIQPYTFRSSNSCAQCANDWLETHYDYANFCELVRNQQLSGQTLWRYSSVLPVPPPAAPTHVGGTPLLHA QRFGGLLGLPRLYIKDERYSPTNSFKDRQAALAVAALVSNDIRECVIASTGNAAVAYASACAAVGIKLWVFMTSVVPEAK LREAALFGAEVIKVSGNYDQTKQIAADFAQNRNIIYDRGANSIPAREAMKTISYEICEQLGWQAPDWYIQAVSGGLGPLG VYHGFAELHAMGLTQRVPQTAIIQAEGCSPMVQAFQAGKSVAEKVVPNTRIAILSTGDPGKIYTRLWQRIQTSGGTMEAV TDEEAFSAMRLLARTEGISVEPATAVAFAGLQKMVAQGQVNPEELIVVNCTGHTFPVDKHVLNDQWHIDVHVSDTQQSAP QEGLQVALEQLNEKATTVLLIDDNPDDAQLVQRILERRKAYRVYRATDGADGVQQAIQRLPDAIVMDLMMPNMDGFQVMS TLRQHPKTRDIPIIVVSAKDITPDERHHLATHTRAVYQKGSLSPVAFVEQVVSVIEHKERDSEDQ
Sequences:
>Translated_545_residues MTDLVCQNCGHIQPYTFRSSNSCAQCANDWLETHYDYANFCELVRNQQLSGQTLWRYSSVLPVPPPAAPTHVGGTPLLHA QRFGGLLGLPRLYIKDERYSPTNSFKDRQAALAVAALVSNDIRECVIASTGNAAVAYASACAAVGIKLWVFMTSVVPEAK LREAALFGAEVIKVSGNYDQTKQIAADFAQNRNIIYDRGANSIPAREAMKTISYEICEQLGWQAPDWYIQAVSGGLGPLG VYHGFAELHAMGLTQRVPQTAIIQAEGCSPMVQAFQAGKSVAEKVVPNTRIAILSTGDPGKIYTRLWQRIQTSGGTMEAV TDEEAFSAMRLLARTEGISVEPATAVAFAGLQKMVAQGQVNPEELIVVNCTGHTFPVDKHVLNDQWHIDVHVSDTQQSAP QEGLQVALEQLNEKATTVLLIDDNPDDAQLVQRILERRKAYRVYRATDGADGVQQAIQRLPDAIVMDLMMPNMDGFQVMS TLRQHPKTRDIPIIVVSAKDITPDERHHLATHTRAVYQKGSLSPVAFVEQVVSVIEHKERDSEDQ >Mature_544_residues TDLVCQNCGHIQPYTFRSSNSCAQCANDWLETHYDYANFCELVRNQQLSGQTLWRYSSVLPVPPPAAPTHVGGTPLLHAQ RFGGLLGLPRLYIKDERYSPTNSFKDRQAALAVAALVSNDIRECVIASTGNAAVAYASACAAVGIKLWVFMTSVVPEAKL REAALFGAEVIKVSGNYDQTKQIAADFAQNRNIIYDRGANSIPAREAMKTISYEICEQLGWQAPDWYIQAVSGGLGPLGV YHGFAELHAMGLTQRVPQTAIIQAEGCSPMVQAFQAGKSVAEKVVPNTRIAILSTGDPGKIYTRLWQRIQTSGGTMEAVT DEEAFSAMRLLARTEGISVEPATAVAFAGLQKMVAQGQVNPEELIVVNCTGHTFPVDKHVLNDQWHIDVHVSDTQQSAPQ EGLQVALEQLNEKATTVLLIDDNPDDAQLVQRILERRKAYRVYRATDGADGVQQAIQRLPDAIVMDLMMPNMDGFQVMST LRQHPKTRDIPIIVVSAKDITPDERHHLATHTRAVYQKGSLSPVAFVEQVVSVIEHKERDSEDQ
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 59863; Mature: 59731
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLVCQNCGHIQPYTFRSSNSCAQCANDWLETHYDYANFCELVRNQQLSGQTLWRYSSV CCCCHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCC LPVPPPAAPTHVGGTPLLHAQRFGGLLGLPRLYIKDERYSPTNSFKDRQAALAVAALVSN CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH DIRECVIASTGNAAVAYASACAAVGIKLWVFMTSVVPEAKLREAALFGAEVIKVSGNYDQ HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCH TKQIAADFAQNRNIIYDRGANSIPAREAMKTISYEICEQLGWQAPDWYIQAVSGGLGPLG HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHH VYHGFAELHAMGLTQRVPQTAIIQAEGCSPMVQAFQAGKSVAEKVVPNTRIAILSTGDPG HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH KIYTRLWQRIQTSGGTMEAVTDEEAFSAMRLLARTEGISVEPATAVAFAGLQKMVAQGQV HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC NPEELIVVNCTGHTFPVDKHVLNDQWHIDVHVSDTQQSAPQEGLQVALEQLNEKATTVLL CHHHEEEEEECCCCCCCCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHCCCCEEEEE IDDNPDDAQLVQRILERRKAYRVYRATDGADGVQQAIQRLPDAIVMDLMMPNMDGFQVMS EECCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH TLRQHPKTRDIPIIVVSAKDITPDERHHLATHTRAVYQKGSLSPVAFVEQVVSVIEHKER HHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC DSEDQ CCCCC >Mature Secondary Structure TDLVCQNCGHIQPYTFRSSNSCAQCANDWLETHYDYANFCELVRNQQLSGQTLWRYSSV CCCHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCC LPVPPPAAPTHVGGTPLLHAQRFGGLLGLPRLYIKDERYSPTNSFKDRQAALAVAALVSN CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH DIRECVIASTGNAAVAYASACAAVGIKLWVFMTSVVPEAKLREAALFGAEVIKVSGNYDQ HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCH TKQIAADFAQNRNIIYDRGANSIPAREAMKTISYEICEQLGWQAPDWYIQAVSGGLGPLG HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHH VYHGFAELHAMGLTQRVPQTAIIQAEGCSPMVQAFQAGKSVAEKVVPNTRIAILSTGDPG HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH KIYTRLWQRIQTSGGTMEAVTDEEAFSAMRLLARTEGISVEPATAVAFAGLQKMVAQGQV HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC NPEELIVVNCTGHTFPVDKHVLNDQWHIDVHVSDTQQSAPQEGLQVALEQLNEKATTVLL CHHHEEEEEECCCCCCCCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHCCCCEEEEE IDDNPDDAQLVQRILERRKAYRVYRATDGADGVQQAIQRLPDAIVMDLMMPNMDGFQVMS EECCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH TLRQHPKTRDIPIIVVSAKDITPDERHHLATHTRAVYQKGSLSPVAFVEQVVSVIEHKER HHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC DSEDQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]