| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897236
Identifier: 159897236
GI number: 159897236
Start: 813568
End: 814254
Strand: Reverse
Name: 159897236
Synonym: Haur_0707
Alternate gene names: NA
Gene position: 814254-813568 (Counterclockwise)
Preceding gene: 159897237
Following gene: 159897232
Centisome position: 12.83
GC content: 49.93
Gene sequence:
>687_bases ATGATTTGTAGCGCGTGCCAAGCCAACATTCGGGATACAGCTCAGCATTGTACTGCCTGTGGTGCAAAAATTAATCAGCC AAGTGCCGCAACTGGACCATTGCCGCAAGCCAAACTAGCCAAACCACGGCGGCGCTGGGTTAAATCATGGTGGAGTTTTA TTCTGGGCGTTCTAAGTACAGGCTTGATCTTGCCGCTCATCGGGATTATCGCTTTGTGGATTTTTGGCGGCACGAATGAG GCTCGCACGCCGTCGCCAGTACCCGACGAACGACCTGATATCAGCGTCGATATTGATCATAGCTATATCGAACAAGCGAT TGCGACCAACCCTGATTTTCAAAATCCCCAAGTGATTTTGGGCAATCATCCCAAGGGCGGGGTGGCAATGACTGTCACGC TAGGCTACCCATTGCCCTTGGTTGGCGTGCAAGATATTCAAGCCCGTACCCAAATTGCCGCGATCGATGGCAAGTTGGTG GTAACAACCGAACATGTTGGTCTAGGTGAAAATGGTCGGCTGAGCATCCCAGGCTCGATCATTGAAAATATGCTTAGCTC AACCCTCAACCAAGAGATTGATAAGCGCCTGCGTTCAAATCCACAGCTGGAGATTGCAATCATCAACACAAGTACCAGTA ATCAGGTCTTGCGGGTAGCCGCAATTATCACCACCAAACCAAAGTAA
Upstream 100 bases:
>100_bases TTTTTGCCGTTTATTATTTACCGCCTTGTAATTGCAGCGGTGATTGTGGCCGTCTATCTCGCCCGCTAACTATTCTGGCG CAATCCGTGCAGGAGGAAGC
Downstream 100 bases:
>100_bases AACCCTTCTCCTAGGAGCGAGAGAAGGGTTTGCTTGGCAAGTTTGGTTATTCGGTAACCTCAACCTCAATTAAAAAGAGT TGGTTGGGGTCAGCATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLSTGLILPLIGIIALWIFGGTNE ARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVILGNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLV VTTEHVGLGENGRLSIPGSIIENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK
Sequences:
>Translated_228_residues MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLSTGLILPLIGIIALWIFGGTNE ARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVILGNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLV VTTEHVGLGENGRLSIPGSIIENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK >Mature_228_residues MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLSTGLILPLIGIIALWIFGGTNE ARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVILGNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLV VTTEHVGLGENGRLSIPGSIIENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24522; Mature: 24522
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLST CCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH GLILPLIGIIALWIFGGTNEARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVIL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCEEEE GNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLVVTTEHVGLGENGRLSIPGSI CCCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCEECCHHH IENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCC >Mature Secondary Structure MICSACQANIRDTAQHCTACGAKINQPSAATGPLPQAKLAKPRRRWVKSWWSFILGVLST CCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH GLILPLIGIIALWIFGGTNEARTPSPVPDERPDISVDIDHSYIEQAIATNPDFQNPQVIL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCEEEE GNHPKGGVAMTVTLGYPLPLVGVQDIQARTQIAAIDGKLVVTTEHVGLGENGRLSIPGSI CCCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCEECCHHH IENMLSSTLNQEIDKRLRSNPQLEIAIINTSTSNQVLRVAAIITTKPK HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA