| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897215
Identifier: 159897215
GI number: 159897215
Start: 790176
End: 790478
Strand: Reverse
Name: 159897215
Synonym: Haur_0686
Alternate gene names: NA
Gene position: 790478-790176 (Counterclockwise)
Preceding gene: 159897217
Following gene: 159897214
Centisome position: 12.46
GC content: 48.18
Gene sequence:
>303_bases ATGCAAACCGAACGTGTTAAAAGCCGTGGGGTCTTGCTCAAATTAGCAAGCCATATAGTCCAATTAGCCGTGATTGTTCG CGAAGCTGAAGGCATCAACGATAACGATGCCTACATGGTTGCTGAAGAAATTATCAACCATGTCAGTGCTGCGCATCAAG TACCAAGCCAAGATTGCTGGCCAGTGCAAACCGTTTGTCGTGCCTGGCAAATTGTTGTACAACGCCAACCAGCCTGTCGG TGTGCCGATATGAACAGCGTCGCCGATAAATTGGTCAAGCTCGATTGGGTTGCTGTCAACTAA
Upstream 100 bases:
>100_bases TACCATTCCGTACCGCTATTTTTATTGATTTTTACGCATACCATTCGTGGTATTTGCCATAAACGTCCTATCAATCCTTC GTGCCAAAGGATCGCAGAAC
Downstream 100 bases:
>100_bases ATTTCGGCAATTTCCCTCAATTTCATCGACTCCATGCCAAAAATCGCCAACATGTGGCTCTAACTCCCGATAGCAGCTTG TTATGGGGGTGTCATTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MQTERVKSRGVLLKLASHIVQLAVIVREAEGINDNDAYMVAEEIINHVSAAHQVPSQDCWPVQTVCRAWQIVVQRQPACR CADMNSVADKLVKLDWVAVN
Sequences:
>Translated_100_residues MQTERVKSRGVLLKLASHIVQLAVIVREAEGINDNDAYMVAEEIINHVSAAHQVPSQDCWPVQTVCRAWQIVVQRQPACR CADMNSVADKLVKLDWVAVN >Mature_100_residues MQTERVKSRGVLLKLASHIVQLAVIVREAEGINDNDAYMVAEEIINHVSAAHQVPSQDCWPVQTVCRAWQIVVQRQPACR CADMNSVADKLVKLDWVAVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11179; Mature: 11179
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTERVKSRGVLLKLASHIVQLAVIVREAEGINDNDAYMVAEEIINHVSAAHQVPSQDCW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC PVQTVCRAWQIVVQRQPACRCADMNSVADKLVKLDWVAVN CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECC >Mature Secondary Structure MQTERVKSRGVLLKLASHIVQLAVIVREAEGINDNDAYMVAEEIINHVSAAHQVPSQDCW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC PVQTVCRAWQIVVQRQPACRCADMNSVADKLVKLDWVAVN CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA