Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897236

Identifier: 159897236

GI number: 159897236

Start: 813568

End: 814254

Strand: Reverse

Name: 159897236

Synonym: Haur_0707

Alternate gene names: NA

Gene position: 814254-813568 (Counterclockwise)

Preceding gene: 159897237

Following gene: 159897232

Centisome position: 12.83

GC content: 49.93

Gene sequence:

>687_bases
ATGATTTGTAGCGCGTGCCAAGCCAACATTCGGGATACAGCTCAGCATTGTACTGCCTGTGGTGCAAAAATTAATCAGCC
AAGTGCCGCAACTGGACCATTGCCGCAAGCCAAACTAGCCAAACCACGGCGGCGCTGGGTTAAATCATGGTGGAGTTTTA
TTCTGGGCGTTCTAAGTACAGGCTTGATCTTGCCGCTCATCGGGATTATCGCTTTGTGGATTTTTGGCGGCACGAATGAG
GCTCGCACGCCGTCGCCAGTACCCGACGAACGACCTGATATCAGCGTCGATATTGATCATAGCTATATCGAACAAGCGAT
TGCGACCAACCCTGATTTTCAAAATCCCCAAGTGATTTTGGGCAATCATCCCAAGGGCGGGGTGGCAATGACTGTCACGC
TAGGCTACCCATTGCCCTTGGTTGGCGTGCAAGATATTCAAGCCCGTACCCAAATTGCCGCGATCGATGGCAAGTTGGTG
GTAACAACCGAACATGTTGGTCTAGGTGAAAATGGTCGGCTGAGCATCCCAGGCTCGATCATTGAAAATATGCTTAGCTC
AACCCTCAACCAAGAGATTGATAAGCGCCTGCGTTCAAATCCACAGCTGGAGATTGCAATCATCAACACAAGTACCAGTA
ATCAGGTCTTGCGGGTAGCCGCAATTATCACCACCAAACCAAAGTAA

Upstream 100 bases:

>100_bases
TTTTTGCCGTTTATTATTTACCGCCTTGTAATTGCAGCGGTGATTGTGGCCGTCTATCTCGCCCGCTAACTATTCTGGCG
CAATCCGTGCAGGAGGAAGC

Downstream 100 bases:

>100_bases
AACCCTTCTCCTAGGAGCGAGAGAAGGGTTTGCTTGGCAAGTTTGGTTATTCGGTAACCTCAACCTCAATTAAAAAGAGT
TGGTTGGGGTCAGCATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLSTGLILPLIGIIALWIFGGTNE
ARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVILGNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLV
VTTEHVGLGENGRLSIPGSIIENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK

Sequences:

>Translated_228_residues
MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLSTGLILPLIGIIALWIFGGTNE
ARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVILGNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLV
VTTEHVGLGENGRLSIPGSIIENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK
>Mature_228_residues
MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLSTGLILPLIGIIALWIFGGTNE
ARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVILGNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLV
VTTEHVGLGENGRLSIPGSIIENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24522; Mature: 24522

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLST
CCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
GLILPLIGIIALWIFGGTNEARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVIL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCEEEE
GNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLVVTTEHVGLGENGRLSIPGSI
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCEECCHHH
IENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCC
>Mature Secondary Structure
MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLST
CCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
GLILPLIGIIALWIFGGTNEARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVIL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCEEEE
GNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLVVTTEHVGLGENGRLSIPGSI
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCEECCHHH
IENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA