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The map label for this gene is yhbO [H]

Identifier: 159897361

GI number: 159897361

Start: 943368

End: 943928

Strand: Direct

Name: yhbO [H]

Synonym: Haur_0832

Alternate gene names: 159897361

Gene position: 943368-943928 (Clockwise)

Preceding gene: 159897360

Following gene: 159897365

Centisome position: 14.86

GC content: 50.8

Gene sequence:

>561_bases
ATGAGTCAGCATTTAAATGGTAAACGGGTAGCGATTATTGCAACTGATGGCTTTGAGCAGAGCGAGCTTGAAGAACCCAA
AGCGGCCTTAGAGCAAGCCGGAGCCAAAACCCATGTCATTTCGCTCAAGGCTGGCACGATTCGCGGCTGGAAAGAGCAAG
ATTGGGGCAGCGAGGTTGCTGTCGATTACACGCTTGAACAAGTCAACCCTGCTGATTATGATGGGTTGTTGTTGCCTGGT
GGCGTGATGAACCCCGATAAACTGCGGCGCGAAACCAGCGTTTTGAATTTTGTACGAGCCATGGCTGAAGCTGGCAAGCC
AATTGCCGCCATTTGCCATGGCCCATGGACGCTGATCGATGCTGGAATCGCCAAAGGCCGCATGCTCACATCGTACCCAA
CCTTGCAAAACGACCTGAAAAATGCTGGAGCCGAGTGGGTTGATCGCGAAGTCGTGGTCGATAATGGCCTGGTGACTAGC
CGCAATCCCCAAGATATTCCGGCCTTCAATCGCAAATTTATTGAAGAATTAGGCGAAGGTTTACATAAACAAGTTGGCTA
A

Upstream 100 bases:

>100_bases
GCCTTGATCACGGTTGATTGAGGCGTAGCATAGCTTCTGTGGCCTGATTCTTGCCTTAACCTAGGCATAGAATAGTGGTG
TAACAGGAGGTATGCAACGG

Downstream 100 bases:

>100_bases
TAACCTGCATGGTTAACAATGGCCCCATAGCTTTATCCTAGGCTGCGGGGCCATTTCATTTAAGCAATTGTTGGAATTGG
ATCGTTGCTCCAAATCGCTG

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSQHLNGKRVAIIATDGFEQSELEEPKAALEQAGAKTHVISLKAGTIRGWKEQDWGSEVAVDYTLEQVNPADYDGLLLPG
GVMNPDKLRRETSVLNFVRAMAEAGKPIAAICHGPWTLIDAGIAKGRMLTSYPTLQNDLKNAGAEWVDREVVVDNGLVTS
RNPQDIPAFNRKFIEELGEGLHKQVG

Sequences:

>Translated_186_residues
MSQHLNGKRVAIIATDGFEQSELEEPKAALEQAGAKTHVISLKAGTIRGWKEQDWGSEVAVDYTLEQVNPADYDGLLLPG
GVMNPDKLRRETSVLNFVRAMAEAGKPIAAICHGPWTLIDAGIAKGRMLTSYPTLQNDLKNAGAEWVDREVVVDNGLVTS
RNPQDIPAFNRKFIEELGEGLHKQVG
>Mature_185_residues
SQHLNGKRVAIIATDGFEQSELEEPKAALEQAGAKTHVISLKAGTIRGWKEQDWGSEVAVDYTLEQVNPADYDGLLLPGG
VMNPDKLRRETSVLNFVRAMAEAGKPIAAICHGPWTLIDAGIAKGRMLTSYPTLQNDLKNAGAEWVDREVVVDNGLVTSR
NPQDIPAFNRKFIEELGEGLHKQVG

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=174, Percent_Identity=44.8275862068966, Blast_Score=149, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17531319, Length=122, Percent_Identity=31.1475409836066, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571932, Length=183, Percent_Identity=31.1475409836066, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24653499, Length=117, Percent_Identity=36.7521367521368, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20302; Mature: 20171

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHLNGKRVAIIATDGFEQSELEEPKAALEQAGAKTHVISLKAGTIRGWKEQDWGSEVA
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEE
VDYTLEQVNPADYDGLLLPGGVMNPDKLRRETSVLNFVRAMAEAGKPIAAICHGPWTLID
EEEEHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
AGIAKGRMLTSYPTLQNDLKNAGAEWVDREVVVDNGLVTSRNPQDIPAFNRKFIEELGEG
HHHHCCCEEECCCHHHHHHHHCCHHHHCCEEEECCCEECCCCCCCCCHHHHHHHHHHHHH
LHKQVG
HHHHCC
>Mature Secondary Structure 
SQHLNGKRVAIIATDGFEQSELEEPKAALEQAGAKTHVISLKAGTIRGWKEQDWGSEVA
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEE
VDYTLEQVNPADYDGLLLPGGVMNPDKLRRETSVLNFVRAMAEAGKPIAAICHGPWTLID
EEEEHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
AGIAKGRMLTSYPTLQNDLKNAGAEWVDREVVVDNGLVTSRNPQDIPAFNRKFIEELGEG
HHHHCCCEEECCCHHHHHHHHCCHHHHCCEEEECCCEECCCCCCCCCHHHHHHHHHHHHH
LHKQVG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]